TomoSeq data search

Data search

Results for MligTC455_34311

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34311	18102	377.13	Mlig455_031635	Neo: Int S/G2/M Age: -	YBX3	Mlig455_031635 {REF} {Length: 1837} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=89.3]; Ribonuclease B OB domain [PF08206.13, score=19.2]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [Score=151, Expect=2e-43]; ENSG00000065978, YBX1, Y-box binding protein 1, [Score=149, Expect=2e-42]; ENSG00000006047, YBX2, Y-box binding protein 2, [Score=144, Expect=6e-40]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [Score=154, Expect=9e-45]; ENSMUSG00000028639, Ybx1, Y box protein 1, [Score=149, Expect=2e-42]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=140, Expect=4e-39]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=148, Expect=7e-44]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=161, Expect=5e-47]} {RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {RNA1310_34972.1, RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363, RNA815_6927.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34311

18102

377.13

Mlig455_031635

Neo: Int S/G2/M

Age: -

YBX3

Mlig455_031635 {REF} {Length: 1837} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=89.3]; Ribonuclease B OB domain [PF08206.13, score=19.2]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [Score=151, Expect=2e-43]; ENSG00000065978, YBX1, Y-box binding protein 1, [Score=149, Expect=2e-42]; ENSG00000006047, YBX2, Y-box binding protein 2, [Score=144, Expect=6e-40]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [Score=154, Expect=9e-45]; ENSMUSG00000028639, Ybx1, Y box protein 1, [Score=149, Expect=2e-42]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=140, Expect=4e-39]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=148, Expect=7e-44]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=161, Expect=5e-47]} {RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {RNA1310_34972.1, RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363, RNA815_6927.1}

Cumulative graph for MligTC455_34311

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.707	8.591	0.00917	0.28337
RegionR2	0.022	8.591	0.90213	1.00000
RegionR3	0.321	8.591	0.03379	0.31764
RegionR4	0.433	8.591	0.01225	0.07101
RegionR5	0.087	8.591	0.55212	0.91301
RegionR6	0.171	8.591	0.26105	0.84862
RegionR7	-0.053	8.591	0.75081	1.00000
RegionR8	-0.275	8.591	0.15180	0.70600

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.365	8.591	0.28412	0.98374
RegenerationR2	-0.128	8.591	0.49703	0.87011
RegenerationR3	-0.153	8.591	0.42763	0.81951
RegenerationR4	-0.269	8.591	0.17781	0.61773
RegenerationR5	-0.084	8.591	0.65735	0.93469
RegenerationR6	-0.162	8.591	0.40671	0.74173
RegenerationBL	-0.171	8.591	0.34777	0.71515
RegenerationTP	-0.061	8.591	0.75756	1.00000

Genes with expression patterns similar to MligTC455_34311

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34311	18102	377.13	Mlig455_031635	Neo: Int S/G2/M Age: -	YBX3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031635 {REF} {Length: 1837} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=89.3]; Ribonuclease B OB domain [PF08206.13, score=19.2]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [Score=151, Expect=2e-43]; ENSG00000065978, YBX1, Y-box binding protein 1, [Score=149, Expect=2e-42]; ENSG00000006047, YBX2, Y-box binding protein 2, [Score=144, Expect=6e-40]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [Score=154, Expect=9e-45]; ENSMUSG00000028639, Ybx1, Y box protein 1, [Score=149, Expect=2e-42]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [Score=140, Expect=4e-39]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=148, Expect=7e-44]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [Score=161, Expect=5e-47]} {RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {RNA1310_34972.1, RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363} {RNA1509_2573, RNA1509_29342, RNA1509_38161, RNA1509_4915, RNA1509_551, RNA1509_58199, RNA1509_9040, RNA1509_9363, RNA815_6927.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts