TomoSeq data search

Data search

Results for MligTC455_34181

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34181

1521

31.70

Mlig455_011092

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.632/0.00035
Region-enriched R5: 1.431/0.00008

POLR2E

Mlig455_011092 {REF} {Length: 785} {TRANSSPLICED} {Pfam: RNA polymerase Rpb5, C-terminal domain [PF01191.21, score=112.2]; RNA polymerase Rpb5, N-terminal domain [PF03871.16, score=104.6]} {Human: ENSG00000099817, POLR2E, RNA polymerase II subunit E, [RH, Score=288, Expect=1e-99]} {Mouse: ENSMUSG00000004667, Polr2e, polymerase (RNA) II (DNA directed) polypeptide E, [RH, Score=293, Expect=8e-102]} {Dmel: FBgn0033571, Rpb5, [RH, Score=300, Expect=2e-104]} {Celegans: WBGene00019246, rpb-5, DNA-directed RNA polymerases I, II, and III subunit RPABC1, [RH, Score=278, Expect=1e-95]} {Smed: dd_Smed_v6_6572_0_1, dd_Smed_v6_6572_0_1, [RH, Score=199, Expect=5e-65]} {RNA1509_12333, RNA1509_29790, RNA1509_8250, RNA1509_9716} {RNA1310_29584, RNA1509_12333, RNA1509_29790, RNA1509_8250, RNA1509_9716} {RNA1509_12333, RNA1509_29790, RNA1509_8250, RNA1509_9716, RNA815_21836}

Cumulative graph for MligTC455_34181

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.806	5.208	0.30792	0.95705
RegionR2	-0.803	5.208	0.05302	0.27566
RegionR3	0.427	5.208	0.19923	0.73872
RegionR4	1.632	5.208	0.00002	0.00035
RegionR5	1.431	5.208	0.00000	0.00008
RegionR6	0.541	5.208	0.11087	0.60782
RegionR7	-0.792	5.208	0.07491	0.52839
RegionR8	-1.63	5.208	0.00420	0.11307

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.458	5.208	0.00767	0.40475
RegenerationR2	0.188	5.208	0.61966	0.92326
RegenerationR3	0.22	5.208	0.57007	0.89388
RegenerationR4	0.448	5.208	0.26741	0.71460
RegenerationR5	-0.348	5.208	0.33768	0.75614
RegenerationR6	0.413	5.208	0.28771	0.63765
RegenerationBL	0.448	5.208	0.30694	0.67161
RegenerationTP	0.557	5.208	0.27195	0.72052

Genes with expression patterns similar to MligTC455_34181

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34181	1521	31.7	Mlig455_011092	Neo: Int S/G2/M Age: - Region-enriched R4: 1.632/0.00035 Region-enriched R5: 1.431/0.00008	POLR2E	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_011092 {REF} {Length: 785} {TRANSSPLICED} {Pfam: RNA polymerase Rpb5, C-terminal domain [PF01191.21, score=112.2]; RNA polymerase Rpb5, N-terminal domain [PF03871.16, score=104.6]} {Human: ENSG00000099817, POLR2E, RNA polymerase II subunit E, [RH, Score=288, Expect=1e-99]} {Mouse: ENSMUSG00000004667, Polr2e, polymerase (RNA) II (DNA directed) polypeptide E, [RH, Score=293, Expect=8e-102]} {Dmel: FBgn0033571, Rpb5, [RH, Score=300, Expect=2e-104]} {Celegans: WBGene00019246, rpb-5, DNA-directed RNA polymerases I, II, and III subunit RPABC1, [RH, Score=278, Expect=1e-95]} {Smed: dd_Smed_v6_6572_0_1, dd_Smed_v6_6572_0_1, [RH, Score=199, Expect=5e-65]} {RNA1509_12333, RNA1509_29790, RNA1509_8250, RNA1509_9716} {RNA1310_29584, RNA1509_12333, RNA1509_29790, RNA1509_8250, RNA1509_9716} {RNA1509_12333, RNA1509_29790, RNA1509_8250, RNA1509_9716, RNA815_21836}
2.	MligTC455_19101	2050	42.7	Mlig455_025229, Mlig455_025253	Neo: Neoblast Age: Down-Up-Up	IMP3	1.723	-	0.759	-	0.964	-	-	Mlig455_025229 {REF} {Length: 863} {TRANSSPLICED} {Pfam: S4 domain [PF01479.27, score=38.3]; Ribosomal protein S4/S9 N-terminal domain [PF00163.21, score=29.7]} {Human: ENSG00000177971, IMP3, IMP3, U3 small nucleolar ribonucleoprotein, [RH, Score=232, Expect=3e-78]} {Mouse: ENSMUSG00000032288, Imp3, IMP3, U3 small nucleolar ribonucleoprotein, [RH, Score=231, Expect=6e-78]} {Dmel: FBgn0034232, CG4866, [RH, Score=194, Expect=1e-63]} {Celegans: WBGene00016740, C48B6.2, Putative 40S ribosomal protein S4-like, [RH, Score=174, Expect=8e-56]} {Smed: dd_Smed_v6_5444_0_1, dd_Smed_v6_5444_0_1, [RH, Score=191, Expect=9e-63]} {RNA1509_11753} {RNA1310_34671} {RNA815_20105} Mlig455_025253 {REF} {Length: 854} {TRANSSPLICED} {Pfam: S4 domain [PF01479.27, score=38.3]; Ribosomal protein S4/S9 N-terminal domain [PF00163.21, score=29.7]} {Human: ENSG00000177971, IMP3, IMP3, U3 small nucleolar ribonucleoprotein, [RH, Score=232, Expect=3e-78]} {Mouse: ENSMUSG00000032288, Imp3, IMP3, U3 small nucleolar ribonucleoprotein, [RH, Score=231, Expect=6e-78]} {Dmel: FBgn0034232, CG4866, [RH, Score=194, Expect=1e-63]} {Celegans: WBGene00016740, C48B6.2, Putative 40S ribosomal protein S4-like, [RH, Score=174, Expect=8e-56]} {Smed: dd_Smed_v6_5444_0_1, dd_Smed_v6_5444_0_1, [RH, Score=191, Expect=9e-63]} {RNA1509_11753} {RNA1310_34671, RNA1509_11753} {RNA1509_11753, RNA815_20105}
3.	MligTC455_13152	336	7.01	Mlig455_051178, Mlig455_062977, Mlig455_062984	Neo: - Age: Down-Up-Up Region-enriched R3: 2.190/0.00977	SRR	1.698	-	-	-	0.742	0.956	-	Mlig455_051178 {REF} {Length: 1860} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=236.3]} {Human: ENSG00000167720, SRR, serine racemase, [RH, Score=234, Expect=2e-74]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [RH, Score=209, Expect=7e-65]} {Dmel: FBgn0037684, CG8129, [Score=121, Expect=1e-30]} {Celegans: WBGene00011353, T01H8.2, [RH, Score=219, Expect=2e-69]} {Smed: dd_Smed_v6_13906_1_1, dd_Smed_v6_13906_1_1, [RH, Score=306, Expect=2e-103]} {RNA1509_38217} {RNA1310_2456.1, RNA1509_38217} {RNA1509_38217, RNA815_25465} Mlig455_062977 {REF} {Length: 1044} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=192.5]} {Human: ENSG00000167720, SRR, serine racemase, [Score=221, Expect=2e-69]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=196, Expect=8e-60]} {Dmel: FBgn0037684, CG8129, [Score=104, Expect=7e-25]} {Celegans: WBGene00011353, T01H8.2, [Score=186, Expect=2e-56]} {Smed: dd_Smed_v6_13906_1_1, dd_Smed_v6_13906_1_1, [RH, Score=294, Expect=8e-99]} {RNA1509_38217} {RNA1310_2456.1} {RNA815_25465} Mlig455_062984 {REF} {Length: 1044} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=192.5]} {Human: ENSG00000167720, SRR, serine racemase, [Score=221, Expect=2e-69]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=196, Expect=8e-60]} {Dmel: FBgn0037684, CG8129, [Score=104, Expect=7e-25]} {Celegans: WBGene00011353, T01H8.2, [Score=186, Expect=2e-56]} {Smed: dd_Smed_v6_13906_1_1, dd_Smed_v6_13906_1_1, [RH, Score=294, Expect=8e-99]} {RNA1509_38217} {RNA1310_2456.1} {RNA815_25465}
4.	MligTC455_44619	1355	28.24	Mlig455_011439	Neo: - Age: logFC(26M/2M)=0.207 Regeneration-upregulated BL: 2.023 Regeneration-enriched BL: 2.023	ECI2	1.692	-	-	-	0.956	0.736	-	Mlig455_011439 {REF} {Length: 1546} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=133.3]; Acyl CoA binding protein [PF00887.21, score=88.8]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=72.9]} {Human: ENSG00000198721, ECI2, enoyl-CoA delta isomerase 2, [RH, Score=352, Expect=2e-119]} {Mouse: ENSMUSG00000021417, Eci2, enoyl-Coenzyme A delta isomerase 2, [RH, Score=352, Expect=1e-119]} {Dmel: FBgn0035169, CG13890, [RH, Score=161, Expect=6e-47]} {Celegans: WBGene00001153, ech-4, Enoyl-CoA Hydratase, [RH, Score=277, Expect=3e-90]} {Smed: dd_Smed_v6_5239_0_1, dd_Smed_v6_5239_0_1, [RH, Score=423, Expect=8e-148]} {RNA1509_3390} {RNA1310_18160, RNA1509_3390} {RNA1509_3390, RNA815_6994}
5.	MligTC455_21321	3262	67.96	Mlig455_020289	Neo: Int S/G2/M Age: Down-Down-Up Region-enriched R5: 1.162/0.00000	TMX1	1.679	-	0.716	-	0.963	-	-	Mlig455_020289 {REF} {Length: 3720} {TRANSSPLICED} {Pfam: Thioredoxin [PF00085.22, score=63.3]} {Human: ENSG00000139921, TMX1, thioredoxin related transmembrane protein 1, [RH, Score=145, Expect=2e-41]} {Mouse: ENSMUSG00000021072, Tmx1, thioredoxin-related transmembrane protein 1, [RH, Score=144, Expect=2e-41]} {Dmel: FBgn0034914, CG5554, [RH, Score=153, Expect=2e-44]} {Celegans: WBGene00001073, dpy-11, DumPY: shorter than wild-type; Thioredoxin-like protein DPY-11, [RH, Score=137, Expect=3e-39]} {Smed: dd_Smed_v6_10003_0_1, dd_Smed_v6_10003_0_1, [Score=73.6, Expect=8e-15]} {RNA1509_18453, RNA1509_28629, RNA1509_38564} {RNA1310_29016.1, RNA1509_18453, RNA1509_28629, RNA1509_38564} {RNA1509_18453, RNA1509_28629, RNA1509_38564, RNA815_12579}
6.	MligTC455_37151	163	3.39	Mlig455_053932	Neo: - Age: Up-Down-Down Region-enriched R3: 3.729/0.00702 Region-enriched R4: 3.686/0.00523	CLCA1	1.673	-	-	-	0.722	0.951	-	Mlig455_053932 {REF} {Length: 3560} {Pfam: Calcium-activated chloride channel N terminal [PF08434.13, score=87.3]; von Willebrand factor type A domain [PF00092.30, score=61.7]; von Willebrand factor type A domain [PF13519.8, score=53.1]; Cornifin (SPRR) family [PF02389.17, score=19.0]} {Human: ENSG00000016490, CLCA1, chloride channel accessory 1, [Score=215, Expect=5e-57]} {Mouse: ENSMUSG00000028255, Clca1, chloride channel accessory 1, [Score=205, Expect=6e-54]} {Dmel: FBgn0050069, CG30069, [Score=52.4, Expect=3e-06]} {Smed: dd_Smed_v6_696_0_1, dd_Smed_v6_696_0_1, [RH, Score=127, Expect=1e-29]} {RNA1509_38930} {RNA1310_8389, RNA1509_38930} {RNA1509_38930, RNA815_42050}
7.	MligTC455_41653	250	5.22	Mlig455_005803, Mlig455_005831	Neo: - Age: logFC(26M/2M)=-0.376	KCTD3	0.963	-	-	-	-	0.963	-	Mlig455_005803 {REF} {Length: 2933} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=79.9]} {Human: ENSG00000136636, KCTD3, potassium channel tetramerization domain containing 3, [RH, Score=514, Expect=3e-173]} {Mouse: ENSMUSG00000026608, Kctd3, potassium channel tetramerisation domain containing 3, [RH, Score=513, Expect=1e-172]} {Dmel: FBgn0037758, CG9467, [RH, Score=363, Expect=8e-116]} {Celegans: WBGene00020721, T23B12.6, [RH, Score=365, Expect=2e-117]} {Smed: dd_Smed_v6_3856_0_1, dd_Smed_v6_3856_0_1, [RH, Score=265, Expect=2e-78]} {RNA1509_47253} {RNA1310_12536} {RNA815_15392} Mlig455_005831 {REF} {Length: 2953} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=79.9]} {Human: ENSG00000136636, KCTD3, potassium channel tetramerization domain containing 3, [RH, Score=513, Expect=8e-173]} {Mouse: ENSMUSG00000026608, Kctd3, potassium channel tetramerisation domain containing 3, [RH, Score=512, Expect=2e-172]} {Dmel: FBgn0037758, CG9467, [RH, Score=362, Expect=1e-115]} {Celegans: WBGene00020721, T23B12.6, [RH, Score=365, Expect=1e-117]} {Smed: dd_Smed_v6_3856_0_1, dd_Smed_v6_3856_0_1, [RH, Score=266, Expect=8e-79]} {RNA1509_47253, RNA1509_53266} {RNA1310_12536, RNA1509_47253, RNA1509_53266} {RNA1509_47253, RNA1509_53266, RNA815_15392}
8.	MligTC455_44918	1704	35.51	Mlig455_025542, Mlig455_025560	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 2.709/0.00000	ZNHIT6	0.963	-	-	-	0.963	-	-	Mlig455_025542 {REF} {Length: 1349} {TRANSSPLICED} {Pfam: HIT zinc finger [PF04438.18, score=28.3]} {RNA1509_23772, RNA1509_24104} {RNA1310_32464.1, RNA1509_23772, RNA1509_24104} {RNA1509_23772, RNA1509_24104, RNA815_11459} Mlig455_025560 {REF} {Length: 1347} {TRANSSPLICED} {Pfam: HIT zinc finger [PF04438.18, score=27.8]} {Human: ENSG00000117174, ZNHIT6, zinc finger HIT-type containing 6, [RH, Score=96.7, Expect=2e-21]} {Mouse: ENSMUSG00000074182, Znhit6, zinc finger, HIT type 6, [RH, Score=99.8, Expect=1e-22]} {Dmel: FBgn0030406, CG1463, [RH, Score=67.4, Expect=3e-12]} {Smed: dd_Smed_v6_15655_0_1, dd_Smed_v6_15655_0_1, [RH, Score=82.4, Expect=5e-18]} {RNA1509_24104, RNA1509_29293, RNA1509_53055} {RNA1310_32464.1, RNA1509_29293, RNA1509_53055} {RNA1509_29293, RNA1509_53055, RNA815_11459}
9.	MligTC455_29209	507	10.56	Mlig455_014725	Neo: - Age: -	APBA1	0.96	-	-	-	-	0.960	-	Mlig455_014725 {REF} {Length: 7049} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=140.1]; PDZ domain [PF00595.26, score=89.2]; PDZ domain [PF17820.3, score=55.3]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=496, Expect=4e-162]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=494, Expect=1e-162]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=491, Expect=2e-165]} {Mouse: ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=496, Expect=6e-162]; ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=492, Expect=7e-162]} {Dmel: FBgn0052677, X11Lbeta, [RH, Score=572, Expect=9e-180]} {Celegans: WBGene00002999, lin-10, [RH, Score=552, Expect=0.0]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [RH, Score=631, Expect=0.0]} {RNA1509_48945} {RNA1310_6524} {RNA815_2382}
10.	MligTC455_16331	7656	159.49	Mlig455_071065	Neo: Int S/G2/M Age: -	FBP1	0.953	-	-	-	0.953	-	-	Mlig455_071065 {REF} {Length: 1305} {TRANSSPLICED} {Pfam: Fructose-1-6-bisphosphatase, N-terminal domain [PF00316.22, score=182.9]; Fructose-1-6-bisphosphatase, C-terminal domain [PF18913.2, score=180.5]} {Human: ENSG00000165140, FBP1, fructose-bisphosphatase 1, [RH, Score=344, Expect=1e-118]; ENSG00000130957, FBP2, fructose-bisphosphatase 2, [RH, Score=335, Expect=7e-115]} {Mouse: ENSMUSG00000069805, Fbp1, fructose bisphosphatase 1, [RH, Score=360, Expect=4e-125]; ENSMUSG00000021456, Fbp2, fructose bisphosphatase 2, [RH, Score=353, Expect=3e-122]} {Dmel: FBgn0032820, fbp, fructose-1,6-bisphosphatase, [RH, Score=365, Expect=4e-127]} {Celegans: WBGene00001404, fbp-1, Fructose-1,6-BiPhosphatase; Fructose-1,6-bisphosphatase, [RH, Score=378, Expect=3e-132]} {Smed: dd_Smed_v6_1709_0_1, dd_Smed_v6_1709_0_1, [RH, Score=397, Expect=1e-139]} {RNA1509_1338, RNA1509_43831, RNA1509_52686} {RNA1310_627.1, RNA1509_43831, RNA1509_52686} {RNA1509_43831, RNA1509_52686, RNA815_9123}

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