TomoSeq data search

Data search

Results for MligTC455_33885

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33885	4168	86.84	Mlig455_041304	Neo: - Age: -	GNL2	Mlig455_041304 {REF} {Length: 2265} {TRANSSPLICED} {Pfam: NGP1NT (NUC091) domain [PF08153.14, score=164.3]; 50S ribosome-binding GTPase [PF01926.25, score=61.7]; Ferrous iron transport protein B [PF02421.20, score=21.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.7]} {Human: ENSG00000134697, GNL2, G protein nucleolar 2, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000028869, Gnl2, guanine nucleotide binding protein-like 2 (nucleolar), [Score=591, Expect=0.0]} {Dmel: FBgn0034243, Ns2, Nucleostemin 2, [RH, Score=591, Expect=0.0]} {Celegans: WBGene00003596, ngp-1, Nucleolar GTP-binding protein 2, [RH, Score=526, Expect=2e-179]} {Smed: dd_Smed_v6_1134_0_1, dd_Smed_v6_1134_0_1, [RH, Score=300, Expect=6e-95]} {RNA1509_462} {RNA1310_10692.1, RNA1509_462} {RNA1509_462, RNA815_3805}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33885

4168

86.84

Mlig455_041304

Neo: -

Age: -

GNL2

Mlig455_041304 {REF} {Length: 2265} {TRANSSPLICED} {Pfam: NGP1NT (NUC091) domain [PF08153.14, score=164.3]; 50S ribosome-binding GTPase [PF01926.25, score=61.7]; Ferrous iron transport protein B [PF02421.20, score=21.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.7]} {Human: ENSG00000134697, GNL2, G protein nucleolar 2, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000028869, Gnl2, guanine nucleotide binding protein-like 2 (nucleolar), [Score=591, Expect=0.0]} {Dmel: FBgn0034243, Ns2, Nucleostemin 2, [RH, Score=591, Expect=0.0]} {Celegans: WBGene00003596, ngp-1, Nucleolar GTP-binding protein 2, [RH, Score=526, Expect=2e-179]} {Smed: dd_Smed_v6_1134_0_1, dd_Smed_v6_1134_0_1, [RH, Score=300, Expect=6e-95]} {RNA1509_462} {RNA1310_10692.1, RNA1509_462} {RNA1509_462, RNA815_3805}

Cumulative graph for MligTC455_33885

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.33	6.562	0.56625	1.00000
RegionR2	-0.196	6.562	0.54360	0.91040
RegionR3	0.008	6.562	0.97528	1.00000
RegionR4	0.167	6.562	0.59029	0.90523
RegionR5	-0.231	6.562	0.37427	0.72749
RegionR6	-0.034	6.562	0.89893	1.00000
RegionR7	0.685	6.562	0.01368	0.20821
RegionR8	-0.071	6.562	0.84513	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.428	6.562	0.55767	1.00000
RegenerationR2	0.489	6.562	0.11897	0.53678
RegenerationR3	0.272	6.562	0.40962	0.80809
RegenerationR4	0.359	6.562	0.29011	0.73423
RegenerationR5	0.029	6.562	0.92745	1.00000
RegenerationR6	0.506	6.562	0.12356	0.43213
RegenerationBL	-0.144	6.562	0.66135	0.99579
RegenerationTP	-0.627	6.562	0.08366	0.45843

Genes with expression patterns similar to MligTC455_33885

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33885	4168	86.84	Mlig455_041304	Neo: - Age: -	GNL2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041304 {REF} {Length: 2265} {TRANSSPLICED} {Pfam: NGP1NT (NUC091) domain [PF08153.14, score=164.3]; 50S ribosome-binding GTPase [PF01926.25, score=61.7]; Ferrous iron transport protein B [PF02421.20, score=21.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.7]} {Human: ENSG00000134697, GNL2, G protein nucleolar 2, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000028869, Gnl2, guanine nucleotide binding protein-like 2 (nucleolar), [Score=591, Expect=0.0]} {Dmel: FBgn0034243, Ns2, Nucleostemin 2, [RH, Score=591, Expect=0.0]} {Celegans: WBGene00003596, ngp-1, Nucleolar GTP-binding protein 2, [RH, Score=526, Expect=2e-179]} {Smed: dd_Smed_v6_1134_0_1, dd_Smed_v6_1134_0_1, [RH, Score=300, Expect=6e-95]} {RNA1509_462} {RNA1310_10692.1, RNA1509_462} {RNA1509_462, RNA815_3805}
2.	MligTC455_33886	4201	87.52	Mlig455_056206	Neo: - Age: Down-Down-Up	GNL2	5.976	0.992	0.998	0.992	0.999	0.997	0.998	Mlig455_056206 {REF} {Length: 2281} {TRANSSPLICED} {Pfam: NGP1NT (NUC091) domain [PF08153.14, score=164.8]; 50S ribosome-binding GTPase [PF01926.25, score=62.0]; Ferrous iron transport protein B [PF02421.20, score=22.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.5]} {Human: ENSG00000134697, GNL2, G protein nucleolar 2, [RH, Score=592, Expect=0.0]} {Mouse: ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [Score=169, Expect=1e-44]; ENSMUSG00000042354, Gnl3, guanine nucleotide binding protein-like 3 (nucleolar), [Score=169, Expect=9e-45]} {Dmel: FBgn0034243, Ns2, Nucleostemin 2, [RH, Score=585, Expect=0.0]} {Celegans: WBGene00003596, ngp-1, Nucleolar GTP-binding protein 2, [RH, Score=523, Expect=3e-178]} {Smed: dd_Smed_v6_1134_0_1, dd_Smed_v6_1134_0_1, [RH, Score=298, Expect=4e-94]} {RNA1509_27506, RNA1509_462} {RNA1310_10692.1, RNA1509_27506} {RNA1509_27506, RNA815_3805}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_33885

4168

86.84

Mlig455_041304

Neo: -

Age: -

GNL2

1.000

MligTC455_33886

4201

87.52

Mlig455_056206

Neo: -

Age: Down-Down-Up

GNL2

5.976

0.992

0.998

0.992

0.999

0.997

0.998

Mlig455_056206 {REF} {Length: 2281} {TRANSSPLICED} {Pfam: NGP1NT (NUC091) domain [PF08153.14, score=164.8]; 50S ribosome-binding GTPase [PF01926.25, score=62.0]; Ferrous iron transport protein B [PF02421.20, score=22.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.5]} {Human: ENSG00000134697, GNL2, G protein nucleolar 2, [RH, Score=592, Expect=0.0]} {Mouse: ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [Score=169, Expect=1e-44]; ENSMUSG00000042354, Gnl3, guanine nucleotide binding protein-like 3 (nucleolar), [Score=169, Expect=9e-45]} {Dmel: FBgn0034243, Ns2, Nucleostemin 2, [RH, Score=585, Expect=0.0]} {Celegans: WBGene00003596, ngp-1, Nucleolar GTP-binding protein 2, [RH, Score=523, Expect=3e-178]} {Smed: dd_Smed_v6_1134_0_1, dd_Smed_v6_1134_0_1, [RH, Score=298, Expect=4e-94]} {RNA1509_27506, RNA1509_462} {RNA1310_10692.1, RNA1509_27506} {RNA1509_27506, RNA815_3805}