TomoSeq data search

Data search

Results for MligTC455_34105

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34105	236	4.91	Mlig455_058228	Neo: - Age: Up-Down-Down Region-enriched R5: 1.911/0.00007	CACNA2D3	Mlig455_058228 {REF} {Length: 5769} {Pfam: Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=40.4]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=60.5, Expect=2e-09]} {Dmel: FBgn0028863, CG4587, [Score=59.3, Expect=4e-09]} {RNA1509_34066} {RNA1310_1125} {RNA815_308}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_34105

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.226	2.832	0.90146	1.00000
RegionR2	0.922	2.832	0.22202	0.59149
RegionR3	-1.012	2.832	0.10599	0.56928
RegionR4	-2.413	2.832	0.00756	0.04947
RegionR5	1.911	2.832	0.00000	0.00007
RegionR6	-0.108	2.832	0.86270	1.00000
RegionR7	-0.181	2.832	0.82857	1.00000
RegionR8	0.656	2.832	0.42772	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.48	2.832	0.45725	1.00000
RegenerationR2	0.077	2.832	0.87150	1.00000
RegenerationR3	0.548	2.832	0.46068	0.83800
RegenerationR4	0.705	2.832	0.45279	0.84347
RegenerationR5	-0.275	2.832	0.61476	0.91655
RegenerationR6	-0.449	2.832	0.55390	0.84151
RegenerationBL	0.386	2.832	0.65671	0.99209
RegenerationTP	-0.355	2.832	0.69653	1.00000

Genes with expression patterns similar to MligTC455_34105

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34105	236	4.91	Mlig455_058228	Neo: - Age: Up-Down-Down Region-enriched R5: 1.911/0.00007	CACNA2D3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058228 {REF} {Length: 5769} {Pfam: Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=40.4]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=60.5, Expect=2e-09]} {Dmel: FBgn0028863, CG4587, [Score=59.3, Expect=4e-09]} {RNA1509_34066} {RNA1310_1125} {RNA815_308}
2.	MligTC455_34106	703	14.65	Mlig455_044525, Mlig455_062524, Mlig455_068573	Neo: Irradiation Age: - Region-enriched R5: 1.717/0.00109	CACNA2D3	5.925	0.999	0.999	0.997	0.966	0.969	0.995	Mlig455_044525 {REF} {Length: 5598} {Pfam: VWA N-terminal [PF08399.13, score=86.8]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=52.2]; von Willebrand factor type A domain [PF13768.8, score=28.1]; von Willebrand factor type A domain [PF13519.8, score=25.8]; von Willebrand factor type A domain [PF00092.30, score=25.6]; Cache domain [PF02743.20, score=18.5]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=246, Expect=4e-66]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=245, Expect=5e-66]} {Dmel: FBgn0261041, stj, straightjacket, [Score=335, Expect=5e-95]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=192, Expect=3e-49]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [RH, Score=439, Expect=2e-132]} {RNA1509_24478} {RNA1310_1519} {RNA815_308} Mlig455_062524 {REF} {Length: 4806} {Pfam: VWA N-terminal [PF08399.13, score=88.0]; von Willebrand factor type A domain [PF13768.8, score=29.6]; von Willebrand factor type A domain [PF13519.8, score=27.1]; von Willebrand factor type A domain [PF00092.30, score=27.0]; Cache domain [PF02743.20, score=19.6]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=240, Expect=3e-67]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=240, Expect=3e-67]} {Dmel: FBgn0261041, stj, straightjacket, [Score=271, Expect=6e-78]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=192, Expect=4e-51]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [Score=365, Expect=3e-112]} {RNA1509_24478, RNA1509_59648} {RNA1310_1519, RNA1509_59648} {RNA1509_59648, RNA815_308} Mlig455_068573 {REF} {Length: 5408} {Pfam: VWA N-terminal [PF08399.13, score=86.8]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=51.0]; von Willebrand factor type A domain [PF13768.8, score=28.1]; von Willebrand factor type A domain [PF00092.30, score=26.8]; von Willebrand factor type A domain [PF13519.8, score=25.1]; Cache domain [PF02743.20, score=18.3]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=245, Expect=1e-65]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=244, Expect=8e-66]} {Dmel: FBgn0261041, stj, straightjacket, [Score=335, Expect=4e-95]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=192, Expect=2e-49]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [Score=437, Expect=1e-131]} {RNA1509_24478} {RNA1310_1519} {RNA815_308}
3.	MligTC455_48685	235	4.9	Mlig455_029936	Neo: - Age: Down-Up-Down Region-enriched R5: 2.194/0.00270	B4GALT4	1.742	-	0.784	-	-	-	0.958	Mlig455_029936 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=107.0]; N-terminal domain of galactosyltransferase [PF02709.16, score=59.1]} {Human: ENSG00000121578, B4GALT4, beta-1,4-galactosyltransferase 4, [Score=161, Expect=5e-46]} {Mouse: ENSMUSG00000022793, B4galt4, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4, [Score=155, Expect=4e-44]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=153, Expect=1e-42]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=157, Expect=2e-44]} {Smed: dd_Smed_v6_9651_0_1, dd_Smed_v6_9651_0_1, [Score=160, Expect=3e-45]} {RNA1509_50662} {RNA1310_19457} {RNA815_4062}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_34105

236

4.91

Mlig455_058228

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.911/0.00007

CACNA2D3

1.000

MligTC455_34106

703

14.65

Mlig455_044525, Mlig455_062524, Mlig455_068573

Neo: Irradiation

Age: -

Region-enriched R5: 1.717/0.00109

CACNA2D3

5.925

0.999

0.997

0.966

0.969

0.995

Mlig455_044525 {REF} {Length: 5598} {Pfam: VWA N-terminal [PF08399.13, score=86.8]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=52.2]; von Willebrand factor type A domain [PF13768.8, score=28.1]; von Willebrand factor type A domain [PF13519.8, score=25.8]; von Willebrand factor type A domain [PF00092.30, score=25.6]; Cache domain [PF02743.20, score=18.5]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=246, Expect=4e-66]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=245, Expect=5e-66]} {Dmel: FBgn0261041, stj, straightjacket, [Score=335, Expect=5e-95]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=192, Expect=3e-49]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [RH, Score=439, Expect=2e-132]} {RNA1509_24478} {RNA1310_1519} {RNA815_308}

Mlig455_062524 {REF} {Length: 4806} {Pfam: VWA N-terminal [PF08399.13, score=88.0]; von Willebrand factor type A domain [PF13768.8, score=29.6]; von Willebrand factor type A domain [PF13519.8, score=27.1]; von Willebrand factor type A domain [PF00092.30, score=27.0]; Cache domain [PF02743.20, score=19.6]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=240, Expect=3e-67]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=240, Expect=3e-67]} {Dmel: FBgn0261041, stj, straightjacket, [Score=271, Expect=6e-78]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=192, Expect=4e-51]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [Score=365, Expect=3e-112]} {RNA1509_24478, RNA1509_59648} {RNA1310_1519, RNA1509_59648} {RNA1509_59648, RNA815_308}

Mlig455_068573 {REF} {Length: 5408} {Pfam: VWA N-terminal [PF08399.13, score=86.8]; Neuronal voltage-dependent calcium channel alpha 2acd [PF08473.13, score=51.0]; von Willebrand factor type A domain [PF13768.8, score=28.1]; von Willebrand factor type A domain [PF00092.30, score=26.8]; von Willebrand factor type A domain [PF13519.8, score=25.1]; Cache domain [PF02743.20, score=18.3]} {Human: ENSG00000157445, CACNA2D3, calcium voltage-gated channel auxiliary subunit alpha2delta 3, [Score=245, Expect=1e-65]} {Mouse: ENSMUSG00000021991, Cacna2d3, calcium channel, voltage-dependent, alpha2/delta subunit 3, [Score=244, Expect=8e-66]} {Dmel: FBgn0261041, stj, straightjacket, [Score=335, Expect=4e-95]} {Celegans: WBGene00006772, unc-36, Voltage-dependent calcium channel unc-36, [Score=192, Expect=2e-49]} {Smed: dd_Smed_v6_8926_0_2, dd_Smed_v6_8926_0_2, [Score=437, Expect=1e-131]} {RNA1509_24478} {RNA1310_1519} {RNA815_308}

MligTC455_48685

235

4.9

Mlig455_029936

Neo: -

Age: Down-Up-Down

Region-enriched R5: 2.194/0.00270

B4GALT4

1.742

0.784

0.958

Mlig455_029936 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=107.0]; N-terminal domain of galactosyltransferase [PF02709.16, score=59.1]} {Human: ENSG00000121578, B4GALT4, beta-1,4-galactosyltransferase 4, [Score=161, Expect=5e-46]} {Mouse: ENSMUSG00000022793, B4galt4, UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4, [Score=155, Expect=4e-44]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=153, Expect=1e-42]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=157, Expect=2e-44]} {Smed: dd_Smed_v6_9651_0_1, dd_Smed_v6_9651_0_1, [Score=160, Expect=3e-45]} {RNA1509_50662} {RNA1310_19457} {RNA815_4062}