TomoSeq data search

Data search

Results for MligTC455_34327

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34327	22	0.47	Mlig455_053720	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.543	CUBN	Mlig455_053720 {REF} {Length: 5627} {Pfam: CUB domain [PF00431.22, score=137.2]; CUB-like domain [PF02408.22, score=20.7]} {Human: ENSG00000107611, CUBN, cubilin, [Score=76.6, Expect=4e-13]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=87.4, Expect=2e-16]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=73.2, Expect=3e-12]} {Celegans: WBGene00013855, ZC116.3, Probable cubilin, [Score=50.8, Expect=1e-05]} {RNA1509_39882} {RNA1310_3219.1, RNA1509_39882} {RNA1509_39882, RNA815_2919}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34327

0.47

Mlig455_053720

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.543

CUBN

Mlig455_053720 {REF} {Length: 5627} {Pfam: CUB domain [PF00431.22, score=137.2]; CUB-like domain [PF02408.22, score=20.7]} {Human: ENSG00000107611, CUBN, cubilin, [Score=76.6, Expect=4e-13]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=87.4, Expect=2e-16]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=73.2, Expect=3e-12]} {Celegans: WBGene00013855, ZC116.3, Probable cubilin, [Score=50.8, Expect=1e-05]} {RNA1509_39882} {RNA1310_3219.1, RNA1509_39882} {RNA1509_39882, RNA815_2919}

Cumulative graph for MligTC455_34327

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.83	0.756	0.99996	1.00000
RegionR2	-4.159	0.756	0.99972	1.00000
RegionR3	-0.355	0.756	0.99989	1.00000
RegionR4	6.894	0.756	0.99986	1.00000
RegionR5	2.382	0.756	0.99989	1.00000
RegionR6	-0.142	0.756	0.99991	1.00000
RegionR7	-1.381	0.756	0.99986	1.00000
RegionR8	-1.408	0.756	0.99994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.512	0.756	0.99992	1.00000
RegenerationR2	2.204	0.756	0.22900	0.67687
RegenerationR3	1.505	0.756	0.50363	0.85860
RegenerationR4	-1.322	0.756	0.89387	1.00000
RegenerationR5	0.189	0.756	0.70888	0.95516
RegenerationR6	1.994	0.756	0.43755	0.76229
RegenerationBL	-1.581	0.756	0.99989	1.00000
RegenerationTP	2.065	0.756	0.65162	0.98968

Genes with expression patterns similar to MligTC455_34327

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34327	22	0.47	Mlig455_053720	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.543	CUBN	2	-	-	-	1.000	-	1.000	Mlig455_053720 {REF} {Length: 5627} {Pfam: CUB domain [PF00431.22, score=137.2]; CUB-like domain [PF02408.22, score=20.7]} {Human: ENSG00000107611, CUBN, cubilin, [Score=76.6, Expect=4e-13]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=87.4, Expect=2e-16]} {Dmel: FBgn0052702, Cubn, Cubilin, [Score=73.2, Expect=3e-12]} {Celegans: WBGene00013855, ZC116.3, Probable cubilin, [Score=50.8, Expect=1e-05]} {RNA1509_39882} {RNA1310_3219.1, RNA1509_39882} {RNA1509_39882, RNA815_2919}
2.	MligTC455_53482	29	0.61	Mlig455_010649	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_010649 {REF} {Length: 2831} {RNA1509_20706} {RNA1310_68970} {RNA815_35178}
3.	MligTC455_13711	42	0.87	Mlig455_028682, Mlig455_028702	Neo: - Age: Up-Down-Down		0.951	-	-	-	-	-	0.951	Mlig455_028682 {REF} {Length: 1963} {Pfam: Phage integrase family [PF00589.24, score=28.9]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1} Mlig455_028702 {REF} {Length: 2044} {Pfam: Phage integrase family [PF00589.24, score=28.6]} {RNA1509_11319} {RNA1310_18293} {RNA815_9177.1}
4.	MligTC455_14586	41	0.85	Mlig455_021826	Neo: - Age: Down-Down-Up		0.95	-	-	-	-	-	0.950	Mlig455_021826 {REF} {Length: 2345} {Pfam: NHL repeat [PF01436.23, score=29.4]} {Dmel: FBgn0265356, tn, thin, [Score=52.0, Expect=1e-06]} {RNA1310_10763.1} {RNA815_45413}