TomoSeq data search

Data search

Results for MligTC455_34425

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34425	222	4.64	Mlig455_053797	Neo: - Age: Up-Down-Up	PPOX	Mlig455_053797 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=138.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=49.3]; FAD dependent oxidoreductase [PF01266.26, score=31.0]; FAD-NAD(P)-binding [PF13454.8, score=27.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.3]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=18.2]} {Human: ENSG00000143224, PPOX, protoporphyrinogen oxidase, [RH, Score=227, Expect=4e-68]} {Mouse: ENSMUSG00000062729, Ppox, protoporphyrinogen oxidase, [RH, Score=220, Expect=1e-65]} {Dmel: FBgn0020018, Ppox, Protoporphyrinogen oxidase, [RH, Score=161, Expect=7e-44]} {Smed: dd_Smed_v6_5475_0_1, dd_Smed_v6_5475_0_1, [RH, Score=197, Expect=2e-57]} {RNA1509_49947} {RNA1310_17603} {RNA815_28328}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34425

222

4.64

Mlig455_053797

Neo: -

Age: Up-Down-Up

PPOX

Mlig455_053797 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=138.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=49.3]; FAD dependent oxidoreductase [PF01266.26, score=31.0]; FAD-NAD(P)-binding [PF13454.8, score=27.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.3]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=18.2]} {Human: ENSG00000143224, PPOX, protoporphyrinogen oxidase, [RH, Score=227, Expect=4e-68]} {Mouse: ENSMUSG00000062729, Ppox, protoporphyrinogen oxidase, [RH, Score=220, Expect=1e-65]} {Dmel: FBgn0020018, Ppox, Protoporphyrinogen oxidase, [RH, Score=161, Expect=7e-44]} {Smed: dd_Smed_v6_5475_0_1, dd_Smed_v6_5475_0_1, [RH, Score=197, Expect=2e-57]} {RNA1509_49947} {RNA1310_17603} {RNA815_28328}

Cumulative graph for MligTC455_34425

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.785	2.814	0.65092	1.00000
RegionR2	-0.526	2.814	0.45407	0.84173
RegionR3	-0.126	2.814	0.79391	1.00000
RegionR4	0.658	2.814	0.33409	0.65286
RegionR5	-0.647	2.814	0.17117	0.44106
RegionR6	-0.322	2.814	0.53023	1.00000
RegionR7	0.688	2.814	0.29036	0.92410
RegionR8	-0.511	2.814	0.55685	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.74	2.814	0.41490	1.00000
RegenerationR2	0.309	2.814	0.58579	0.90900
RegenerationR3	0.044	2.814	0.93175	1.00000
RegenerationR4	-0.998	2.814	0.13414	0.55261
RegenerationR5	0.761	2.814	0.15393	0.57374
RegenerationR6	-0.325	2.814	0.64852	0.89752
RegenerationBL	0.414	2.814	0.63068	0.97197
RegenerationTP	0.178	2.814	0.81817	1.00000

Genes with expression patterns similar to MligTC455_34425

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34425	222	4.64	Mlig455_053797	Neo: - Age: Up-Down-Up	PPOX	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053797 {REF} {Length: 2721} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=138.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=49.3]; FAD dependent oxidoreductase [PF01266.26, score=31.0]; FAD-NAD(P)-binding [PF13454.8, score=27.1]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.3]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=18.2]} {Human: ENSG00000143224, PPOX, protoporphyrinogen oxidase, [RH, Score=227, Expect=4e-68]} {Mouse: ENSMUSG00000062729, Ppox, protoporphyrinogen oxidase, [RH, Score=220, Expect=1e-65]} {Dmel: FBgn0020018, Ppox, Protoporphyrinogen oxidase, [RH, Score=161, Expect=7e-44]} {Smed: dd_Smed_v6_5475_0_1, dd_Smed_v6_5475_0_1, [RH, Score=197, Expect=2e-57]} {RNA1509_49947} {RNA1310_17603} {RNA815_28328}
2.	MligTC455_52913	139	2.9	Mlig455_032718	Neo: - Age: -		0.975	-	-	-	-	0.975	-	Mlig455_032718 {REF} {Length: 5383} {RNA1310_68685} {RNA815_58602}
3.	MligTC455_40104	165	3.45	Mlig455_008744, Mlig455_008758, Mlig455_035898	Neo: - Age: -	KCNMA1	0.967	-	-	-	-	0.967	-	Mlig455_008744 {REF} {Length: 4230} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.0]; Ion transport protein [PF00520.33, score=57.1]; Ion channel [PF07885.18, score=55.9]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205, RNA1509_45041} {RNA1509_45041, RNA815_19099} Mlig455_008758 {REF} {Length: 4229} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=103.9]; Ion transport protein [PF00520.33, score=56.3]; Ion channel [PF07885.18, score=55.6]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099} Mlig455_035898 {REF} {Length: 4325} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=574, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=595, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=583, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=621, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_34425

222

4.64

Mlig455_053797

Neo: -

Age: Up-Down-Up

PPOX

1.000

MligTC455_52913

139

2.9

Mlig455_032718

Neo: -

Age: -

0.975

Mlig455_032718 {REF} {Length: 5383} {RNA1310_68685} {RNA815_58602}

MligTC455_40104

165

3.45

Mlig455_008744, Mlig455_008758, Mlig455_035898

Neo: -

Age: -

KCNMA1

0.967

Mlig455_008744 {REF} {Length: 4230} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.0]; Ion transport protein [PF00520.33, score=57.1]; Ion channel [PF07885.18, score=55.9]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205, RNA1509_45041} {RNA1509_45041, RNA815_19099}

Mlig455_008758 {REF} {Length: 4229} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=103.9]; Ion transport protein [PF00520.33, score=56.3]; Ion channel [PF07885.18, score=55.6]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}

Mlig455_035898 {REF} {Length: 4325} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=574, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=595, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=583, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=621, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}