Data search
Results for MligTC455_34673
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34673 | 1091 | 22.72 | Mlig455_033602, Mlig455_043368 | Neo: Int S/G2/M Age: - |
RARS | Mlig455_033602 {REF} {Length: 902} {Pfam: Methyltransferase domain [PF13383.8, score=43.2]; Methyltransferase FkbM domain [PF05050.14, score=23.2]} {Celegans: WBGene00019450, K06H6.2, [RH, Score=53.5, Expect=4e-08]} {Smed: dd_Smed_v6_3107_0_1, dd_Smed_v6_3107_0_1, [RH, Score=201, Expect=4e-63]} {RNA1509_50468} {RNA1310_40324} {RNA815_31800} Mlig455_043368 {REF} {Length: 2709} {TRANSSPLICED} {Pfam: tRNA synthetases class I (R) [PF00750.21, score=441.4]; DALR anticodon binding domain [PF05746.17, score=93.1]; Arginyl tRNA synthetase N terminal domain [PF03485.18, score=85.7]} {Human: ENSG00000113643, RARS, arginyl-tRNA synthetase, [RH, Score=760, Expect=0.0]} {Mouse: ENSMUSG00000018848, Rars, arginyl-tRNA synthetase, [RH, Score=758, Expect=0.0]} {Dmel: FBgn0027093, ArgRS, Arginyl-tRNA synthetase, [RH, Score=696, Expect=0.0]} {Celegans: WBGene00004679, rars-1, Probable arginine--tRNA ligase, cytoplasmic, [RH, Score=607, Expect=0.0]} {Smed: dd_Smed_v6_3682_0_1, dd_Smed_v6_3682_0_1, [RH, Score=703, Expect=0.0]} {RNA1509_3496, RNA1509_49285, RNA1509_53094} {RNA1310_5974.1, RNA1509_3496, RNA1509_49285, RNA1509_53094} {RNA1509_3496, RNA1509_49285, RNA1509_53094, RNA815_1406} |
Cumulative graph for MligTC455_34673
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.413 | 4.773 | 0.64336 | 1.00000 | |
| RegionR2 | 0.511 | 4.773 | 0.27438 | 0.65935 | |
| RegionR3 | 0.548 | 4.773 | 0.14000 | 0.63918 | |
| RegionR4 | -0.273 | 4.773 | 0.54192 | 0.86399 | |
| RegionR5 | 0.758 | 4.773 | 0.02040 | 0.09852 | |
| RegionR6 | 0.299 | 4.773 | 0.43912 | 0.99915 | |
| RegionR7 | -0.427 | 4.773 | 0.43613 | 1.00000 | |
| RegionR8 | -1.828 | 4.773 | 0.03780 | 0.38178 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.229 | 4.773 | 0.83268 | 1.00000 | |
| RegenerationR2 | -0.289 | 4.773 | 0.47037 | 0.85797 | |
| RegenerationR3 | -0.052 | 4.773 | 0.90090 | 1.00000 | |
| RegenerationR4 | 0.016 | 4.773 | 0.97145 | 1.00000 | |
| RegenerationR5 | -0.055 | 4.773 | 0.88588 | 1.00000 | |
| RegenerationR6 | 0.696 | 4.773 | 0.09487 | 0.38314 | |
| RegenerationBL | 1.385 | 4.773 | 0.00749 | 0.08444 | |
| RegenerationTP | 0.547 | 4.773 | 0.43938 | 0.85967 |
Genes with expression patterns similar to MligTC455_34673
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34673 | 1091 | 22.72 | Mlig455_033602, Mlig455_043368 | Neo: Int S/G2/M Age: - |
RARS | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033602 {REF} {Length: 902} {Pfam: Methyltransferase domain [PF13383.8, score=43.2]; Methyltransferase FkbM domain [PF05050.14, score=23.2]} {Celegans: WBGene00019450, K06H6.2, [RH, Score=53.5, Expect=4e-08]} {Smed: dd_Smed_v6_3107_0_1, dd_Smed_v6_3107_0_1, [RH, Score=201, Expect=4e-63]} {RNA1509_50468} {RNA1310_40324} {RNA815_31800} Mlig455_043368 {REF} {Length: 2709} {TRANSSPLICED} {Pfam: tRNA synthetases class I (R) [PF00750.21, score=441.4]; DALR anticodon binding domain [PF05746.17, score=93.1]; Arginyl tRNA synthetase N terminal domain [PF03485.18, score=85.7]} {Human: ENSG00000113643, RARS, arginyl-tRNA synthetase, [RH, Score=760, Expect=0.0]} {Mouse: ENSMUSG00000018848, Rars, arginyl-tRNA synthetase, [RH, Score=758, Expect=0.0]} {Dmel: FBgn0027093, ArgRS, Arginyl-tRNA synthetase, [RH, Score=696, Expect=0.0]} {Celegans: WBGene00004679, rars-1, Probable arginine--tRNA ligase, cytoplasmic, [RH, Score=607, Expect=0.0]} {Smed: dd_Smed_v6_3682_0_1, dd_Smed_v6_3682_0_1, [RH, Score=703, Expect=0.0]} {RNA1509_3496, RNA1509_49285, RNA1509_53094} {RNA1310_5974.1, RNA1509_3496, RNA1509_49285, RNA1509_53094} {RNA1509_3496, RNA1509_49285, RNA1509_53094, RNA815_1406} |
| 2. | MligTC455_23355 | 380 | 7.91 | Mlig455_047433 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.922/0.03999 Regeneration-upregulated BL: 4.169 Regeneration-enriched BL: 4.169 |
GEMIN5 | 1.75 | - | - | - | 0.776 | 0.974 | - | Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032} |
| 3. | MligTC455_22681 | 528 | 11.01 | Mlig455_025576 | Neo: - Age: Down-Down-Down |
FBXL8 | 1.713 | - | - | - | 0.757 | - | 0.956 | Mlig455_025576 {REF} {Length: 2321} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=24.9]; F-box domain [PF00646.35, score=21.8]} {Human: ENSG00000135722, FBXL8, F-box and leucine rich repeat protein 8, [RH, Score=89.0, Expect=7e-19]} {Mouse: ENSMUSG00000033313, Fbxl8, F-box and leucine-rich repeat protein 8, [RH, Score=109, Expect=5e-26]} {RNA1509_12536, RNA1509_38251} {RNA1310_7458.1, RNA1509_12536, RNA1509_38251} {RNA1509_12536, RNA1509_38251, RNA815_12183} |
| 4. | MligTC455_51151 | 2217 | 46.19 | Mlig455_020959 | Neo: - Age: - |
OAT | 0.962 | - | - | - | 0.962 | - | - | Mlig455_020959 {REF} {Length: 2051} {TRANSSPLICED} {Pfam: Aminotransferase class-III [PF00202.23, score=387.3]} {Human: ENSG00000065154, OAT, ornithine aminotransferase, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030934, Oat, ornithine aminotransferase, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0022774, Oat, Ornithine aminotransferase precursor, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00015814, oatr-1, Probable ornithine aminotransferase, mitochondrial, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_1896_0_1, dd_Smed_v6_1896_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_2337} {RNA1310_13076.1} {RNA815_4668} |
| 5. | MligTC455_47304 | 1465 | 30.53 | Mlig455_029684 | Neo: - Age: Down-Down-Up |
PNPO | 0.96 | - | - | - | 0.960 | - | - | Mlig455_029684 {REF} {Length: 1683} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=86.5]; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region [PF10590.11, score=67.1]; Pyridoxamine 5'-phosphate oxidase [PF12766.9, score=29.1]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [RH, Score=192, Expect=2e-60]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [RH, Score=191, Expect=4e-60]} {Dmel: FBgn0051472, sgll, sugarlethal, [RH, Score=184, Expect=9e-58]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=181, Expect=7e-57]} {Smed: dd_Smed_v6_5086_0_1, dd_Smed_v6_5086_0_1, [RH, Score=182, Expect=2e-57]} {RNA1509_19892, RNA1509_29007, RNA1509_3472} {RNA1310_16067, RNA1509_19892, RNA1509_29007, RNA1509_3472} {RNA1509_19892, RNA1509_29007, RNA1509_3472, RNA815_7134} |
| 6. | MligTC455_10654 | 656 | 13.67 | Mlig455_023899 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_023899 {REF} {Length: 66} {NoTransDecoderORF} {RNA1509_39691} {RNA1310_26638} {RNA815_23692} | |
| 7. | MligTC455_52500 | 1490 | 31.04 | Mlig455_033780 | Neo: - Age: - Region-enriched R5: 1.829/0.00370 |
GRHPR | 0.952 | - | - | - | 0.952 | - | - | Mlig455_033780 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=169.4]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=55.1]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=19.9]} {Human: ENSG00000137106, GRHPR, glyoxylate and hydroxypyruvate reductase, [Score=164, Expect=1e-47]} {Mouse: ENSMUSG00000035637, Grhpr, glyoxylate reductase/hydroxypyruvate reductase, [Score=156, Expect=1e-44]} {Dmel: FBgn0051674, CG31674, [Score=151, Expect=8e-43]} {Celegans: WBGene00007836, C31C9.2, [Score=102, Expect=8e-25]} {Smed: dd_Smed_v6_8767_0_1, dd_Smed_v6_8767_0_1, [Score=174, Expect=7e-52]} {RNA1509_6635} {RNA1310_17744} {RNA815_8969} |
| 8. | MligTC455_14390 | 65 | 1.36 | Mlig455_048900 | Neo: - Age: - |
0.951 | - | - | - | 0.951 | - | - | Mlig455_048900 {REF} {Length: 119} {NoTransDecoderORF} |
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