TomoSeq data search

Data search

Results for MligTC455_34731

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34731

105

2.18

Mlig455_056121

Neo: -

Age: Up-Up-Down

XDH

Mlig455_056121 {REF} {Length: 4336} {Pfam: [2Fe-2S] binding domain [PF01799.22, score=99.3]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=98.4]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=60.9]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=31.5]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=372, Expect=3e-115]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=376, Expect=1e-116]} {Dmel: FBgn0003308, ry, rosy, [Score=418, Expect=2e-132]} {Celegans: WBGene00010083, xhd-1, [Score=348, Expect=8e-107]} {RNA1310_2743} {RNA815_28439}

Cumulative graph for MligTC455_34731

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.178	2.181	0.28108	0.93205
RegionR2	-0.573	2.181	0.95530	1.00000
RegionR3	0.989	2.181	0.25210	0.79652
RegionR4	1.695	2.181	0.08011	0.26520
RegionR5	0.16	2.181	0.71171	1.00000
RegionR6	-1.692	2.181	0.99735	1.00000
RegionR7	1.184	2.181	0.33965	0.97588
RegionR8	-3.94	2.181	0.27261	0.89573

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.95	2.181	0.27236	0.97545
RegenerationR2	-1.096	2.181	0.34238	0.77680
RegenerationR3	0.866	2.181	0.28463	0.71645
RegenerationR4	-0.472	2.181	0.55191	0.89331
RegenerationR5	0.265	2.181	0.74614	0.97073
RegenerationR6	2.487	2.181	0.01734	0.16255
RegenerationBL	0.792	2.181	0.61724	0.96093
RegenerationTP	1.393	2.181	0.52282	0.91551

Genes with expression patterns similar to MligTC455_34731

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34731	105	2.18	Mlig455_056121	Neo: - Age: Up-Up-Down	XDH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056121 {REF} {Length: 4336} {Pfam: [2Fe-2S] binding domain [PF01799.22, score=99.3]; CO dehydrogenase flavoprotein C-terminal domain [PF03450.19, score=98.4]; FAD binding domain in molybdopterin dehydrogenase [PF00941.23, score=60.9]; 2Fe-2S iron-sulfur cluster binding domain [PF00111.29, score=31.5]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=372, Expect=3e-115]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=376, Expect=1e-116]} {Dmel: FBgn0003308, ry, rosy, [Score=418, Expect=2e-132]} {Celegans: WBGene00010083, xhd-1, [Score=348, Expect=8e-107]} {RNA1310_2743} {RNA815_28439}
2.	MligTC455_26878	59	1.22	Mlig455_055105, Mlig455_055152	Neo: - Age: logFC(26M/2M)=-1.229 Region-enriched R4: 6.345/0.00000		2.607	-	-	0.793	0.951	-	0.863	Mlig455_055105 {REF} {Length: 1683} {RNA1509_57508} {RNA1310_13492} {RNA815_51660} Mlig455_055152 {REF} {Length: 1653} {RNA1509_57508} {RNA1310_13492, RNA1509_57508} {RNA1509_57508, RNA815_51660}
3.	MligTC455_02511	241	5.03	Mlig455_010299, Mlig455_065662	Neo: - Age: Down-Up-Up Region-specific R4: 4.092 Region-enriched R4: 4.034/0.00000	UBC	2.562	0.801	-	0.955	-	-	0.806	Mlig455_010299 {REF} {Length: 3709} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=24.3]} {RNA1509_22361} {RNA1310_28812} {RNA815_32600} Mlig455_065662 {REF} {Length: 3304} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=33.4]; Ubiquitin family [PF00240.25, score=24.4]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=58.2, Expect=4e-10]; ENSG00000170315, UBB, ubiquitin B, [Score=57.8, Expect=1e-09]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=57.8, Expect=2e-09]; ENSMUSG00000019505, Ubb, ubiquitin B, [Score=57.4, Expect=3e-09]} {Dmel: FBgn0086558, Ubi-p5E, Ubiquitin-5E, [Score=57.4, Expect=7e-09]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [Score=54.3, Expect=4e-09]} {Smed: dd_Smed_v6_458_0_1, dd_Smed_v6_458_0_1, [Score=54.7, Expect=9e-10]} {RNA1509_22361} {RNA1310_28812} {RNA815_35171}
4.	MligTC455_16999	17	0.35	Mlig455_028685	Neo: - Age: -		1.851	-	-	-	0.886	-	0.965	Mlig455_028685 {REF} {Length: 299} {NoTransDecoderORF} {RNA1310_50141}
5.	MligTC455_22311	74	1.53	Mlig455_001822	Neo: - Age: -		1.773	-	-	-	0.967	-	0.806	Mlig455_001822 {REF} {Length: 1911} {RNA1310_30832} {RNA815_15518}
6.	MligTC455_44529	87	1.82	Mlig455_037858	Neo: - Age: logFC(26M/2M)=0.525 Region-enriched R3: 3.357/0.01891 Region-enriched R4: 3.085/0.04752		1.694	-	-	-	0.989	-	0.705	Mlig455_037858 {REF} {Length: 1959} {Pfam: Universal stress protein family [PF00582.28, score=86.4]} {Smed: dd_Smed_v6_3388_0_1, dd_Smed_v6_3388_0_1, [Score=81.3, Expect=6e-20]} {RNA1509_59467} {RNA1310_35905} {RNA815_18113}
7.	MligTC455_42288	91	1.89	Mlig455_008158, Mlig455_008196	Neo: - Age: -		0.99	-	-	-	0.990	-	-	Mlig455_008158 {REF} {Length: 282} {NoTransDecoderORF} {RNA1310_118368} Mlig455_008196 {REF} {Length: 259} {NoTransDecoderORF} {RNA1310_118368}
8.	MligTC455_02031	55	1.14	Mlig455_027849	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.895		0.963	-	-	-	-	-	0.963	Mlig455_027849 {REF} {Length: 1333} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=116.8]} {Dmel: FBgn0034583, CG10527, [Score=97.1, Expect=8e-25]} {Smed: dd_Smed_v6_87_0_2, dd_Smed_v6_87_0_2, [Score=129, Expect=5e-39]} {RNA1509_43784} {RNA1310_100615} {RNA815_16844.2}
9.	MligTC455_45872	41	0.84	Mlig455_044122	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_044122 {REF} {Length: 624} {NoTransDecoderORF}
10.	MligTC455_12953	115	2.39	Mlig455_007905	Neo: - Age: logFC(26M/2M)=-1.120 Region-enriched R3: 3.172/0.00173	ENPP1	0.952	-	-	-	0.952	-	-	Mlig455_007905 {REF} {Length: 2256} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=279.2]; Sulfatase [PF00884.25, score=23.9]} {Human: ENSG00000197594, ENPP1, ectonucleotide pyrophosphatase/phosphodiesterase 1, [RH, Score=282, Expect=6e-86]; ENSG00000001561, ENPP4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [RH, Score=278, Expect=1e-88]} {Mouse: ENSMUSG00000023961, Enpp4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [RH, Score=278, Expect=6e-89]; ENSMUSG00000023960, Enpp5, ectonucleotide pyrophosphatase/phosphodiesterase 5, [RH, Score=272, Expect=2e-86]; ENSMUSG00000046697, Enpp7, ectonucleotide pyrophosphatase/phosphodiesterase 7, [RH, Score=268, Expect=4e-85]; ENSMUSG00000037370, Enpp1, ectonucleotide pyrophosphatase/phosphodiesterase 1, [RH, Score=268, Expect=6e-81]} {Celegans: WBGene00007753, C27A7.1, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1, [RH, Score=163, Expect=1e-43]} {Smed: dd_Smed_v6_9016_0_1, dd_Smed_v6_9016_0_1, [RH, Score=220, Expect=4e-66]} {RNA1509_4220} {RNA1310_25457} {RNA815_4584.2}

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