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Results for MligTC455_34597

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34597 662 13.78 Mlig455_038364

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.488

 DDX4 Mlig455_038364 {REF} {Length: 4689} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=152.7]; Helicase conserved C-terminal domain [PF00271.33, score=92.6]; Zinc knuckle [PF00098.25, score=49.9]; Zinc knuckle [PF13696.8, score=27.6]; Type III restriction enzyme, res subunit [PF04851.17, score=25.4]; Zinc knuckle [PF13917.8, score=18.8]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=382, Expect=2e-119]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=377, Expect=2e-117]} {Dmel: FBgn0283442, vas, vasa, [Score=364, Expect=2e-113]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [RH, Score=365, Expect=9e-111]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [RH, Score=404, Expect=7e-126]} {RNA1509_51291} {RNA1310_5204.1} {RNA815_10854}

Cumulative graph for MligTC455_34597

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.09 3.969 0.92559 1.00000
RegionR2 -0.581 3.969 0.24410 0.62062
RegionR3 0.409 3.969 0.27648 0.82038
RegionR4 0.699 3.969 0.10356 0.31460
RegionR5 0.195 3.969 0.58358 0.94186
RegionR6 0.23 3.969 0.56621 1.00000
RegionR7 -0.588 3.969 0.27824 0.91035
RegionR8 -0.453 3.969 0.47938 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.233 3.969 0.43453 1.00000
RegenerationR2 0.387 3.969 0.37292 0.79739
RegenerationR3 0.104 3.969 0.81227 0.98567
RegenerationR4 -0.038 3.969 0.93186 1.00000
RegenerationR5 0.331 3.969 0.42265 0.81300
RegenerationR6 0.332 3.969 0.46198 0.77939
RegenerationBL 0.237 3.969 0.66941 1.00000
RegenerationTP -0.554 3.969 0.42172 0.84590


Genes with expression patterns similar to MligTC455_34597

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34597 662 13.78 Mlig455_038364

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.488

 DDX4 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_038364 {REF} {Length: 4689} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=152.7]; Helicase conserved C-terminal domain [PF00271.33, score=92.6]; Zinc knuckle [PF00098.25, score=49.9]; Zinc knuckle [PF13696.8, score=27.6]; Type III restriction enzyme, res subunit [PF04851.17, score=25.4]; Zinc knuckle [PF13917.8, score=18.8]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=382, Expect=2e-119]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=377, Expect=2e-117]} {Dmel: FBgn0283442, vas, vasa, [Score=364, Expect=2e-113]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [RH, Score=365, Expect=9e-111]} {Smed: dd_Smed_v6_1985_0_1, dd_Smed_v6_1985_0_1, [RH, Score=404, Expect=7e-126]} {RNA1509_51291} {RNA1310_5204.1} {RNA815_10854}
2. MligTC455_34599 360 7.51 Mlig455_068284

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.808

 DDX4 3.641 0.999 0.990 - 0.846 0.806 - Mlig455_068284 {REF} {Length: 3678} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=136.9]; Zinc knuckle [PF00098.25, score=57.3]; Zinc knuckle [PF13696.8, score=28.9]; Helicase conserved C-terminal domain [PF00271.33, score=25.7]; Type III restriction enzyme, res subunit [PF04851.17, score=21.8]; Zinc knuckle [PF13917.8, score=19.9]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=263, Expect=4e-78]; ENSG00000215301, DDX3X, DEAD-box helicase 3 X-linked, [Score=253, Expect=1e-74]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=258, Expect=3e-76]; ENSMUSG00000069045, Ddx3y, DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked, [Score=254, Expect=2e-75]; ENSMUSG00000039224, D1Pas1, DNA segment, Chr 1, Pasteur Institute 1, [Score=252, Expect=1e-74]; ENSMUSG00000000787, Ddx3x, DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked, [Score=250, Expect=8e-74]} {Dmel: FBgn0263231, bel, belle, [Score=271, Expect=1e-80]} {Celegans: WBGene00001599, glh-2, ATP-dependent RNA helicase glh-2, [Score=265, Expect=2e-77]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=284, Expect=4e-85]} {RNA1509_8356} {RNA1310_5204.1} {RNA815_10854}
3. MligTC455_34596 416 8.66 Mlig455_038338

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.538/0.00919

 DDX4 2.76 0.995 0.976 - 0.789 - - Mlig455_038338 {REF} {Length: 4786} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=155.3]; Helicase conserved C-terminal domain [PF00271.33, score=94.3]; Type III restriction enzyme, res subunit [PF04851.17, score=28.3]} {Human: ENSG00000152670, DDX4, DEAD-box helicase 4, [Score=346, Expect=2e-113]} {Mouse: ENSMUSG00000021758, Ddx4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4, [Score=340, Expect=4e-110]} {Dmel: FBgn0283442, vas, vasa, [Score=338, Expect=9e-110]} {Celegans: WBGene00001598, glh-1, ATP-dependent RNA helicase glh-1, [Score=301, Expect=1e-94]} {Smed: dd_Smed_v6_1985_0_2, dd_Smed_v6_1985_0_2, [Score=353, Expect=2e-113]} {RNA1509_22999, RNA1509_39858, RNA1509_44380, RNA1509_51291} {RNA1310_5204.1, RNA1509_22999, RNA1509_39858, RNA1509_44380} {RNA1509_22999, RNA1509_39858, RNA1509_44380, RNA815_10854}
4. MligTC455_47580 1441 30.01 Mlig455_023584

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.781

Region-specific R5: 2.414

Region-enriched R5: 2.374/0.00000

 C19orf12 0.968 - - - 0.968 - - Mlig455_023584 {REF} {Length: 651} {TRANSSPLICED} {Human: ENSG00000131943, C19orf12, chromosome 19 open reading frame 12, [Score=70.1, Expect=2e-15]} {Mouse: ENSMUSG00000054676, 1600014C10Rik, RIKEN cDNA 1600014C10 gene, [Score=80.9, Expect=6e-20]} {Dmel: FBgn0023530, CG3740, [Score=69.3, Expect=1e-15]} {RNA1509_54973} {RNA1310_48313.3} {RNA815_24031}
5. MligTC455_42177 1954 40.71 Mlig455_065113, Mlig455_065124

Neo: -

Age: -

 0.952 - - - 0.952 - -

Mlig455_065113 {REF} {Length: 1592} {TRANSSPLICED} {RNA1509_29642, RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637} {RNA1310_23241.1, RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637} {RNA1509_29813, RNA1509_43463, RNA1509_4456, RNA1509_47637, RNA815_15481.1}

Mlig455_065124 {REF} {Length: 2233} {TRANSSPLICED} {RNA1509_20191, RNA1509_29642, RNA1509_40909} {RNA1310_23241.1, RNA1509_20191, RNA1509_29642, RNA1509_40909} {RNA1509_20191, RNA1509_29642, RNA1509_40909, RNA815_15481.1}

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