TomoSeq data search

Data search

Results for MligTC455_34020

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34020

139

2.91

Mlig455_039854, Mlig455_039889

Neo: -

Age: -

GPT2

Mlig455_039854 {REF} {Length: 3369} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=50.1]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [Score=172, Expect=2e-45]; ENSG00000167701, GPT, glutamic--pyruvic transaminase, [Score=168, Expect=3e-44]} {Mouse: ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [Score=177, Expect=3e-47]} {Dmel: FBgn0030478, CG1640, [Score=174, Expect=5e-46]} {Celegans: WBGene00016333, C32F10.8, [Score=181, Expect=7e-49]} {Smed: dd_Smed_v6_3215_0_2, dd_Smed_v6_3215_0_2, [Score=177, Expect=6e-48]} {RNA1509_47910} {RNA1310_26267.1} {RNA815_11969}

Mlig455_039889 {REF} {Length: 1071} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=23.1]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [Score=50.8, Expect=1e-07]} {Mouse: ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [Score=55.1, Expect=4e-09]} {Dmel: FBgn0030478, CG1640, [Score=60.1, Expect=4e-11]} {Celegans: WBGene00016333, C32F10.8, [Score=60.5, Expect=2e-11]} {Smed: dd_Smed_v6_2988_0_1, dd_Smed_v6_2988_0_1, [Score=71.2, Expect=3e-15]} {RNA1509_47910} {RNA1310_16715} {RNA815_11969}

Cumulative graph for MligTC455_34020

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.9	2.355	0.22266	0.86615
RegionR2	-0.906	2.355	0.33448	0.72604
RegionR3	0.159	2.355	0.78402	1.00000
RegionR4	-0.006	2.355	0.98851	1.00000
RegionR5	-0.178	2.355	0.71657	1.00000
RegionR6	0.057	2.355	0.92697	1.00000
RegionR7	-0.377	2.355	0.73291	1.00000
RegionR8	-0.65	2.355	0.64615	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.36	2.355	0.32164	1.00000
RegenerationR2	0.499	2.355	0.59439	0.91311
RegenerationR3	-0.068	2.355	0.94168	1.00000
RegenerationR4	0.653	2.355	0.38132	0.80208
RegenerationR5	0.854	2.355	0.14090	0.55371
RegenerationR6	0.592	2.355	0.41254	0.74574
RegenerationBL	0.407	2.355	0.74948	1.00000
RegenerationTP	0.802	2.355	0.51054	0.90759

Genes with expression patterns similar to MligTC455_34020

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34020	139	2.91	Mlig455_039854, Mlig455_039889	Neo: - Age: -	GPT2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039854 {REF} {Length: 3369} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=50.1]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [Score=172, Expect=2e-45]; ENSG00000167701, GPT, glutamic--pyruvic transaminase, [Score=168, Expect=3e-44]} {Mouse: ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [Score=177, Expect=3e-47]} {Dmel: FBgn0030478, CG1640, [Score=174, Expect=5e-46]} {Celegans: WBGene00016333, C32F10.8, [Score=181, Expect=7e-49]} {Smed: dd_Smed_v6_3215_0_2, dd_Smed_v6_3215_0_2, [Score=177, Expect=6e-48]} {RNA1509_47910} {RNA1310_26267.1} {RNA815_11969} Mlig455_039889 {REF} {Length: 1071} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=23.1]} {Human: ENSG00000166123, GPT2, glutamic--pyruvic transaminase 2, [Score=50.8, Expect=1e-07]} {Mouse: ENSMUSG00000031700, Gpt2, glutamic pyruvate transaminase (alanine aminotransferase) 2, [Score=55.1, Expect=4e-09]} {Dmel: FBgn0030478, CG1640, [Score=60.1, Expect=4e-11]} {Celegans: WBGene00016333, C32F10.8, [Score=60.5, Expect=2e-11]} {Smed: dd_Smed_v6_2988_0_1, dd_Smed_v6_2988_0_1, [Score=71.2, Expect=3e-15]} {RNA1509_47910} {RNA1310_16715} {RNA815_11969}
2.	MligTC455_40045	808	16.84	Mlig455_004522, Mlig455_064186	Neo: Int S/G2/M Age: -		1.833	-	-	-	-	0.953	0.880	Mlig455_004522 {REF} {Length: 554} {TRANSSPLICED} {RNA1509_32197, RNA1509_38867} {RNA1310_64544, RNA1509_32197} {RNA1509_32197, RNA815_56948} Mlig455_064186 {REF} {Length: 627} {RNA1509_25301} {RNA1310_64544} {RNA815_56948}
3.	MligTC455_07563	21	0.43	Mlig455_045090	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_045090 {REF} {Length: 953} {NoTransDecoderORF}
4.	MligTC455_48742	54	1.12	Mlig455_069050	Neo: - Age: -	CAMK1G	0.964	-	-	-	0.964	-	-	Mlig455_069050 {REF} {Length: 3460} {Pfam: Protein kinase domain [PF00069.27, score=100.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=74.6]; Phosphotransferase enzyme family [PF01636.25, score=18.5]; Fungal protein kinase [PF17667.3, score=18.4]} {Human: ENSG00000008118, CAMK1G, calcium/calmodulin dependent protein kinase IG, [Score=75.5, Expect=2e-13]; ENSG00000130822, PNCK, pregnancy up-regulated nonubiquitous CaM kinase, [Score=73.2, Expect=5e-13]; ENSG00000185974, GRK1, G protein-coupled receptor kinase 1, [Score=72.8, Expect=2e-12]; ENSG00000213341, CHUK, conserved helix-loop-helix ubiquitous kinase, [Score=72.8, Expect=2e-12]} {Mouse: ENSMUSG00000016179, Camk1g, calcium/calmodulin-dependent protein kinase I gamma, [Score=75.9, Expect=4e-14]; ENSMUSG00000031450, Grk1, G protein-coupled receptor kinase 1, [Score=74.7, Expect=3e-13]; ENSMUSG00000073458, Smok2a, sperm motility kinase 2A, [Score=74.3, Expect=3e-13]; ENSMUSG00000025199, Chuk, conserved helix-loop-helix ubiquitous kinase, [Score=73.2, Expect=1e-12]; ENSMUSG00000030866, Ern2, endoplasmic reticulum (ER) to nucleus signalling 2, [Score=72.4, Expect=2e-12]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=72.0, Expect=7e-13]} {Celegans: WBGene00020106, R151.1, [Score=72.0, Expect=1e-12]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=80.1, Expect=4e-16]} {RNA1509_12915} {RNA1310_2128} {RNA815_5571}
5.	MligTC455_51391	36	0.75	Mlig455_010711	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_010711 {REF} {Length: 2180} {NoTransDecoderORF} {RNA1509_40957} {RNA1310_20727.1} {RNA815_16253.1}
6.	MligTC455_40044	1177	24.51	Mlig455_001043, Mlig455_064246	Neo: Neoblast Age: Down-Up-Up Region-enriched R5: 1.277/0.00078		0.955	-	-	-	-	0.955	-	Mlig455_001043 {REF} {Length: 555} {RNA1509_25301} {RNA1310_64544} {RNA815_56948} Mlig455_064246 {REF} {Length: 561} {TRANSSPLICED} {RNA1509_25301} {RNA1310_64544} {RNA815_56948}
7.	MligTC455_33787	57	1.19	Mlig455_029357	Neo: - Age: -	ZNF383	0.951	-	-	-	0.951	-	-	Mlig455_029357 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=196.4]; Zinc finger, C2H2 type [PF00096.28, score=140.8]; C2H2-type zinc finger [PF13894.8, score=117.0]; C2H2-type zinc finger [PF13912.8, score=63.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=63.0]; Zinc-finger of C2H2 type [PF12874.9, score=42.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=31.4]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=30.0]; Family of unknown function (DUF5830) [PF19148.2, score=29.8]; BED zinc finger [PF02892.17, score=28.2]; Zinc ribbon domain [PF09723.12, score=27.0]; Family of unknown function (DUF5810) [PF19126.2, score=26.3]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.6]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=23.1]; zinc-finger C2H2-type [PF16622.7, score=22.4]; BolA-like protein [PF01722.20, score=22.0]; KIAA1045 RING finger [PF16744.7, score=22.0]; C1 domain [PF03107.18, score=19.9]; Sec23/Sec24 zinc finger [PF04810.17, score=18.6]} {Human: ENSG00000188283, ZNF383, zinc finger protein 383, [Score=266, Expect=3e-85]; ENSG00000198315, ZKSCAN8, zinc finger with KRAB and SCAN domains 8, [Score=265, Expect=2e-83]; ENSG00000167384, ZNF180, zinc finger protein 180, [Score=258, Expect=5e-80]; ENSG00000167232, ZNF91, zinc finger protein 91, [Score=258, Expect=4e-77]; ENSG00000131849, ZNF132, zinc finger protein 132, [Score=255, Expect=2e-78]; ENSG00000198039, ZNF273, zinc finger protein 273, [Score=254, Expect=1e-79]; ENSG00000171827, ZNF570, zinc finger protein 570, [Score=254, Expect=7e-80]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=254, Expect=9e-78]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=253, Expect=2e-77]; ENSG00000274349, ZNF658, zinc finger protein 658, [Score=253, Expect=2e-75]; ENSG00000197050, ZNF420, zinc finger protein 420, [Score=253, Expect=1e-77]; ENSG00000198939, ZFP2, ZFP2 zinc finger protein, [Score=253, Expect=5e-80]} {Mouse: ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=264, Expect=4e-84]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=260, Expect=1e-80]; ENSMUSG00000095648, Gm2004, predicted gene 2004, [Score=258, Expect=6e-81]; ENSMUSG00000078875, Gm14419, predicted gene 14419, [Score=258, Expect=6e-81]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=254, Expect=3e-77]; ENSMUSG00000063894, Zkscan8, zinc finger with KRAB and SCAN domains 8, [Score=254, Expect=6e-80]; ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=253, Expect=1e-80]; ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=252, Expect=2e-77]; ENSMUSG00000074519, Zfp971, zinc finger protein 971, [Score=251, Expect=3e-79]; ENSMUSG00000049321, Zfp2, zinc finger protein 2, [Score=251, Expect=1e-79]; ENSMUSG00000067942, Zfp160, zinc finger protein 160, [Score=251, Expect=8e-78]; ENSMUSG00000078906, Gm14444, predicted gene 14444, [Score=251, Expect=5e-80]; ENSMUSG00000057101, Zfp180, zinc finger protein 180, [Score=251, Expect=1e-77]; ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=251, Expect=8e-77]; ENSMUSG00000078865, Gm14406, predicted gene 14406, [Score=251, Expect=5e-80]} {Dmel: FBgn0032295, CG12299, [Score=192, Expect=3e-55]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=145, Expect=8e-42]} {Smed: dd_Smed_v6_10676_0_1, dd_Smed_v6_10676_0_1, [Score=156, Expect=1e-44]} {RNA1509_40774, RNA1509_7336} {RNA1310_42873, RNA1509_40774} {RNA1509_40774, RNA815_11426.2}
8.	MligTC455_22257	24	0.49	Mlig455_002961	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_002961 {REF} {Length: 1429} {NoTransDecoderORF} {RNA1509_19236} {RNA1310_28041.2} {RNA815_50832.1}

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