TomoSeq data search

Data search

Results for MligTC455_34121

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34121

715

14.90

Mlig455_028082

Neo: -

Age: -

PPP2R2A

Mlig455_028082 {REF} {Length: 5249} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=42.2]} {Human: ENSG00000221914, PPP2R2A, protein phosphatase 2 regulatory subunit Balpha, [RH, Score=587, Expect=0.0]; ENSG00000156475, PPP2R2B, protein phosphatase 2 regulatory subunit Bbeta, [RH, Score=585, Expect=0.0]; ENSG00000175470, PPP2R2D, protein phosphatase 2 regulatory subunit Bdelta, [RH, Score=584, Expect=0.0]; ENSG00000074211, PPP2R2C, protein phosphatase 2 regulatory subunit Bgamma, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000022052, Ppp2r2a, protein phosphatase 2, regulatory subunit B, alpha, [RH, Score=587, Expect=0.0]; ENSMUSG00000041769, Ppp2r2d, protein phosphatase 2, regulatory subunit B, delta, [RH, Score=582, Expect=0.0]; ENSMUSG00000024500, Ppp2r2b, protein phosphatase 2, regulatory subunit B, beta, [RH, Score=570, Expect=0.0]} {Dmel: FBgn0004889, tws, twins, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00006352, sur-6, Serine/threonine-protein phosphatase 2A regulatory subunit sur-6, [RH, Score=562, Expect=0.0]} {Smed: dd_Smed_v6_5857_0_1, dd_Smed_v6_5857_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_13626, RNA1509_21675, RNA1509_39445} {RNA1310_4564, RNA1509_13626, RNA1509_21675, RNA1509_39445} {RNA1509_13626, RNA1509_21675, RNA1509_39445, RNA815_3067}

Cumulative graph for MligTC455_34121

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.969	4.318	0.41828	1.00000
RegionR2	0.299	4.318	0.49539	0.87641
RegionR3	0.109	4.318	0.75288	1.00000
RegionR4	0.492	4.318	0.23309	0.52710
RegionR5	0.518	4.318	0.08344	0.26976
RegionR6	0.168	4.318	0.63197	1.00000
RegionR7	0.168	4.318	0.71771	1.00000
RegionR8	-0.784	4.318	0.23226	0.84628

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.25	4.318	0.44369	1.00000
RegenerationR2	0.135	4.318	0.69139	0.95337
RegenerationR3	0.218	4.318	0.57049	0.89425
RegenerationR4	-0.187	4.318	0.62924	0.92299
RegenerationR5	-0.154	4.318	0.64374	0.92926
RegenerationR6	0.198	4.318	0.60524	0.87129
RegenerationBL	-0.754	4.318	0.22848	0.57863
RegenerationTP	0.31	4.318	0.58108	0.95029

Genes with expression patterns similar to MligTC455_34121

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34121	715	14.9	Mlig455_028082	Neo: - Age: -	PPP2R2A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028082 {REF} {Length: 5249} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=42.2]} {Human: ENSG00000221914, PPP2R2A, protein phosphatase 2 regulatory subunit Balpha, [RH, Score=587, Expect=0.0]; ENSG00000156475, PPP2R2B, protein phosphatase 2 regulatory subunit Bbeta, [RH, Score=585, Expect=0.0]; ENSG00000175470, PPP2R2D, protein phosphatase 2 regulatory subunit Bdelta, [RH, Score=584, Expect=0.0]; ENSG00000074211, PPP2R2C, protein phosphatase 2 regulatory subunit Bgamma, [RH, Score=561, Expect=0.0]} {Mouse: ENSMUSG00000022052, Ppp2r2a, protein phosphatase 2, regulatory subunit B, alpha, [RH, Score=587, Expect=0.0]; ENSMUSG00000041769, Ppp2r2d, protein phosphatase 2, regulatory subunit B, delta, [RH, Score=582, Expect=0.0]; ENSMUSG00000024500, Ppp2r2b, protein phosphatase 2, regulatory subunit B, beta, [RH, Score=570, Expect=0.0]} {Dmel: FBgn0004889, tws, twins, [RH, Score=582, Expect=0.0]} {Celegans: WBGene00006352, sur-6, Serine/threonine-protein phosphatase 2A regulatory subunit sur-6, [RH, Score=562, Expect=0.0]} {Smed: dd_Smed_v6_5857_0_1, dd_Smed_v6_5857_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_13626, RNA1509_21675, RNA1509_39445} {RNA1310_4564, RNA1509_13626, RNA1509_21675, RNA1509_39445} {RNA1509_13626, RNA1509_21675, RNA1509_39445, RNA815_3067}
2.	MligTC455_34122	739	15.39	Mlig455_028264	Neo: - Age: -	PPP2R2A	4.508	0.872	0.989	0.893	0.949	-	0.805	Mlig455_028264 {REF} {Length: 5311} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=21.7]} {Human: ENSG00000221914, PPP2R2A, protein phosphatase 2 regulatory subunit Balpha, [Score=310, Expect=2e-104]; ENSG00000156475, PPP2R2B, protein phosphatase 2 regulatory subunit Bbeta, [Score=310, Expect=2e-104]; ENSG00000074211, PPP2R2C, protein phosphatase 2 regulatory subunit Bgamma, [Score=310, Expect=2e-104]; ENSG00000175470, PPP2R2D, protein phosphatase 2 regulatory subunit Bdelta, [Score=308, Expect=2e-103]} {Mouse: ENSMUSG00000024500, Ppp2r2b, protein phosphatase 2, regulatory subunit B, beta, [Score=310, Expect=1e-104]; ENSMUSG00000022052, Ppp2r2a, protein phosphatase 2, regulatory subunit B, alpha, [Score=310, Expect=1e-104]; ENSMUSG00000029120, Ppp2r2c, protein phosphatase 2, regulatory subunit B, gamma, [Score=308, Expect=2e-103]; ENSMUSG00000041769, Ppp2r2d, protein phosphatase 2, regulatory subunit B, delta, [Score=306, Expect=5e-105]} {Dmel: FBgn0004889, tws, twins, [Score=305, Expect=9e-103]} {Celegans: WBGene00006352, sur-6, Serine/threonine-protein phosphatase 2A regulatory subunit sur-6, [Score=301, Expect=1e-100]} {Smed: dd_Smed_v6_5857_0_1, dd_Smed_v6_5857_0_1, [Score=270, Expect=1e-88]} {RNA1509_12336, RNA1509_13626, RNA1509_24941, RNA1509_51995} {RNA1310_4564, RNA1509_12336, RNA1509_24941, RNA1509_51995} {RNA1509_12336, RNA1509_24941, RNA1509_51995, RNA815_3067}
3.	MligTC455_14648	394	8.21	Mlig455_006859	Neo: - Age: logFC(26M/2M)=0.300	CLPB	1.752	-	-	-	0.795	-	0.957	Mlig455_006859 {REF} {Length: 4077} {TRANSSPLICED} {Pfam: AAA domain (Cdc48 subfamily) [PF07724.16, score=137.2]; Ankyrin repeat [PF00023.32, score=52.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=48.3]; Ankyrin repeats (3 copies) [PF12796.9, score=45.3]; Ankyrin repeat [PF13606.8, score=40.3]; Ankyrin repeats (many copies) [PF13637.8, score=35.3]; C-terminal, D2-small domain, of ClpB protein [PF10431.11, score=31.8]; Ankyrin repeats (many copies) [PF13857.8, score=30.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=29.8]; AAA domain [PF13401.8, score=26.5]; AAA ATPase domain [PF13191.8, score=23.4]; Sigma-54 interaction domain [PF00158.28, score=20.6]} {Human: ENSG00000162129, CLPB, ClpB homolog, mitochondrial AAA ATPase chaperonin, [RH, Score=522, Expect=1e-177]} {Mouse: ENSMUSG00000001829, Clpb, ClpB caseinolytic peptidase B, [RH, Score=525, Expect=4e-179]} {Dmel: FBgn0039075, CG4393, [Score=53.9, Expect=5e-07]} {Smed: dd_Smed_v6_7341_0_1, dd_Smed_v6_7341_0_1, [RH, Score=508, Expect=4e-174]} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1310_12205.1, RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365} {RNA1509_24624, RNA1509_48777, RNA1509_49644, RNA1509_56365, RNA815_4340}
4.	MligTC455_53443	302	6.3	Mlig455_057740	Neo: - Age: logFC(26M/2M)=0.560	NUP98	0.967	-	-	-	-	-	0.967	Mlig455_057740 {REF} {Length: 3802} {TRANSSPLICED} {Pfam: Nuclear protein 96 [PF12110.10, score=234.9]} {Human: ENSG00000110713, NUP98, nucleoporin 98, [RH, Score=224, Expect=1e-62]} {Mouse: ENSMUSG00000063550, Nup98, nucleoporin 98, [RH, Score=239, Expect=3e-66]} {Dmel: FBgn0039120, Nup98-96, Nucleoporin 98-96kD, [RH, Score=212, Expect=4e-57]} {Celegans: WBGene00003796, npp-10, Nuclear pore complex protein Nup98-Nup96 Nuclear pore complex protein Nup98 Nuclear pore complex protein Nup96, [RH, Score=124, Expect=1e-28]} {Smed: dd_Smed_v6_5347_0_1, dd_Smed_v6_5347_0_1, [RH, Score=196, Expect=3e-52]} {RNA1509_11771} {RNA1310_8788} {RNA815_6858}
5.	MligTC455_46508	553	11.53	Mlig455_039158	Neo: - Age: - Region-enriched R4: 3.087/0.02676		0.965	-	-	-	-	-	0.965	Mlig455_039158 {REF} {Length: 2537} {Pfam: Lysosomal transcription factor, NCU-G1 [PF15065.8, score=241.7]} {Smed: dd_Smed_v6_2685_0_1, dd_Smed_v6_2685_0_1, [RH, Score=139, Expect=1e-36]} {RNA1509_23056, RNA1509_24004, RNA1509_36817, RNA1509_7566} {RNA1310_18836, RNA1509_23056, RNA1509_24004, RNA1509_36817} {RNA1509_23056, RNA1509_24004, RNA1509_36817, RNA815_9023}
6.	MligTC455_49992	377	7.85	Mlig455_030016	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_030016 {REF} {Length: 5191} {TRANSSPLICED} {RNA1509_16544, RNA1509_31079, RNA1509_38970} {RNA1310_6208.1, RNA1509_16544, RNA1509_31079, RNA1509_38970} {RNA1509_16544, RNA1509_31079, RNA1509_38970, RNA815_18742}
7.	MligTC455_33341	1458	30.37	Mlig455_032573	Neo: - Age: Up-Down-Down	CBL	0.961	-	-	-	-	-	0.961	Mlig455_032573 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: CBL proto-oncogene N-terminus, EF hand-like domain [PF02761.16, score=106.4]; CBL proto-oncogene N-terminus, SH2-like domain [PF02762.16, score=92.4]; CBL proto-oncogene N-terminal domain 1 [PF02262.18, score=72.7]; Prokaryotic RING finger family 4 [PF14447.8, score=49.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=42.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.8]; Ring finger domain [PF13639.8, score=28.3]; RING-type zinc-finger [PF13445.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=18.8]} {Human: ENSG00000110395, CBL, Cbl proto-oncogene, [Score=342, Expect=8e-108]; ENSG00000114423, CBLB, Cbl proto-oncogene B, [Score=337, Expect=1e-105]} {Mouse: ENSMUSG00000034342, Cbl, Casitas B-lineage lymphoma, [Score=344, Expect=2e-108]; ENSMUSG00000022637, Cblb, Casitas B-lineage lymphoma b, [Score=337, Expect=2e-105]} {Dmel: FBgn0020224, Cbl, Cbl proto-oncogene, [Score=325, Expect=3e-106]} {Celegans: WBGene00004829, sli-1, Sli-1 protein; Suppressor of LIneage defect, [Score=289, Expect=2e-91]} {Smed: dd_Smed_v6_6780_0_1, dd_Smed_v6_6780_0_1, [Score=281, Expect=4e-88]} {RNA1509_11760, RNA1509_34426, RNA1509_9322} {RNA1310_7631.1, RNA1509_11760, RNA1509_34426, RNA1509_9322} {RNA1509_11760, RNA1509_34426, RNA1509_9322, RNA815_3518}
8.	MligTC455_23552	539	11.23	Mlig455_020886	Neo: Irradiation Age: -	CSNK1G1	0.957	-	-	-	-	-	0.957	Mlig455_020886 {REF} {Length: 4055} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=100.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.0]; Fungal protein kinase [PF17667.3, score=29.4]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=527, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=524, Expect=0.0]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=535, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=520, Expect=0.0]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=515, Expect=0.0]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=513, Expect=0.0]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=462, Expect=1e-161]} {RNA1509_20026, RNA1509_31077} {RNA1310_19544.3, RNA1509_31077} {RNA1509_31077, RNA815_13120.1}
9.	MligTC455_42332	831	17.32	Mlig455_049097	Neo: Int S/G2/M Age: -	HARS	0.957	-	-	-	-	-	0.957	Mlig455_049097 {REF} {Length: 3093} {TRANSSPLICED} {Pfam: Histidyl-tRNA synthetase [PF13393.8, score=151.2]; Anticodon binding domain [PF03129.22, score=47.6]} {Human: ENSG00000170445, HARS, histidyl-tRNA synthetase, [RH, Score=530, Expect=0.0]} {Mouse: ENSMUSG00000001380, Hars, histidyl-tRNA synthetase, [RH, Score=534, Expect=0.0]} {Dmel: FBgn0027087, HisRS, Histidyl-tRNA synthetase, [RH, Score=492, Expect=2e-170]} {Celegans: WBGene00002001, hars-1, Histidine--tRNA ligase, [RH, Score=439, Expect=9e-150]} {Smed: dd_Smed_v6_1304_0_2, dd_Smed_v6_1304_0_2, [RH, Score=435, Expect=6e-144]} {RNA1509_26856, RNA1509_4721} {RNA1310_6281, RNA1509_26856, RNA1509_4721} {RNA1509_26856, RNA1509_4721, RNA815_6780}
10.	MligTC455_14883	116	2.43	Mlig455_026039, Mlig455_064434	Neo: - Age: -	CALML3	0.956	-	-	-	-	0.956	-	Mlig455_026039 {REF} {Length: 1444} {Pfam: EF hand [PF00036.34, score=58.4]; EF-hand domain pair [PF13499.8, score=57.2]; EF-hand domain [PF13405.8, score=48.7]; EF hand [PF13202.8, score=44.0]; EF-hand domain pair [PF13833.8, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=21.0]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=64.3, Expect=2e-13]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=72.8, Expect=7e-17]} {Dmel: FBgn0033238, azot, ahuizotl, [Score=50.8, Expect=2e-08]} {Celegans: WBGene00000287, cal-3, CALmodulin related genes, [Score=57.4, Expect=5e-11]} {Smed: dd_Smed_v6_4512_0_2, dd_Smed_v6_4512_0_2, [Score=50.1, Expect=3e-08]} {RNA1310_61122} {RNA815_63946} Mlig455_064434 {REF} {Length: 1538} {Pfam: EF hand [PF00036.34, score=26.6]; EF-hand domain [PF13405.8, score=26.5]; EF hand [PF13202.8, score=23.9]; EF-hand domain pair [PF13499.8, score=20.8]} {RNA1310_61122} {RNA815_63946}
11.	MligTC455_33882	644	13.41	Mlig455_055943	Neo: - Age: -	STX12	0.955	-	-	-	-	-	0.955	Mlig455_055943 {REF} {Length: 3583} {TRANSSPLICED} {Pfam: SNARE domain [PF05739.21, score=62.2]; Syntaxin-like protein [PF14523.8, score=58.6]} {Human: ENSG00000117758, STX12, syntaxin 12, [Score=132, Expect=1e-36]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [Score=126, Expect=1e-34]; ENSMUSG00000028879, Stx12, syntaxin 12, [Score=125, Expect=2e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [Score=108, Expect=8e-28]} {Celegans: WBGene00009478, syx-7, SYntaXin, [Score=95.9, Expect=2e-23]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [Score=107, Expect=4e-28]} {RNA1509_15629, RNA1509_38250, RNA1509_55825} {RNA1310_27494, RNA1509_15629, RNA1509_55825} {RNA1509_15629, RNA1509_55825, RNA815_14197}
12.	MligTC455_23551	537	11.19	Mlig455_007655	Neo: - Age: -	CSNK1G1	0.954	-	-	-	-	-	0.954	Mlig455_007655 {REF} {Length: 4258} {Pfam: Protein kinase domain [PF00069.27, score=100.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=55.0]; Fungal protein kinase [PF17667.3, score=29.3]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=527, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=521, Expect=0.0]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=535, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=518, Expect=0.0]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=508, Expect=4e-178]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=512, Expect=0.0]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=462, Expect=2e-161]} {RNA1509_16024, RNA1509_20026} {RNA1310_20582.1, RNA1509_16024} {RNA1509_16024, RNA815_13120.1}
13.	MligTC455_39984	512	10.67	Mlig455_039849	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_039849 {REF} {Length: 887} {RNA1509_47643} {RNA1310_53943, RNA1509_47643} {RNA1509_47643, RNA815_31128}
14.	MligTC455_51346	1159	24.15	Mlig455_069672	Neo: - Age: Up-Down-Up	PRDX5	0.952	-	-	-	-	-	0.952	Mlig455_069672 {REF} {Length: 1869} {TRANSSPLICED} {Pfam: Redoxin [PF08534.12, score=108.5]; AhpC/TSA family [PF00578.23, score=44.1]} {Human: ENSG00000126432, PRDX5, peroxiredoxin 5, [Score=132, Expect=8e-39]} {Mouse: ENSMUSG00000024953, Prdx5, peroxiredoxin 5, [Score=123, Expect=2e-35]} {Dmel: FBgn0038570, Prx5, Peroxiredoxin 5, [Score=139, Expect=4e-42]} {Smed: dd_Smed_v6_1290_0_1, dd_Smed_v6_1290_0_1, [Score=157, Expect=2e-49]} {RNA1509_41717, RNA1509_58546} {RNA1310_37609, RNA1509_41717, RNA1509_58546} {RNA1509_41717, RNA1509_58546, RNA815_25605}

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