TomoSeq data search

Data search

Results for MligTC455_34146

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34146

2994

62.38

Mlig455_009833

Neo: -

Age: logFC(26M/2M)=0.723

RPL39

Mlig455_009833 {REF} {Length: 346} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=74.4]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=82.4, Expect=8e-23]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=82.4, Expect=5e-23]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=78.6, Expect=1e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=72.4, Expect=3e-19]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=73.6, Expect=8e-20]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=75.5, Expect=1e-20]} {RNA1509_39602} {RNA1310_92891} {RNA815_52027}

Cumulative graph for MligTC455_34146

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.703	6.067	0.03654	0.47198
RegionR2	0.309	6.067	0.51890	0.89385
RegionR3	0.746	6.067	0.06058	0.43351
RegionR4	0.015	6.067	0.97362	1.00000
RegionR5	-0.144	6.067	0.71225	1.00000
RegionR6	-0.024	6.067	0.95265	1.00000
RegionR7	0.733	6.067	0.05540	0.45284
RegionR8	0.068	6.067	0.88236	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.809	6.067	0.06678	0.74494
RegenerationR2	0.199	6.067	0.67297	0.94638
RegenerationR3	0.421	6.067	0.38981	0.79600
RegenerationR4	0.62	6.067	0.22344	0.67149
RegenerationR5	1.229	6.067	0.01273	0.19808
RegenerationR6	0.416	6.067	0.40910	0.74333
RegenerationBL	0.235	6.067	0.60134	0.94798
RegenerationTP	0.321	6.067	0.51386	0.91048

Genes with expression patterns similar to MligTC455_34146

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34146	2994	62.38	Mlig455_009833	Neo: - Age: logFC(26M/2M)=0.723	RPL39	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009833 {REF} {Length: 346} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=74.4]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=82.4, Expect=8e-23]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=82.4, Expect=5e-23]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=78.6, Expect=1e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=72.4, Expect=3e-19]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=73.6, Expect=8e-20]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=75.5, Expect=1e-20]} {RNA1509_39602} {RNA1310_92891} {RNA815_52027}
2.	MligTC455_52322	6273	130.68	Mlig455_044377	Neo: Int S/G2/M Age: - Region-enriched R4: 1.232/0.00035		1.746	-	-	-	0.974	0.772	-	Mlig455_044377 {REF} {Length: 552} {TRANSSPLICED} {RNA1509_1166, RNA1509_33190} {RNA1310_59343, RNA1509_33190} {RNA1509_33190, RNA815_30321.2}
3.	MligTC455_24071	15044	313.42	Mlig455_016654	Neo: - Age: logFC(26M/2M)=-3.446		1.708	-	-	-	0.950	0.758	-	Mlig455_016654 {REF} {Length: 294} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28400} {RNA1310_18921} {RNA815_55354}
4.	MligTC455_24072	15044	313.41	Mlig455_016722	Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.151		1.699	-	-	-	0.950	0.749	-	Mlig455_016722 {REF} {Length: 299} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_46177, RNA1509_48305} {RNA1310_18921, RNA1509_46177, RNA1509_48305} {RNA1509_46177, RNA1509_48305, RNA815_55354}
5.	MligTC455_50593	1562	32.54	Mlig455_016015, Mlig455_059733	Neo: Neoblast, stringent Age: -	TK2	0.966	-	-	-	-	0.966	-	Mlig455_016015 {REF} {Length: 1538} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=57.7]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=65.9, Expect=3e-13]} {Mouse: ENSMUSG00000014554, Dguok, deoxyguanosine kinase, [Score=62.0, Expect=4e-12]; ENSMUSG00000029366, Dck, deoxycytidine kinase, [Score=59.7, Expect=3e-11]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=70.9, Expect=1e-15]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849} Mlig455_059733 {REF} {Length: 1097} {TRANSSPLICED} {Pfam: Deoxynucleoside kinase [PF01712.21, score=167.9]; AAA domain [PF13238.8, score=31.5]; AAA domain [PF13671.8, score=24.2]} {Human: ENSG00000166548, TK2, thymidine kinase 2, mitochondrial, [Score=166, Expect=1e-49]} {Mouse: ENSMUSG00000035824, Tk2, thymidine kinase 2, mitochondrial, [Score=162, Expect=1e-48]} {Dmel: FBgn0022338, dnk, deoxyribonucleoside kinase, [Score=167, Expect=3e-51]} {RNA1509_10988} {RNA1310_30595.1} {RNA815_13849}
6.	MligTC455_27421	16305	339.68	Mlig455_031124	Neo: Int S/G2/M Age: logFC(26M/2M)=0.575	UBA52	0.956	-	-	-	0.956	-	-	Mlig455_031124 {REF} {Length: 530} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=116.3]; Ribosomal L40e family [PF01020.19, score=97.1]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=61.1]; Ubiquitin-like domain [PF14560.8, score=25.2]} {Human: ENSG00000221983, UBA52, ubiquitin A-52 residue ribosomal protein fusion product 1, [RH, Score=238, Expect=3e-82]} {Mouse: ENSMUSG00000055553, Kxd1, KxDL motif containing 1, [RH, Score=243, Expect=7e-83]; ENSMUSG00000090137, Uba52, ubiquitin A-52 residue ribosomal protein fusion product 1, [RH, Score=238, Expect=2e-82]; ENSMUSG00000068240, Gm11808, predicted gene 11808, [RH, Score=238, Expect=2e-82]} {Dmel: FBgn0003941, RpL40, Ribosomal protein L40, [RH, Score=242, Expect=3e-84]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [RH, Score=237, Expect=3e-82]} {Smed: dd_Smed_v6_176_0_1, dd_Smed_v6_176_0_1, [RH, Score=238, Expect=2e-82]} {RNA1509_9834} {RNA1310_67211} {RNA815_34465}
7.	MligTC455_27420	16180	337.09	Mlig455_031089	Neo: Int S/G2/M Age: Down-Up-Up	UBA52	0.955	-	-	-	0.955	-	-	Mlig455_031089 {REF} {Length: 526} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=116.3]; Ribosomal L40e family [PF01020.19, score=97.1]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=61.1]; Ubiquitin-like domain [PF14560.8, score=25.2]} {Human: ENSG00000221983, UBA52, ubiquitin A-52 residue ribosomal protein fusion product 1, [RH, Score=238, Expect=3e-82]} {Mouse: ENSMUSG00000055553, Kxd1, KxDL motif containing 1, [RH, Score=243, Expect=7e-83]; ENSMUSG00000090137, Uba52, ubiquitin A-52 residue ribosomal protein fusion product 1, [RH, Score=238, Expect=2e-82]; ENSMUSG00000068240, Gm11808, predicted gene 11808, [RH, Score=238, Expect=2e-82]} {Dmel: FBgn0003941, RpL40, Ribosomal protein L40, [RH, Score=242, Expect=3e-84]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [RH, Score=237, Expect=3e-82]} {Smed: dd_Smed_v6_176_0_1, dd_Smed_v6_176_0_1, [RH, Score=238, Expect=2e-82]} {RNA1509_1404, RNA1509_771, RNA1509_9834} {RNA1310_67211, RNA1509_1404, RNA1509_771, RNA1509_9834} {RNA1509_1404, RNA1509_771, RNA1509_9834, RNA815_34465}
8.	MligTC455_35212	16892	351.93	Mlig455_044941	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.224		0.951	-	-	-	0.951	-	-	Mlig455_044941 {REF} {Length: 340} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_10393, RNA1509_27766} {RNA1310_51653.1, RNA1509_10393} {RNA1509_10393, RNA815_11337}

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