Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_33990 | 2322 | 48.37 | Mlig455_064209 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.220 |
Mlig455_064209 {REF} {Length: 1406} {RNA1509_1403, RNA1509_9077} {RNA1310_4629.1, RNA1509_9077} {RNA1509_9077, RNA815_269.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.983 | 5.823 | 0.12121 | 0.71501 | |
RegionR2 | -0.159 | 5.823 | 0.64503 | 0.98183 | |
RegionR3 | 0.722 | 5.823 | 0.00724 | 0.12279 | |
RegionR4 | 0.169 | 5.823 | 0.58543 | 0.90112 | |
RegionR5 | 0.771 | 5.823 | 0.00188 | 0.01665 | |
RegionR6 | 0.047 | 5.823 | 0.86885 | 1.00000 | |
RegionR7 | -0.039 | 5.823 | 0.89917 | 1.00000 | |
RegionR8 | -0.529 | 5.823 | 0.15783 | 0.71911 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -2.149 | 5.823 | 0.10368 | 0.82371 | |
RegenerationR2 | -0.221 | 5.823 | 0.50442 | 0.87294 | |
RegenerationR3 | -0.454 | 5.823 | 0.17967 | 0.61549 | |
RegenerationR4 | 0.156 | 5.823 | 0.65245 | 0.93445 | |
RegenerationR5 | -0.102 | 5.823 | 0.75288 | 0.97249 | |
RegenerationR6 | 0.383 | 5.823 | 0.26156 | 0.61165 | |
RegenerationBL | -0.106 | 5.823 | 0.77125 | 1.00000 | |
RegenerationTP | -0.802 | 5.823 | 0.06113 | 0.40028 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_33990 | 2322 | 48.37 | Mlig455_064209 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.220 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_064209 {REF} {Length: 1406} {RNA1509_1403, RNA1509_9077} {RNA1310_4629.1, RNA1509_9077} {RNA1509_9077, RNA815_269.1} | |
2. | MligTC455_13253 | 727 | 15.15 | Mlig455_000519 | Neo: - Age: - Region-enriched R5: 1.363/0.00499 |
PRMT5 | 2.575 | 0.824 | - | - | 0.955 | 0.796 | - | Mlig455_000519 {REF} {Length: 2673} {TRANSSPLICED} {Pfam: PRMT5 arginine-N-methyltransferase [PF05185.18, score=193.6]; PRMT5 TIM barrel domain [PF17285.4, score=193.0]; PRMT5 oligomerisation domain [PF17286.4, score=155.4]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [RH, Score=526, Expect=3e-179]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [RH, Score=519, Expect=2e-176]} {Dmel: FBgn0015925, csul, capsuleen, [RH, Score=358, Expect=8e-115]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [RH, Score=287, Expect=2e-86]} {Smed: dd_Smed_v6_8688_0_1, dd_Smed_v6_8688_0_1, [RH, Score=466, Expect=5e-156]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} |
3. | MligTC455_23619 | 292 | 6.09 | Mlig455_015174 | Neo: - Age: - |
NUBP1 | 2.428 | 0.745 | - | - | 0.957 | - | 0.726 | Mlig455_015174 {REF} {Length: 6201} {TRANSSPLICED} {Pfam: NUBPL iron-transfer P-loop NTPase [PF10609.11, score=294.3]; mbt repeat [PF02820.20, score=108.4]; SLED domain [PF12140.10, score=86.1]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.25, score=27.7]; AAA domain [PF13614.8, score=21.0]; AAA domain [PF13500.8, score=18.7]} {Human: ENSG00000103274, NUBP1, nucleotide binding protein 1, [RH, Score=378, Expect=2e-121]} {Mouse: ENSMUSG00000022503, Nubp1, nucleotide binding protein 1, [RH, Score=383, Expect=2e-123]} {Dmel: FBgn0032597, CG17904, [RH, Score=315, Expect=3e-98]} {Celegans: WBGene00008664, nubp-1, Cytosolic Fe-S cluster assembly factor NUBP1 homolog, [RH, Score=365, Expect=6e-117]} {Smed: dd_Smed_v6_3014_0_1, dd_Smed_v6_3014_0_1, [RH, Score=330, Expect=1e-103]} {RNA1509_11523} {RNA1310_4982.2} {RNA815_1974} |
4. | MligTC455_48222 | 885 | 18.44 | Mlig455_031424, Mlig455_056469 | Neo: - Age: Down-Up-Up |
GFER | 2.419 | - | - | - | 0.721 | 0.965 | 0.733 | Mlig455_031424 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.4]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=147, Expect=2e-44]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=134, Expect=6e-39]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=1e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=160, Expect=8e-51]} {RNA1509_41230} {RNA1310_32417.1} {RNA815_24929} Mlig455_056469 {REF} {Length: 1066} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.3]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=149, Expect=5e-45]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=132, Expect=5e-38]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=2e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=161, Expect=6e-51]} {RNA1509_19287, RNA1509_41230} {RNA1310_32417.1, RNA1509_19287, RNA1509_41230} {RNA1509_19287, RNA1509_41230, RNA815_24929} |
5. | MligTC455_13252 | 756 | 15.76 | Mlig455_000483 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.414/0.00198 |
PRMT5 | 2.389 | 0.716 | - | - | 0.961 | 0.712 | - | Mlig455_000483 {REF} {Length: 2673} {TRANSSPLICED} {Pfam: PRMT5 TIM barrel domain [PF17285.4, score=194.3]; PRMT5 arginine-N-methyltransferase [PF05185.18, score=193.0]; PRMT5 oligomerisation domain [PF17286.4, score=155.4]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [RH, Score=528, Expect=3e-180]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [RH, Score=521, Expect=2e-177]} {Dmel: FBgn0015925, csul, capsuleen, [RH, Score=356, Expect=8e-114]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [RH, Score=286, Expect=4e-86]} {Smed: dd_Smed_v6_8688_0_1, dd_Smed_v6_8688_0_1, [RH, Score=466, Expect=6e-156]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} |
6. | MligTC455_45133 | 1102 | 22.97 | Mlig455_029424 | Neo: - Age: Up-Down-Down |
LAMC1 | 1.83 | - | - | - | 0.968 | 0.862 | - | Mlig455_029424 {REF} {Length: 4934} {Pfam: Laminin EGF domain [PF00053.26, score=234.3]; Laminin B (Domain IV) [PF00052.20, score=43.2]} {Human: ENSG00000135862, LAMC1, laminin subunit gamma 1, [Score=687, Expect=0.0]; ENSG00000050555, LAMC3, laminin subunit gamma 3, [Score=654, Expect=0.0]} {Mouse: ENSMUSG00000026478, Lamc1, laminin, gamma 1, [Score=681, Expect=0.0]; ENSMUSG00000026840, Lamc3, laminin gamma 3, [Score=647, Expect=0.0]} {Dmel: FBgn0267348, LanB2, Laminin B2, [Score=704, Expect=0.0]} {Celegans: WBGene00016913, lam-2, Laminin-like protein lam-2, [Score=644, Expect=0.0]} {Smed: dd_Smed_v6_7359_0_1, dd_Smed_v6_7359_0_1, [Score=608, Expect=0.0]} {RNA1509_19604} {RNA1310_816} {RNA815_1605} |
7. | MligTC455_25872 | 968 | 20.16 | Mlig455_038016 | Neo: - Age: - |
DNPEP | 1.804 | - | - | - | 0.960 | 0.844 | - | Mlig455_038016 {REF} {Length: 2244} {TRANSSPLICED} {Pfam: Aminopeptidase I zinc metalloprotease (M18) [PF02127.17, score=490.1]} {Human: ENSG00000123992, DNPEP, aspartyl aminopeptidase, [RH, Score=457, Expect=5e-158]} {Mouse: ENSMUSG00000026209, Dnpep, aspartyl aminopeptidase, [RH, Score=451, Expect=2e-155]} {Celegans: WBGene00017163, dnpp-1, Aspartyl aminopeptidase, [RH, Score=392, Expect=9e-133]} {Smed: dd_Smed_v6_1052_0_1, dd_Smed_v6_1052_0_1, [RH, Score=490, Expect=2e-171]} {RNA1509_11426, RNA1509_40903, RNA1509_42461, RNA1509_53424} {RNA1310_3251.1, RNA1509_40903, RNA1509_42461, RNA1509_53424} {RNA1509_40903, RNA1509_42461, RNA1509_53424, RNA815_952.1} |
8. | MligTC455_53614 | 1517 | 31.61 | Mlig455_024547 | Neo: - Age: - Region-enriched R4: 1.088/0.00445 |
SLC25A42 | 1.799 | - | - | - | 0.958 | - | 0.841 | Mlig455_024547 {REF} {Length: 3477} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=229.7]} {Human: ENSG00000181035, SLC25A42, solute carrier family 25 member 42, [RH, Score=286, Expect=8e-95]} {Mouse: ENSMUSG00000002346, Slc25a42, solute carrier family 25, member 42, [RH, Score=287, Expect=1e-95]} {Dmel: FBgn0067783, DPCoAC, Dephosphocoenzyme A carrier, [RH, Score=284, Expect=8e-94]} {Celegans: WBGene00009666, slc-25A42, SLC (SoLute Carrier) homolog, [RH, Score=270, Expect=1e-89]} {Smed: dd_Smed_v6_11616_0_1, dd_Smed_v6_11616_0_1, [RH, Score=284, Expect=8e-95]} {RNA1509_13596, RNA1509_35765} {RNA1310_16060, RNA1509_13596, RNA1509_35765} {RNA1509_13596, RNA1509_35765, RNA815_8391} |
9. | MligTC455_15629 | 415 | 8.65 | Mlig455_004619 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.273/0.00412 Regeneration-upregulated R3: 2.136 Regeneration-enriched R3: 2.136 |
MCM2 | 1.754 | - | - | - | 0.965 | 0.789 | - | Mlig455_004619 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=330.2]; MCM OB domain [PF17207.5, score=130.7]; MCM AAA-lid domain [PF17855.3, score=109.4]; Mini-chromosome maintenance protein 2 [PF12619.10, score=55.8]; MCM N-terminal domain [PF14551.8, score=50.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]} {Human: ENSG00000073111, MCM2, minichromosome maintenance complex component 2, [RH, Score=1056, Expect=0.0]} {Mouse: ENSMUSG00000002870, Mcm2, minichromosome maintenance complex component 2, [RH, Score=1046, Expect=0.0]} {Dmel: FBgn0014861, Mcm2, Minichromosome maintenance 2, [RH, Score=991, Expect=0.0]} {Celegans: WBGene00003154, mcm-2, Yeast MCM (Licensing factor) related, [RH, Score=895, Expect=0.0]} {Smed: dd_Smed_v6_7682_0_1, dd_Smed_v6_7682_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_3101} {RNA1310_746.2} {RNA815_2497} |
10. | MligTC455_52895 | 2080 | 43.34 | Mlig455_011175 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.107/0.01204 |
1.744 | - | - | - | 0.781 | - | 0.963 | Mlig455_011175 {REF} {Length: 5884} {Pfam: Nucleoporin FG repeat region [PF13634.8, score=101.6]} {Mouse: ENSMUSG00000001855, Nup214, nucleoporin 214, [Score=52.0, Expect=5e-06]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [Score=54.7, Expect=4e-07]} {RNA1509_11924, RNA1509_19727, RNA1509_20579, RNA1509_25429, RNA1509_36479, RNA1509_42641, RNA1509_45545, RNA1509_47026, RNA1509_51564} {RNA1310_12555, RNA1509_11924, RNA1509_19727, RNA1509_20579, RNA1509_25429, RNA1509_36479, RNA1509_42641, RNA1509_45545, RNA1509_47026, RNA1509_51564} {RNA1509_11924, RNA1509_19727, RNA1509_20579, RNA1509_25429, RNA1509_36479, RNA1509_42641, RNA1509_45545, RNA1509_47026, RNA1509_51564, RNA815_2622} | |
11. | MligTC455_47389 | 1959 | 40.8 | Mlig455_012972 | Neo: - Age: - |
SEC13 | 1.726 | - | - | - | - | 0.768 | 0.958 | Mlig455_012972 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=74.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=30.7]} {Human: ENSG00000157020, SEC13, SEC13 homolog, nuclear pore and COPII coat complex component, [RH, Score=386, Expect=2e-134]} {Mouse: ENSMUSG00000030298, Sec13, SEC13 homolog, nuclear pore and COPII coat complex component, [RH, Score=385, Expect=2e-134]} {Dmel: FBgn0024509, Sec13, Secretory 13, [RH, Score=332, Expect=4e-113]} {Celegans: WBGene00003806, npp-20, Protein SEC13 homolog, [RH, Score=246, Expect=5e-80]} {Smed: dd_Smed_v6_836_0_1, dd_Smed_v6_836_0_1, [RH, Score=315, Expect=4e-107]} {RNA1509_10731, RNA1509_19689, RNA1509_32561, RNA1509_40360, RNA1509_49501, RNA1509_52881, RNA1509_6799} {RNA1310_20303, RNA1509_10731, RNA1509_19689, RNA1509_32561, RNA1509_40360, RNA1509_49501, RNA1509_52881, RNA1509_6799} {RNA1509_10731, RNA1509_19689, RNA1509_32561, RNA1509_40360, RNA1509_49501, RNA1509_52881, RNA1509_6799, RNA815_8231} |
12. | MligTC455_39016 | 998 | 20.79 | Mlig455_033396 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.243/0.00353 |
TCEA2 | 1.688 | - | - | 0.738 | - | - | 0.950 | Mlig455_033396 {REF} {Length: 1574} {Pfam: Transcription factor S-II (TFIIS), central domain [PF07500.16, score=114.4]; Transcription factor S-II (TFIIS) [PF01096.20, score=70.2]; TFIIS helical bundle-like domain [PF08711.13, score=33.7]} {Human: ENSG00000171703, TCEA2, transcription elongation factor A2, [RH, Score=258, Expect=1e-84]; ENSG00000187735, TCEA1, transcription elongation factor A1, [RH, Score=252, Expect=2e-82]} {Mouse: ENSMUSG00000033813, Tcea1, transcription elongation factor A (SII) 1, [RH, Score=247, Expect=2e-80]; ENSMUSG00000059540, Tcea2, transcription elongation factor A (SII), 2, [RH, Score=246, Expect=5e-80]; ENSMUSG00000001604, Tcea3, transcription elongation factor A (SII), 3, [RH, Score=240, Expect=3e-77]} {Dmel: FBgn0010422, TfIIS, RNA polymerase II elongation factor, [RH, Score=245, Expect=8e-80]} {Celegans: WBGene00012000, T24H10.1, Putative transcription elongation factor S-II, [RH, Score=212, Expect=6e-67]} {Smed: dd_Smed_v6_3176_0_1, dd_Smed_v6_3176_0_1, [RH, Score=253, Expect=4e-83]} {RNA1509_7459} {RNA1310_7696, RNA1509_7459} {RNA1509_7459, RNA815_8604} |
13. | MligTC455_53953 | 1355 | 28.23 | Mlig455_034731 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.235 Region-enriched R4: 1.589/0.02363 |
GLUD1 | 1.677 | 0.721 | - | - | 0.956 | - | - | Mlig455_034731 {REF} {Length: 2660} {Pfam: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain [PF02812.20, score=194.2]; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase [PF00208.23, score=169.3]} {Human: ENSG00000148672, GLUD1, glutamate dehydrogenase 1, [RH, Score=777, Expect=0.0]; ENSG00000182890, GLUD2, glutamate dehydrogenase 2, [RH, Score=765, Expect=0.0]} {Mouse: ENSMUSG00000021794, Glud1, glutamate dehydrogenase 1, [RH, Score=781, Expect=0.0]} {Dmel: FBgn0001098, Gdh, Glutamate dehydrogenase, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00014095, gdh-1, Glutamate dehydrogenase, [RH, Score=640, Expect=0.0]} {Smed: dd_Smed_v6_932_0_1, dd_Smed_v6_932_0_1, [RH, Score=715, Expect=0.0]} {RNA1509_10612, RNA1509_40304} {RNA1310_5462.1, RNA1509_10612, RNA1509_40304} {RNA1509_10612, RNA1509_40304, RNA815_2103.2} |
14. | MligTC455_36832 | 6263 | 130.48 | Mlig455_051664 | Neo: - Age: - |
0.97 | - | - | - | - | - | 0.970 | Mlig455_051664 {REF} {Length: 686} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35203, RNA1509_3775} {RNA1310_48900, RNA1509_35203, RNA1509_3775} {RNA1509_35203, RNA1509_3775, RNA815_26209} | |
15. | MligTC455_25594 | 546 | 11.38 | Mlig455_010729 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_010729 {REF} {Length: 6514} {TRANSSPLICED} {RNA1509_4078} {RNA1310_3072, RNA1509_4078} {RNA1509_4078, RNA815_5186} | |
16. | MligTC455_49069 | 3685 | 76.77 | Mlig455_070251 | Neo: - Age: logFC(26M/2M)=0.212 Region-enriched R4: 1.746/0.00071 |
CS | 0.963 | - | - | - | 0.963 | - | - | Mlig455_070251 {REF} {Length: 2221} {TRANSSPLICED} {Pfam: Citrate synthase, C-terminal domain [PF00285.23, score=347.7]} {Human: ENSG00000062485, CS, citrate synthase, [RH, Score=701, Expect=0.0]} {Mouse: ENSMUSG00000005683, Cs, citrate synthase, [RH, Score=699, Expect=0.0]; ENSMUSG00000046934, Csl, citrate synthase like, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0261955, kdn, knockdown, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00000833, cts-1, Probable citrate synthase, mitochondrial, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_335_0_1, dd_Smed_v6_335_0_1, [RH, Score=706, Expect=0.0]} {RNA1509_762} {RNA1310_11494.1} {RNA815_3764.1} |
17. | MligTC455_24174 | 2310 | 48.14 | Mlig455_000738 | Neo: - Age: logFC(26M/2M)=0.412 Region-enriched R4: 1.066/0.04245 |
PC | 0.956 | - | - | - | 0.956 | - | - | Mlig455_000738 {REF} {Length: 5201} {TRANSSPLICED} {Pfam: Carbamoyl-phosphate synthase L chain, ATP binding domain [PF02786.19, score=260.1]; Conserved carboxylase domain [PF02436.20, score=226.0]; Biotin carboxylase, N-terminal domain [PF00289.24, score=143.2]; Biotin carboxylase C-terminal domain [PF02785.21, score=108.1]; HMGL-like [PF00682.21, score=88.9]; Biotin-requiring enzyme [PF00364.24, score=57.4]; D-ala D-ala ligase C-terminus [PF07478.15, score=30.6]; Biotin-lipoyl like [PF13533.8, score=26.0]; ATP-grasp domain [PF02222.24, score=23.4]; Na(+)-translocating NADH-quinone reductase subunit A (NQRA) [PF05896.13, score=22.4]; HlyD family secretion protein [PF13437.8, score=19.7]} {Human: ENSG00000173599, PC, pyruvate carboxylase, [RH, Score=1478, Expect=0.0]} {Mouse: ENSMUSG00000024892, Pcx, pyruvate carboxylase, [RH, Score=1469, Expect=0.0]} {Dmel: FBgn0027580, PCB, Pyruvate carboxylase, [RH, Score=1523, Expect=0.0]} {Celegans: WBGene00004258, pyc-1, Pyruvate carboxylase 1, [RH, Score=1472, Expect=0.0]} {Smed: dd_Smed_v6_2393_0_1, dd_Smed_v6_2393_0_1, [RH, Score=1543, Expect=0.0]} {RNA1509_10197, RNA1509_29223, RNA1509_39676, RNA1509_886} {RNA1310_1189, RNA1509_10197, RNA1509_29223, RNA1509_39676} {RNA1509_10197, RNA1509_29223, RNA1509_39676, RNA815_728} |
18. | MligTC455_32459 | 510 | 10.62 | Mlig455_012973 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_012973 {REF} {Length: 2586} {RNA1310_38015.1} {RNA815_33513} |