TomoSeq data search

Data search

Results for MligTC455_34102

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34102

31

0.64

Mlig455_057621

Neo: -

Age: Up-Down-Down

Mlig455_057621 {REF} {Length: 8165} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.8]; Integrase zinc binding domain [PF17921.3, score=67.4]; Integrase core domain [PF00665.28, score=45.0]; H2C2 zinc finger [PF09337.12, score=28.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.8]; Aspartyl protease [PF13650.8, score=21.8]; Retroviral aspartyl protease [PF00077.22, score=19.6]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=381, Expect=2e-118]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}

Cumulative graph for MligTC455_34102

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.014	1.038	0.77987	1.00000
RegionR2	1.266	1.038	0.28274	0.66928
RegionR3	-1.882	1.038	0.99963	1.00000
RegionR4	1.394	1.038	0.17056	0.43424
RegionR5	0.019	1.038	0.67649	1.00000
RegionR6	1.371	1.038	0.23131	0.81590
RegionR7	-2.234	1.038	0.99963	1.00000
RegionR8	0.053	1.038	0.76805	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-2.822	1.038	0.70862	1.00000
RegenerationR2	0.487	1.038	0.64570	0.93409
RegenerationR3	2.499	1.038	0.11869	0.53655
RegenerationR4	0.515	1.038	0.67457	0.94408
RegenerationR5	0.866	1.038	0.44981	0.83092
RegenerationR6	0.569	1.038	0.66034	0.90369
RegenerationBL	-2.094	1.038	0.99963	1.00000
RegenerationTP	3.51	1.038	0.10962	0.50976

Genes with expression patterns similar to MligTC455_34102

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34102	31	0.64	Mlig455_057621	Neo: - Age: Up-Down-Down		3	-	-	1.000	-	1.000	1.000	Mlig455_057621 {REF} {Length: 8165} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=111.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.8]; Integrase zinc binding domain [PF17921.3, score=67.4]; Integrase core domain [PF00665.28, score=45.0]; H2C2 zinc finger [PF09337.12, score=28.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.8]; Aspartyl protease [PF13650.8, score=21.8]; Retroviral aspartyl protease [PF00077.22, score=19.6]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=381, Expect=2e-118]} {RNA1509_34066} {RNA1310_1125} {RNA815_16355}
2.	MligTC455_33172	36	0.76	Mlig455_048552, Mlig455_053340	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_048552 {REF} {Length: 1151} {NoTransDecoderORF} {RNA1509_39047} {RNA1310_37860} {RNA815_57966} Mlig455_053340 {REF} {Length: 1990} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_42625} {RNA1310_37926} {RNA815_32504}
3.	MligTC455_48748	197	4.11	Mlig455_031142, Mlig455_031150	Neo: Germline Age: Up-Down-Up		0.966	-	-	-	-	0.966	-	Mlig455_031142 {REF} {Length: 2080} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=43.1]} {RNA1509_12866} {RNA1310_29500} {RNA815_13452} Mlig455_031150 {REF} {Length: 2537} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=43.1]} {RNA1509_12866} {RNA1310_29500} {RNA815_13452}
4.	MligTC455_08712	27	0.57	Mlig455_060852	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_060852 {REF} {Length: 754} {NoTransDecoderORF} {RNA1310_98004}
5.	MligTC455_15110	44	0.91	Mlig455_047180	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.335		0.955	-	-	-	-	0.955	-	Mlig455_047180 {REF} {Length: 3150} {RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1310_6375.1, RNA1509_12062, RNA1509_1568, RNA1509_8241} {RNA1509_12062, RNA1509_1568, RNA1509_8241, RNA815_2043}
6.	MligTC455_28017	212	4.42	Mlig455_022438	Neo: - Age: Up-Down-Down		0.955	-	-	0.955	-	-	-	Mlig455_022438 {REF} {Length: 508} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}
7.	MligTC455_35387	36	0.76	Mlig455_022493	Neo: - Age: -	STOM	0.955	-	-	-	-	0.955	-	Mlig455_022493 {REF} {Length: 3725} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=106.9]} {Human: ENSG00000148175, STOM, stomatin, [Score=318, Expect=2e-105]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=318, Expect=1e-105]} {Dmel: FBgn0260657, CG42540, [Score=333, Expect=4e-110]} {Celegans: WBGene00003166, mec-2, Mechanosensory protein 2, [Score=331, Expect=1e-110]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=392, Expect=4e-135]} {RNA1509_58730} {RNA1310_46627} {RNA815_48856}
8.	MligTC455_16697	35	0.72	Mlig455_024848	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_024848 {REF} {Length: 2496} {NoTransDecoderORF} {RNA1310_114125} {RNA815_53866}
9.	MligTC455_07222	47	0.97	Mlig455_009221	Neo: - Age: - Region-enriched R8: 6.398/0.03941		0.953	-	-	-	-	0.953	-	Mlig455_009221 {REF} {Length: 51} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59307} {RNA1310_29502.3} {RNA815_13716.1}
10.	MligTC455_28018	145	3.01	Mlig455_031793	Neo: - Age: Down-Down-Down		0.95	-	-	0.950	-	-	-	Mlig455_031793 {REF} {Length: 490} {NoTransDecoderORF} {RNA1509_3} {RNA1310_851.1} {RNA815_80.1}

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