Data search
Results for MligTC455_34504
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34504 | 628 | 13.08 | Mlig455_007759 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.254 |
SLBP | Mlig455_007759 {REF} {Length: 3742} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=87.4, Expect=1e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=85.9, Expect=3e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=1e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=2e-24]} {RNA1509_42724, RNA1509_45661, RNA1509_50024} {RNA1310_22526.2, RNA1509_42724, RNA1509_45661, RNA1509_50024} {RNA1509_42724, RNA1509_45661, RNA1509_50024, RNA815_16079} |
Cumulative graph for MligTC455_34504
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.293 | 4.07 | 0.79153 | 1.00000 | |
| RegionR2 | -0.971 | 4.07 | 0.04795 | 0.25995 | |
| RegionR3 | -0.486 | 4.07 | 0.21807 | 0.75921 | |
| RegionR4 | 0.246 | 4.07 | 0.53970 | 0.86223 | |
| RegionR5 | 0.989 | 4.07 | 0.00116 | 0.01146 | |
| RegionR6 | 0.536 | 4.07 | 0.13421 | 0.65849 | |
| RegionR7 | 0.03 | 4.07 | 0.95391 | 1.00000 | |
| RegionR8 | -0.05 | 4.07 | 0.94361 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.901 | 4.07 | 0.10732 | 0.82937 | |
| RegenerationR2 | 0.233 | 4.07 | 0.57538 | 0.90464 | |
| RegenerationR3 | 0.253 | 4.07 | 0.54750 | 0.88228 | |
| RegenerationR4 | 0.186 | 4.07 | 0.62376 | 0.92188 | |
| RegenerationR5 | 0.048 | 4.07 | 0.88175 | 1.00000 | |
| RegenerationR6 | 0.721 | 4.07 | 0.05153 | 0.28431 | |
| RegenerationBL | -0.538 | 4.07 | 0.34034 | 0.70708 | |
| RegenerationTP | 0.976 | 4.07 | 0.06146 | 0.40143 |
Genes with expression patterns similar to MligTC455_34504
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34504 | 628 | 13.08 | Mlig455_007759 | Neo: Int S/G2/M Age: logFC(26M/2M)=-0.254 |
SLBP | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007759 {REF} {Length: 3742} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=87.4, Expect=1e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=85.9, Expect=3e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=1e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=2e-24]} {RNA1509_42724, RNA1509_45661, RNA1509_50024} {RNA1310_22526.2, RNA1509_42724, RNA1509_45661, RNA1509_50024} {RNA1509_42724, RNA1509_45661, RNA1509_50024, RNA815_16079} |
| 2. | MligTC455_23235 | 6858 | 142.88 | Mlig455_007211 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.137/0.00000 |
TMEM258 | 1.815 | - | - | 0.960 | - | - | 0.855 | Mlig455_007211 {REF} {Length: 3602} {Pfam: Oligosaccharyltransferase subunit 5 [PF05251.14, score=99.4]; Family of unknown function (DUF6512) [PF20122.1, score=23.2]; LydA holin phage, holin superfamily III [PF16083.7, score=20.7]} {Human: ENSG00000134825, TMEM258, transmembrane protein 258, [RH, Score=131, Expect=1e-41]} {Mouse: ENSMUSG00000036372, Tmem258, transmembrane protein 258, [RH, Score=131, Expect=9e-42]} {Dmel: FBgn0036667, CG9669, [RH, Score=97.1, Expect=3e-28]} {Celegans: WBGene00021960, Y57E12AM.1, Transmembrane protein 258 homolog, [RH, Score=77.8, Expect=1e-20]} {Smed: dd_Smed_v6_1016_0_1, dd_Smed_v6_1016_0_1, [RH, Score=134, Expect=6e-43]} {RNA1509_5135} {RNA1310_34300, RNA1509_5135} {RNA1509_5135, RNA815_23193} |
| 3. | MligTC455_24675 | 396 | 8.24 | Mlig455_062077 | Neo: Int S/G2/M Age: - |
NUP85 | 1.775 | - | 0.807 | - | 0.968 | - | - | Mlig455_062077 {REF} {Length: 3043} {Pfam: Nup85 Nucleoporin [PF07575.15, score=248.0]} {Human: ENSG00000125450, NUP85, nucleoporin 85, [Score=211, Expect=1e-61]} {Mouse: ENSMUSG00000020739, Nup85, nucleoporin 85, [Score=207, Expect=4e-60]} {Dmel: FBgn0034310, Nup75, Nucleoporin 75kD, [Score=166, Expect=3e-45]} {Smed: dd_Smed_v6_6403_0_1, dd_Smed_v6_6403_0_1, [Score=124, Expect=2e-30]} {RNA1509_16274, RNA1509_49609} {RNA1310_10738, RNA1509_49609} {RNA1509_49609, RNA815_23975} |
| 4. | MligTC455_16596 | 157 | 3.28 | Mlig455_065294 | Neo: - Age: - |
SLC26A3 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_065294 {REF} {Length: 4967} {Pfam: Sulfate permease family [PF00916.22, score=330.5]; STAS domain [PF01740.23, score=83.3]} {Human: ENSG00000091138, SLC26A3, solute carrier family 26 member 3, [RH, Score=365, Expect=5e-113]} {Mouse: ENSMUSG00000020651, Slc26a4, solute carrier family 26, member 4, [Score=358, Expect=4e-110]; ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=358, Expect=1e-110]; ENSMUSG00000107138, Slc26a6, solute carrier family 26, member 6, [Score=341, Expect=1e-105]; ENSMUSG00000023259, Slc26a6, solute carrier family 26, member 6, [Score=341, Expect=1e-105]} {Dmel: FBgn0036770, Prestin, [Score=282, Expect=1e-82]} {Celegans: WBGene00013963, sulp-8, Anion transporter SULP-8a; Anion transporter SULP-8b; SULfate Permease family, [Score=285, Expect=4e-85]} {Smed: dd_Smed_v6_8150_0_1, dd_Smed_v6_8150_0_1, [RH, Score=624, Expect=0.0]} {RNA1509_13299} {RNA1310_2464.1} {RNA815_2661} |
| 5. | MligTC455_32701 | 431 | 8.99 | Mlig455_038180 | Neo: - Age: Up-Down-Up |
0.959 | - | - | - | 0.959 | - | - | Mlig455_038180 {REF} {Length: 2560} {Pfam: Immunoglobulin domain [PF13927.8, score=35.0]; Immunoglobulin domain [PF00047.27, score=30.3]; Immunoglobulin domain [PF13895.8, score=29.8]; Immunoglobulin V-set domain [PF07686.19, score=28.4]} {RNA1509_17145} {RNA1310_15467} {RNA815_2456.1} | |
| 6. | MligTC455_43061 | 215 | 4.47 | Mlig455_063586 | Neo: - Age: logFC(26M/2M)=0.487 |
GGT1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_063586 {REF} {Length: 3587} {Pfam: Gamma-glutamyltranspeptidase [PF01019.23, score=302.1]} {Human: ENSG00000100031, GGT1, gamma-glutamyltransferase 1, [Score=234, Expect=1e-71]} {Mouse: ENSMUSG00000006345, Ggt1, gamma-glutamyltransferase 1, [Score=226, Expect=6e-68]} {Dmel: FBgn0030796, CG4829, [Score=204, Expect=8e-59]} {Celegans: WBGene00011393, T03D8.6, [Score=205, Expect=6e-60]} {Smed: dd_Smed_v6_4591_0_3, dd_Smed_v6_4591_0_3, [Score=254, Expect=4e-80]} {RNA1509_44409} {RNA1310_26208} {RNA815_8830} |
Berezikov Lab - 2020-2021 © ERIBA