TomoSeq data search

Data search

Results for MligTC455_34638

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34638

4615

96.15

Mlig455_043935

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.744

Mlig455_043935 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_6670} {RNA1310_26665} {RNA815_13199}

Cumulative graph for MligTC455_34638

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.035	6.68	0.93880	1.00000
RegionR2	-0.288	6.68	0.23081	0.60318
RegionR3	-0.222	6.68	0.27279	0.81725
RegionR4	0.689	6.68	0.00276	0.02294
RegionR5	0.197	6.68	0.29649	0.63056
RegionR6	-0.037	6.68	0.85594	1.00000
RegionR7	-0.006	6.68	0.97989	1.00000
RegionR8	-0.369	6.68	0.21598	0.82055

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.404	6.68	0.04906	0.69564
RegenerationR2	0.278	6.68	0.21910	0.66679
RegenerationR3	0.257	6.68	0.28949	0.72141
RegenerationR4	-0.277	6.68	0.25619	0.70428
RegenerationR5	0.197	6.68	0.39497	0.79493
RegenerationR6	0.153	6.68	0.52918	0.82621
RegenerationBL	0.46	6.68	0.05582	0.27367
RegenerationTP	-0.126	6.68	0.65156	0.98962

Genes with expression patterns similar to MligTC455_34638

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34638	4615	96.15	Mlig455_043935	Neo: - Age: Up-Up-Down, logFC(26M/2M)=0.744		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043935 {REF} {Length: 983} {NoTransDecoderORF} {RNA1509_6670} {RNA1310_26665} {RNA815_13199}
2.	MligTC455_34637	4770	99.38	Mlig455_043930	Neo: - Age: -	ATP2A1	5.943	1.000	0.999	0.961	0.997	0.998	0.988	Mlig455_043930 {REF} {Length: 4855} {TRANSSPLICED} {Pfam: E1-E2 ATPase [PF00122.22, score=187.2]; Cation transporting ATPase, C-terminus [PF00689.23, score=155.5]; Cation transport ATPase (P-type) [PF13246.8, score=75.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=74.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=70.1]; haloacid dehalogenase-like hydrolase [PF12710.9, score=31.9]; haloacid dehalogenase-like hydrolase [PF08282.14, score=31.4]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1417, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1403, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1355, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1413, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1405, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1367, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1469, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1437, Expect=0.0]} {Smed: dd_Smed_v6_9529_0_1, dd_Smed_v6_9529_0_1, [RH, Score=1505, Expect=0.0]} {RNA1509_2878, RNA1509_38831, RNA1509_52212, RNA1509_52423, RNA1509_57132, RNA1509_593, RNA1509_6670} {RNA1310_3909.1, RNA1509_2878, RNA1509_38831, RNA1509_52212, RNA1509_52423, RNA1509_57132, RNA1509_593, RNA1509_6670} {RNA1509_2878, RNA1509_38831, RNA1509_52212, RNA1509_52423, RNA1509_57132, RNA1509_593, RNA1509_6670, RNA815_955.1}
3.	MligTC455_46488	778	16.2	Mlig455_067216	Neo: - Age: logFC(26M/2M)=0.275	NSF	0.959	-	-	-	-	0.959	-	Mlig455_067216 {REF} {Length: 3216} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=173.9]; AAA+ lid domain [PF17862.3, score=40.3]; AAA ATPase domain [PF13191.8, score=36.7]; AAA domain [PF13401.8, score=36.2]; TIP49 P-loop domain [PF06068.15, score=31.5]; AAA domain [PF13238.8, score=30.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.2]; NACHT domain [PF05729.14, score=28.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=28.3]; AAA domain [PF13671.8, score=27.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=27.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=24.1]; AAA domain [PF13173.8, score=22.8]; RNA helicase [PF00910.24, score=22.5]; IstB-like ATP binding protein [PF01695.19, score=22.5]; Cell division protein 48 (CDC48), domain 2 [PF02933.19, score=22.2]; Cell division protein 48 (CDC48), N-terminal domain [PF02359.20, score=21.9]; ATPase domain predominantly from Archaea [PF01637.20, score=21.1]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=19.6]; AAA domain [PF13086.8, score=19.0]} {Human: ENSG00000276262, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=723, Expect=0.0]; ENSG00000073969, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=723, Expect=0.0]; ENSG00000278174, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=723, Expect=0.0]} {Mouse: ENSMUSG00000034187, Nsf, N-ethylmaleimide sensitive fusion protein, [RH, Score=724, Expect=0.0]} {Dmel: FBgn0266464, Nsf2, N-ethylmaleimide-sensitive factor 2, [Score=752, Expect=0.0]} {Celegans: WBGene00003818, nsf-1, Vesicle-fusing ATPase, [RH, Score=658, Expect=0.0]} {Smed: dd_Smed_v6_3364_0_1, dd_Smed_v6_3364_0_1, [Score=583, Expect=0.0]} {RNA1509_25873, RNA1509_31594, RNA1509_34048, RNA1509_58840} {RNA1310_9210, RNA1509_25873, RNA1509_31594, RNA1509_34048, RNA1509_58840} {RNA1509_25873, RNA1509_31594, RNA1509_34048, RNA1509_58840, RNA815_3152}
4.	MligTC455_24630	962	20.04	Mlig455_067759	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_067759 {REF} {Length: 5477} {Pfam: RhoGEF domain [PF00621.22, score=30.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=21.0]} {RNA1509_7176} {RNA1310_1343.1} {RNA815_2798}

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