Data search


search
Exact
Search

Results for MligTC455_34270

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34270 45 0.93 Mlig455_025746

Neo: -

Age: Up-Up-Down

USP12 Mlig455_025746 {REF} {Length: 2158} {Pfam: Caspase domain [PF00656.24, score=68.1]; Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=47.6]} {Human: ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=124, Expect=1e-31]; ENSG00000109189, USP46, ubiquitin specific peptidase 46, [Score=124, Expect=4e-32]} {Mouse: ENSMUSG00000054814, Usp46, ubiquitin specific peptidase 46, [Score=124, Expect=3e-32]; ENSMUSG00000029640, Usp12, ubiquitin specific peptidase 12, [Score=124, Expect=7e-32]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=122, Expect=5e-31]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=100, Expect=2e-23]} {Smed: dd_Smed_v6_6911_0_1, dd_Smed_v6_6911_0_1, [Score=114, Expect=7e-31]} {RNA1509_4081} {RNA1310_34121, RNA1509_4081} {RNA1509_4081, RNA815_10100}

Cumulative graph for MligTC455_34270

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.469 1.128 0.99957 1.00000
RegionR2 -0.344 1.128 0.79620 1.00000
RegionR3 -0.475 1.128 0.85816 1.00000
RegionR4 1.899 1.128 0.17395 0.43940
RegionR5 1.479 1.128 0.16618 0.43212
RegionR6 -2.462 1.128 0.99950 1.00000
RegionR7 1.598 1.128 0.28518 0.91901
RegionR8 0.774 1.128 0.60128 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.149 1.128 1.00000 1.00000
RegenerationR2 -0.181 1.128 0.85806 1.00000
RegenerationR3 2.232 1.128 0.08262 0.47055
RegenerationR4 0.534 1.128 0.65358 0.93496
RegenerationR5 0.055 1.128 0.97470 1.00000
RegenerationR6 2.493 1.128 0.17312 0.50547
RegenerationBL 1.748 1.128 0.18839 0.52104
RegenerationTP 1.362 1.128 0.38228 0.81704


Genes with expression patterns similar to MligTC455_34270

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34270 45 0.93 Mlig455_025746

Neo: -

Age: Up-Up-Down

USP12 2 - - - 1.000 - 1.000 Mlig455_025746 {REF} {Length: 2158} {Pfam: Caspase domain [PF00656.24, score=68.1]; Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=47.6]} {Human: ENSG00000152484, USP12, ubiquitin specific peptidase 12, [Score=124, Expect=1e-31]; ENSG00000109189, USP46, ubiquitin specific peptidase 46, [Score=124, Expect=4e-32]} {Mouse: ENSMUSG00000054814, Usp46, ubiquitin specific peptidase 46, [Score=124, Expect=3e-32]; ENSMUSG00000029640, Usp12, ubiquitin specific peptidase 12, [Score=124, Expect=7e-32]} {Dmel: FBgn0039025, Usp12-46, Ubiquitin-specific protease 12/46, [Score=122, Expect=5e-31]} {Celegans: WBGene00011216, usp-46, Ubiquitin carboxyl-terminal hydrolase 46, [Score=100, Expect=2e-23]} {Smed: dd_Smed_v6_6911_0_1, dd_Smed_v6_6911_0_1, [Score=114, Expect=7e-31]} {RNA1509_4081} {RNA1310_34121, RNA1509_4081} {RNA1509_4081, RNA815_10100}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA