Data search


search
Exact
Search

Results for MligTC455_33961

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33961 2014 41.95 Mlig455_059516

Neo: -

Age: -

HPRT1 Mlig455_059516 {REF} {Length: 1578} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=90.0]; Uracil phosphoribosyltransferase [PF14681.8, score=21.1]} {Human: ENSG00000165704, HPRT1, hypoxanthine phosphoribosyltransferase 1, [RH, Score=210, Expect=3e-68]; ENSG00000099256, PRTFDC1, phosphoribosyl transferase domain containing 1, [RH, Score=205, Expect=2e-66]} {Mouse: ENSMUSG00000025630, Hprt, hypoxanthine guanine phosphoribosyl transferase, [RH, Score=205, Expect=1e-66]} {Celegans: WBGene00013690, hprt-1, Hypoxanthine PhosphoRibosylTransferase homolog, [RH, Score=162, Expect=3e-50]} {Smed: dd_Smed_v6_7763_0_1, dd_Smed_v6_7763_0_1, [RH, Score=213, Expect=7e-70]} {RNA1509_31255, RNA1509_38060, RNA1509_5977} {RNA1310_21781.2, RNA1509_31255, RNA1509_38060, RNA1509_5977} {RNA1509_31255, RNA1509_38060, RNA1509_5977, RNA815_3091.1}

Cumulative graph for MligTC455_33961

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.002 5.604 0.24913 0.89509
RegionR2 -0.047 5.604 0.92317 1.00000
RegionR3 0.223 5.604 0.56878 1.00000
RegionR4 0.452 5.604 0.30385 0.61712
RegionR5 0.911 5.604 0.01107 0.06216
RegionR6 0.23 5.604 0.56077 1.00000
RegionR7 -0.319 5.604 0.49917 1.00000
RegionR8 -0.449 5.604 0.40971 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.089 5.604 0.93595 1.00000
RegenerationR2 0.026 5.604 0.95613 1.00000
RegenerationR3 0.284 5.604 0.56635 0.89218
RegenerationR4 0.24 5.604 0.62843 0.92261
RegenerationR5 0.107 5.604 0.82332 0.99527
RegenerationR6 0.627 5.604 0.19670 0.53655
RegenerationBL 0.619 5.604 0.17598 0.50315
RegenerationTP 0.879 5.604 0.08849 0.46887


Genes with expression patterns similar to MligTC455_33961

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33961 2014 41.95 Mlig455_059516

Neo: -

Age: -

HPRT1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_059516 {REF} {Length: 1578} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=90.0]; Uracil phosphoribosyltransferase [PF14681.8, score=21.1]} {Human: ENSG00000165704, HPRT1, hypoxanthine phosphoribosyltransferase 1, [RH, Score=210, Expect=3e-68]; ENSG00000099256, PRTFDC1, phosphoribosyl transferase domain containing 1, [RH, Score=205, Expect=2e-66]} {Mouse: ENSMUSG00000025630, Hprt, hypoxanthine guanine phosphoribosyl transferase, [RH, Score=205, Expect=1e-66]} {Celegans: WBGene00013690, hprt-1, Hypoxanthine PhosphoRibosylTransferase homolog, [RH, Score=162, Expect=3e-50]} {Smed: dd_Smed_v6_7763_0_1, dd_Smed_v6_7763_0_1, [RH, Score=213, Expect=7e-70]} {RNA1509_31255, RNA1509_38060, RNA1509_5977} {RNA1310_21781.2, RNA1509_31255, RNA1509_38060, RNA1509_5977} {RNA1509_31255, RNA1509_38060, RNA1509_5977, RNA815_3091.1}
2. MligTC455_40597 1608 33.49 Mlig455_029957

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.447/0.00222

1.738 - - - 0.953 - 0.785 Mlig455_029957 {REF} {Length: 1363} {TRANSSPLICED} {RNA1509_10765} {RNA1310_31974, RNA1509_10765} {RNA1509_10765, RNA815_29280}
3. MligTC455_43763 1548 32.26 Mlig455_009134

Neo: -

Age: -

ETFDH 0.962 - - - - - 0.962 Mlig455_009134 {REF} {Length: 3198} {TRANSSPLICED} {Pfam: Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S [PF05187.15, score=158.2]; FAD dependent oxidoreductase [PF01266.26, score=34.3]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=32.5]; FAD binding domain [PF00890.26, score=32.1]; Thi4 family [PF01946.19, score=31.3]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=27.3]; FAD-NAD(P)-binding [PF13454.8, score=23.5]; FAD binding domain [PF01494.21, score=19.2]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=18.7]; HI0933-like protein [PF03486.16, score=18.2]} {Human: ENSG00000171503, ETFDH, electron transfer flavoprotein dehydrogenase, [RH, Score=814, Expect=0.0]} {Mouse: ENSMUSG00000027809, Etfdh, electron transferring flavoprotein, dehydrogenase, [RH, Score=829, Expect=0.0]} {Dmel: FBgn0033465, Etf-QO, Electron transfer flavoprotein-ubiquinone oxidoreductase, [RH, Score=753, Expect=0.0]} {Celegans: WBGene00002855, let-721, Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial, [RH, Score=745, Expect=0.0]} {Smed: dd_Smed_v6_3785_0_1, dd_Smed_v6_3785_0_1, [RH, Score=872, Expect=0.0]} {RNA1509_2025, RNA1509_6739} {RNA1310_8787, RNA1509_2025, RNA1509_6739} {RNA1509_2025, RNA1509_6739, RNA815_3614}
4. Mlig999010.1 0.955 - - - 0.955 - -

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA