TomoSeq data search

Data search

Results for MligTC455_34196

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34196	808	16.84	Mlig455_054513	Neo: - Age: -	AVL9	Mlig455_054513 {REF} {Length: 5121} {TRANSSPLICED} {Pfam: Transport protein Avl9 [PF09794.11, score=167.5]} {Human: ENSG00000105778, AVL9, AVL9 cell migration associated, [Score=117, Expect=2e-27]} {Mouse: ENSMUSG00000029787, Avl9, AVL9 cell migration associated, [Score=166, Expect=2e-44]} {Dmel: FBgn0030499, CG11178, [Score=114, Expect=1e-26]} {Smed: dd_Smed_v6_6271_0_1, dd_Smed_v6_6271_0_1, [Score=85.1, Expect=2e-17]} {RNA1509_47052, RNA1509_5789} {RNA1310_14118, RNA1509_47052} {RNA1509_47052, RNA815_4477.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_34196

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.422	4.269	0.68988	1.00000
RegionR2	-0.126	4.269	0.75594	1.00000
RegionR3	-1.095	4.269	0.00313	0.06911
RegionR4	-0.384	4.269	0.31251	0.62774
RegionR5	0.143	4.269	0.61261	0.96966
RegionR6	0.062	4.269	0.84949	1.00000
RegionR7	0.657	4.269	0.12131	0.65833
RegionR8	1.165	4.269	0.02214	0.29021

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.335	4.269	0.80602	1.00000
RegenerationR2	0.083	4.269	0.79075	0.98675
RegenerationR3	0.897	4.269	0.01842	0.24808
RegenerationR4	0.268	4.269	0.44296	0.83852
RegenerationR5	0.187	4.269	0.53467	0.87677
RegenerationR6	0.333	4.269	0.33023	0.67672
RegenerationBL	0.2	4.269	0.59946	0.94697
RegenerationTP	-0.987	4.269	0.03508	0.31284

Genes with expression patterns similar to MligTC455_34196

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34196	808	16.84	Mlig455_054513	Neo: - Age: -	AVL9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_054513 {REF} {Length: 5121} {TRANSSPLICED} {Pfam: Transport protein Avl9 [PF09794.11, score=167.5]} {Human: ENSG00000105778, AVL9, AVL9 cell migration associated, [Score=117, Expect=2e-27]} {Mouse: ENSMUSG00000029787, Avl9, AVL9 cell migration associated, [Score=166, Expect=2e-44]} {Dmel: FBgn0030499, CG11178, [Score=114, Expect=1e-26]} {Smed: dd_Smed_v6_6271_0_1, dd_Smed_v6_6271_0_1, [Score=85.1, Expect=2e-17]} {RNA1509_47052, RNA1509_5789} {RNA1310_14118, RNA1509_47052} {RNA1509_47052, RNA815_4477.1}
2.	MligTC455_32136	830	17.29	Mlig455_067836	Neo: - Age: -	ITGA6	0.955	-	-	-	-	0.955	-	Mlig455_067836 {REF} {Length: 6426} {Pfam: FG-GAP repeat [PF01839.25, score=62.8]; FG-GAP-like repeat [PF13517.8, score=35.4]} {Human: ENSG00000091409, ITGA6, integrin subunit alpha 6, [Score=96.3, Expect=2e-19]} {Mouse: ENSMUSG00000034664, Itga2b, integrin alpha 2b, [Score=96.7, Expect=1e-19]} {Dmel: FBgn0034880, ItgaPS5, Integrin alphaPS5 subunit, [Score=84.0, Expect=6e-16]} {Celegans: WBGene00002081, ina-1, Integrin alpha ina-1, [Score=80.5, Expect=6e-15]} {Smed: dd_Smed_v6_8943_0_1, dd_Smed_v6_8943_0_1, [Score=77.4, Expect=4e-14]} {RNA1509_11704} {RNA1310_2037.1} {RNA815_3044}
3.	MligTC455_32665	2179	45.39	Mlig455_007885, Mlig455_007986	Neo: Germline Age: Up-Down-Down	CNOT1	0.951	-	-	-	0.951	-	-	Mlig455_007885 {REF} {Length: 8750} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.0]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.5]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=54.9]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1030, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1027, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=608, Expect=2e-178]} {RNA1509_14437} {RNA1310_186} {RNA815_2875} Mlig455_007986 {REF} {Length: 8722} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.9]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.2]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=55.5]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1027, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1025, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=607, Expect=2e-178]} {RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1310_186, RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1509_1134, RNA1509_14437, RNA1509_44674, RNA815_2875}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_34196

808

16.84

Mlig455_054513

Neo: -

Age: -

AVL9

1.000

MligTC455_32136

830

17.29

Mlig455_067836

Neo: -

Age: -

ITGA6

0.955

Mlig455_067836 {REF} {Length: 6426} {Pfam: FG-GAP repeat [PF01839.25, score=62.8]; FG-GAP-like repeat [PF13517.8, score=35.4]} {Human: ENSG00000091409, ITGA6, integrin subunit alpha 6, [Score=96.3, Expect=2e-19]} {Mouse: ENSMUSG00000034664, Itga2b, integrin alpha 2b, [Score=96.7, Expect=1e-19]} {Dmel: FBgn0034880, ItgaPS5, Integrin alphaPS5 subunit, [Score=84.0, Expect=6e-16]} {Celegans: WBGene00002081, ina-1, Integrin alpha ina-1, [Score=80.5, Expect=6e-15]} {Smed: dd_Smed_v6_8943_0_1, dd_Smed_v6_8943_0_1, [Score=77.4, Expect=4e-14]} {RNA1509_11704} {RNA1310_2037.1} {RNA815_3044}

MligTC455_32665

2179

45.39

Mlig455_007885, Mlig455_007986

Neo: Germline

Age: Up-Down-Down

CNOT1

0.951

Mlig455_007885 {REF} {Length: 8750} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.0]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.5]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=54.9]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1030, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1027, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=608, Expect=2e-178]} {RNA1509_14437} {RNA1310_186} {RNA815_2875}

Mlig455_007986 {REF} {Length: 8722} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.9]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.2]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=55.5]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1027, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1025, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=607, Expect=2e-178]} {RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1310_186, RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1509_1134, RNA1509_14437, RNA1509_44674, RNA815_2875}