TomoSeq data search

Data search

Results for MligTC455_34489

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34489	31	0.65	Mlig455_039131, Mlig455_039209	Neo: - Age: -	DAG1	Mlig455_039131 {REF} {Length: 4598} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=49.2]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=30.5]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=62.0, Expect=7e-09]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=1e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=79.0, Expect=1e-14]} {RNA1509_23963, RNA1509_49302} {RNA1310_1596.1, RNA1509_23963, RNA1509_49302} {RNA1509_23963, RNA1509_49302, RNA815_7113} Mlig455_039209 {REF} {Length: 2385} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=38.5]} {Smed: dd_Smed_v6_13741_0_2, dd_Smed_v6_13741_0_2, [Score=50.1, Expect=7e-07]} {RNA1509_49302} {RNA1310_1596.1} {RNA815_7113}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34489

0.65

Mlig455_039131, Mlig455_039209

Neo: -

Age: -

DAG1

Mlig455_039131 {REF} {Length: 4598} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=49.2]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=30.5]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=62.0, Expect=7e-09]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=1e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=79.0, Expect=1e-14]} {RNA1509_23963, RNA1509_49302} {RNA1310_1596.1, RNA1509_23963, RNA1509_49302} {RNA1509_23963, RNA1509_49302, RNA815_7113}

Mlig455_039209 {REF} {Length: 2385} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=38.5]} {Smed: dd_Smed_v6_13741_0_2, dd_Smed_v6_13741_0_2, [Score=50.1, Expect=7e-07]} {RNA1509_49302} {RNA1310_1596.1} {RNA815_7113}

Cumulative graph for MligTC455_34489

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.152	0.712	0.99947	1.00000
RegionR2	-0.831	0.712	0.99167	1.00000
RegionR3	0.54	0.712	0.88665	1.00000
RegionR4	2.866	0.712	0.21224	0.49759
RegionR5	1.556	0.712	0.25372	0.57109
RegionR6	-1.479	0.712	0.99986	1.00000
RegionR7	1.981	0.712	0.28237	0.91571
RegionR8	-1.481	0.712	0.99941	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.037	0.712	0.99973	1.00000
RegenerationR2	-3.029	0.712	0.29126	0.73418
RegenerationR3	-1.218	0.712	0.73092	0.95816
RegenerationR4	-3.134	0.712	0.16124	0.59418
RegenerationR5	-0.402	0.712	0.68006	0.94415
RegenerationR6	-1.576	0.712	0.99974	1.00000
RegenerationBL	1.062	0.712	0.55472	0.91078
RegenerationTP	-0.511	0.712	0.98099	1.00000

Genes with expression patterns similar to MligTC455_34489

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34489	31	0.65	Mlig455_039131, Mlig455_039209	Neo: - Age: -	DAG1	2	-	-	1.000	-	-	1.000	Mlig455_039131 {REF} {Length: 4598} {TRANSSPLICED} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=49.2]; Alpha-Dystroglycan N-terminal domain 2 [PF18424.3, score=30.5]} {Human: ENSG00000173402, DAG1, dystroglycan 1, [RH, Score=62.0, Expect=7e-09]} {Mouse: ENSMUSG00000039952, Dag1, dystroglycan 1, [RH, Score=63.5, Expect=1e-09]} {Smed: dd_Smed_v6_11814_0_1, dd_Smed_v6_11814_0_1, [RH, Score=79.0, Expect=1e-14]} {RNA1509_23963, RNA1509_49302} {RNA1310_1596.1, RNA1509_23963, RNA1509_49302} {RNA1509_23963, RNA1509_49302, RNA815_7113} Mlig455_039209 {REF} {Length: 2385} {Pfam: Dystroglycan (Dystrophin-associated glycoprotein 1) [PF05454.13, score=38.5]} {Smed: dd_Smed_v6_13741_0_2, dd_Smed_v6_13741_0_2, [Score=50.1, Expect=7e-07]} {RNA1509_49302} {RNA1310_1596.1} {RNA815_7113}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts