Data search
Results for MligTC455_34457
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34457 | 2530 | 52.71 | Mlig455_065777 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.530 Region-enriched R4: 1.166/0.00263 |
Mlig455_065777 {REF} {Length: 682} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23532} {RNA1310_48777} {RNA815_25158} |
Cumulative graph for MligTC455_34457
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.349 | 5.899 | 0.03697 | 0.47271 | |
| RegionR2 | -0.137 | 5.899 | 0.67412 | 1.00000 | |
| RegionR3 | 0.32 | 5.899 | 0.23751 | 0.77899 | |
| RegionR4 | 1.166 | 5.899 | 0.00018 | 0.00263 | |
| RegionR5 | 0.441 | 5.899 | 0.09049 | 0.28498 | |
| RegionR6 | 0.385 | 5.899 | 0.16161 | 0.71456 | |
| RegionR7 | 0.018 | 5.899 | 0.95239 | 1.00000 | |
| RegionR8 | -0.845 | 5.899 | 0.02872 | 0.33176 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.915 | 5.899 | 0.37664 | 1.00000 | |
| RegenerationR2 | -0.283 | 5.899 | 0.36041 | 0.78903 | |
| RegenerationR3 | -0.251 | 5.899 | 0.44064 | 0.82749 | |
| RegenerationR4 | -0.429 | 5.899 | 0.20218 | 0.64842 | |
| RegenerationR5 | -0.237 | 5.899 | 0.45517 | 0.83326 | |
| RegenerationR6 | -0.43 | 5.899 | 0.19681 | 0.53669 | |
| RegenerationBL | -0.855 | 5.899 | 0.01957 | 0.15096 | |
| RegenerationTP | 0.009 | 5.899 | 0.98008 | 1.00000 |
Genes with expression patterns similar to MligTC455_34457
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34457 | 2530 | 52.71 | Mlig455_065777 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.530 Region-enriched R4: 1.166/0.00263 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065777 {REF} {Length: 682} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23532} {RNA1310_48777} {RNA815_25158} | |
| 2. | MligTC455_36840 | 3417 | 71.19 | Mlig455_029986 | Neo: - |
FAM49B | 1.791 | - | - | 0.841 | - | - | 0.950 | Mlig455_029986 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: CYRIA/CYRIB Rac1 binding domain [PF07159.14, score=325.6]; Yeast mitochondrial distribution and morphology (MDM) proteins [PF08118.13, score=17.6]} {Human: ENSG00000153310, FAM49B, family with sequence similarity 49 member B, [RH, Score=278, Expect=5e-92]; ENSG00000197872, FAM49A, family with sequence similarity 49 member A, [RH, Score=267, Expect=1e-87]} {Mouse: ENSMUSG00000022378, Fam49b, family with sequence similarity 49, member B, [RH, Score=278, Expect=4e-92]; ENSMUSG00000020589, Fam49a, family with sequence similarity 49, member A, [RH, Score=267, Expect=8e-88]} {Dmel: FBgn0052066, CG32066, [RH, Score=260, Expect=4e-85]} {Celegans: WBGene00019944, R07G3.8, [RH, Score=162, Expect=2e-47]} {Smed: dd_Smed_v6_1856_0_1, dd_Smed_v6_1856_0_1, [RH, Score=259, Expect=4e-85]} {RNA1509_28818, RNA1509_3232, RNA1509_42256, RNA1509_4269} {RNA1310_3063, RNA1509_28818, RNA1509_3232, RNA1509_42256, RNA1509_4269} {RNA1509_28818, RNA1509_3232, RNA1509_42256, RNA1509_4269, RNA815_4644} |
| 3. | MligTC455_16212 | 592 | 12.33 | Mlig455_016252 | Neo: - Age: - |
PIK3C2B | 0.96 | - | - | - | - | - | 0.960 | Mlig455_016252 {REF} {Length: 6999} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=138.3]; Phosphoinositide 3-kinase C2 [PF00792.26, score=61.3]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=60.8]; PI3-kinase family, ras-binding domain [PF00794.20, score=23.9]; Domain of unknown function (DUF4135) [PF13575.8, score=20.4]} {Human: ENSG00000133056, PIK3C2B, phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, [RH, Score=365, Expect=1e-102]; ENSG00000011405, PIK3C2A, phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, [RH, Score=358, Expect=2e-100]} {Mouse: ENSMUSG00000030660, Pik3c2a, phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, [RH, Score=380, Expect=2e-107]; ENSMUSG00000026447, Pik3c2b, phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, [RH, Score=371, Expect=7e-105]} {Dmel: FBgn0015278, Pi3K68D, Phosphotidylinositol 3 kinase 68D, [RH, Score=335, Expect=6e-93]} {Celegans: WBGene00009552, piki-1, Phosphatidylinositol 3-kinase piki-1, [RH, Score=285, Expect=1e-77]} {Smed: dd_Smed_v6_7725_0_1, dd_Smed_v6_7725_0_1, [RH, Score=308, Expect=4e-85]} {RNA1509_33440, RNA1509_6084} {RNA1310_1484.2, RNA1509_33440} {RNA1509_33440, RNA815_806} |
| 4. | MligTC455_45690 | 2497 | 52.02 | Mlig455_051204 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.586 Region-enriched R7: 1.072/0.04886 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_051204 {REF} {Length: 1686} {RNA1509_29397} {RNA1310_21586, RNA1509_29397} {RNA1509_29397, RNA815_10734.1} | |
| 5. | MligTC455_36146 | 388 | 8.09 | Mlig455_034256 | Neo: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_034256 {REF} {Length: 3287} {RNA1509_54264} {RNA1310_5666.1} {RNA815_1552} | |
| 6. | MligTC455_36147 | 389 | 8.1 | Mlig455_034292 | Neo: - Age: Down-Down-Up |
0.955 | - | - | - | - | - | 0.955 | Mlig455_034292 {REF} {Length: 3165} {RNA1509_54264} {RNA1310_5666.1} {RNA815_1552} | |
| 7. | MligTC455_37052 | 697 | 14.51 | Mlig455_036590 | Neo: - Age: Down-Up-Down |
ACBD3 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_036590 {REF} {Length: 3151} {Pfam: Golgi-dynamics membrane-trafficking [PF13897.8, score=217.5]; Acyl CoA binding protein [PF00887.21, score=44.8]} {Human: ENSG00000182827, ACBD3, acyl-CoA binding domain containing 3, [Score=203, Expect=6e-58]} {Mouse: ENSMUSG00000026499, Acbd3, acyl-Coenzyme A binding domain containing 3, [Score=201, Expect=2e-57]} {Dmel: FBgn0031061, CG14232, [Score=171, Expect=6e-47]} {Celegans: WBGene00012765, Y41E3.7, [Score=207, Expect=9e-62]} {Smed: dd_Smed_v6_2498_0_1, dd_Smed_v6_2498_0_1, [Score=196, Expect=4e-58]} {RNA1509_15486} {RNA1310_18462.1} {RNA815_2205.2} |
| 8. | MligTC455_40620 | 3703 | 77.15 | Mlig455_034547, Mlig455_064817 | Neo: - Age: logFC(26M/2M)=0.348 Region-enriched R3: 1.638/0.00022 |
SGPL1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_034547 {REF} {Length: 1975} {Pfam: Pyridoxal-dependent decarboxylase conserved domain [PF00282.21, score=71.4]; Aminotransferase class-V [PF00266.21, score=28.0]} {Human: ENSG00000166224, SGPL1, sphingosine-1-phosphate lyase 1, [Score=313, Expect=1e-99]} {Mouse: ENSMUSG00000020097, Sgpl1, sphingosine phosphate lyase 1, [Score=313, Expect=8e-100]} {Dmel: FBgn0010591, Sply, Sphingosine-1-phosphate lyase, [Score=286, Expect=9e-90]} {Celegans: WBGene00004981, spl-1, Sphingosine-1-phosphate lyase, [Score=283, Expect=2e-88]} {Smed: dd_Smed_v6_4459_0_1, dd_Smed_v6_4459_0_1, [Score=301, Expect=2e-95]} {RNA1509_16302} {RNA1310_14912} {RNA815_7513} Mlig455_064817 {REF} {Length: 3062} {Pfam: Pyridoxal-dependent decarboxylase conserved domain [PF00282.21, score=73.9]; Aminotransferase class-V [PF00266.21, score=28.0]} {Human: ENSG00000166224, SGPL1, sphingosine-1-phosphate lyase 1, [Score=316, Expect=1e-100]} {Mouse: ENSMUSG00000020097, Sgpl1, sphingosine phosphate lyase 1, [Score=315, Expect=2e-100]} {Dmel: FBgn0010591, Sply, Sphingosine-1-phosphate lyase, [Score=283, Expect=1e-88]} {Celegans: WBGene00004981, spl-1, Sphingosine-1-phosphate lyase, [Score=286, Expect=1e-89]} {Smed: dd_Smed_v6_4459_0_1, dd_Smed_v6_4459_0_1, [Score=301, Expect=1e-95]} {RNA1509_12635, RNA1509_16302} {RNA1310_14912, RNA1509_12635, RNA1509_16302} {RNA1509_12635, RNA1509_16302, RNA815_7513} |
Berezikov Lab - 2020-2021 © ERIBA