TomoSeq data search

Data search

Results for MligTC455_34479

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34479	75	1.55	Mlig455_019658, Mlig455_048059	Neo: - Age: logFC(26M/2M)=0.455 Regeneration-upregulated R4: 5.736 Regeneration-enriched R4: 5.736	SCP2	Mlig455_019658 {REF} {Length: 1616} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=90.8]; Thiolase, N-terminal domain [PF00108.25, score=81.5]; Thiolase, C-terminal domain [PF02803.20, score=38.2]; Alkyl sulfatase C-terminal [PF14864.8, score=22.3]; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III [PF08545.12, score=22.1]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=18.4]; Stage V sporulation protein AD (SpoVAD) [PF07451.13, score=17.4]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [RH, Score=708, Expect=0.0]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [RH, Score=700, Expect=0.0]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [RH, Score=468, Expect=4e-162]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [RH, Score=530, Expect=0.0]} {RNA1509_1168} {RNA1310_9798} {RNA815_4004} Mlig455_048059 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=90.6]; Thiolase, C-terminal domain [PF02803.20, score=38.2]; Alkyl sulfatase C-terminal [PF14864.8, score=22.1]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [Score=516, Expect=3e-179]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [Score=535, Expect=0.0]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [Score=523, Expect=0.0]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [Score=337, Expect=3e-110]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [Score=379, Expect=3e-127]} {RNA1509_1168} {RNA1310_9798} {RNA815_4004}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34479

1.55

Mlig455_019658, Mlig455_048059

Neo: -

Age: logFC(26M/2M)=0.455

Regeneration-upregulated R4: 5.736

Regeneration-enriched R4: 5.736

SCP2

Mlig455_019658 {REF} {Length: 1616} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=90.8]; Thiolase, N-terminal domain [PF00108.25, score=81.5]; Thiolase, C-terminal domain [PF02803.20, score=38.2]; Alkyl sulfatase C-terminal [PF14864.8, score=22.3]; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III [PF08545.12, score=22.1]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=18.4]; Stage V sporulation protein AD (SpoVAD) [PF07451.13, score=17.4]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [RH, Score=708, Expect=0.0]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [RH, Score=700, Expect=0.0]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [RH, Score=468, Expect=4e-162]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [RH, Score=530, Expect=0.0]} {RNA1509_1168} {RNA1310_9798} {RNA815_4004}

Mlig455_048059 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=90.6]; Thiolase, C-terminal domain [PF02803.20, score=38.2]; Alkyl sulfatase C-terminal [PF14864.8, score=22.1]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [Score=516, Expect=3e-179]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [Score=535, Expect=0.0]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [Score=523, Expect=0.0]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [Score=337, Expect=3e-110]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [Score=379, Expect=3e-127]} {RNA1509_1168} {RNA1310_9798} {RNA815_4004}

Cumulative graph for MligTC455_34479

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.429	1.525	0.99998	1.00000
RegionR2	0.318	1.525	1.00000	1.00000
RegionR3	-0.189	1.525	0.99997	1.00000
RegionR4	-0.213	1.525	0.99994	1.00000
RegionR5	-0.322	1.525	0.99994	1.00000
RegionR6	-0.109	1.525	1.00000	1.00000
RegionR7	0.064	1.525	0.99999	1.00000
RegionR8	0.022	1.525	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.841	1.525	0.26694	0.97039
RegenerationR2	4.295	1.525	0.00157	0.06054
RegenerationR3	6.128	1.525	0.00009	0.01033
RegenerationR4	5.736	1.525	0.00008	0.00609	Specific for R4: 5.736
RegenerationR5	5.243	1.525	0.00011	0.01394
RegenerationR6	5.628	1.525	0.00093	0.03314
RegenerationBL	5.664	1.525	0.00191	0.03513
RegenerationTP	6.045	1.525	0.00530	0.12201

Genes with expression patterns similar to MligTC455_34479

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34479	75	1.55	Mlig455_019658, Mlig455_048059	Neo: - Age: logFC(26M/2M)=0.455 Regeneration-upregulated R4: 5.736 Regeneration-enriched R4: 5.736	SCP2	3	-	-	-	1.000	1.000	1.000	Mlig455_019658 {REF} {Length: 1616} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=90.8]; Thiolase, N-terminal domain [PF00108.25, score=81.5]; Thiolase, C-terminal domain [PF02803.20, score=38.2]; Alkyl sulfatase C-terminal [PF14864.8, score=22.3]; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III [PF08545.12, score=22.1]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=18.4]; Stage V sporulation protein AD (SpoVAD) [PF07451.13, score=17.4]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [RH, Score=681, Expect=0.0]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [RH, Score=708, Expect=0.0]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [RH, Score=700, Expect=0.0]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [RH, Score=468, Expect=4e-162]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [RH, Score=530, Expect=0.0]} {RNA1509_1168} {RNA1310_9798} {RNA815_4004} Mlig455_048059 {REF} {Length: 1971} {TRANSSPLICED} {Pfam: SCP-2 sterol transfer family [PF02036.19, score=90.6]; Thiolase, C-terminal domain [PF02803.20, score=38.2]; Alkyl sulfatase C-terminal [PF14864.8, score=22.1]} {Human: ENSG00000116171, SCP2, sterol carrier protein 2, [Score=516, Expect=3e-179]} {Mouse: ENSMUSG00000028603, Scp2, sterol carrier protein 2, liver, [Score=535, Expect=0.0]} {Dmel: FBgn0015808, ScpX, Sterol carrier protein X-related thiolase, [Score=523, Expect=0.0]} {Celegans: WBGene00013284, daf-22, Non-specific lipid-transfer protein-like 2, [Score=337, Expect=3e-110]} {Smed: dd_Smed_v6_2892_0_1, dd_Smed_v6_2892_0_1, [Score=379, Expect=3e-127]} {RNA1509_1168} {RNA1310_9798} {RNA815_4004}
2.	MligTC455_24689	8524	177.58	Mlig455_016799	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.356	RPL36	0.965	-	-	-	-	0.965	-	Mlig455_016799 {REF} {Length: 445} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=137.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=122, Expect=4e-37]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=122, Expect=2e-37]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=104, Expect=2e-30]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=100, Expect=9e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=109, Expect=8e-33]} {RNA1509_12861, RNA1509_31706} {RNA1310_78482.2, RNA1509_12861, RNA1509_31706} {RNA1509_12861, RNA1509_31706, RNA815_39095}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_34479

1.55

Mlig455_019658, Mlig455_048059

Neo: -

Age: logFC(26M/2M)=0.455

Regeneration-upregulated R4: 5.736

Regeneration-enriched R4: 5.736

SCP2

1.000

MligTC455_24689

8524

177.58

Mlig455_016799

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.356

RPL36

0.965

Mlig455_016799 {REF} {Length: 445} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=137.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=122, Expect=4e-37]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=122, Expect=2e-37]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=104, Expect=2e-30]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=100, Expect=9e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=109, Expect=8e-33]} {RNA1509_12861, RNA1509_31706} {RNA1310_78482.2, RNA1509_12861, RNA1509_31706} {RNA1509_12861, RNA1509_31706, RNA815_39095}