Data search
Results for MligTC455_34817
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34817 | 939 | 19.55 | Mlig455_009862 | Neo: Irradiation Age: Up-Down-Down |
Mlig455_009862 {REF} {Length: 3497} {TRANSSPLICED} {RNA1509_31823} {RNA1310_6923.1} {RNA815_5942} |
Cumulative graph for MligTC455_34817
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.506 | 4.444 | 0.47794 | 1.00000 | |
| RegionR2 | 0.354 | 4.444 | 0.41588 | 0.80869 | |
| RegionR3 | -0.877 | 4.444 | 0.01982 | 0.23575 | |
| RegionR4 | 0.464 | 4.444 | 0.19604 | 0.47436 | |
| RegionR5 | -0.669 | 4.444 | 0.03980 | 0.15886 | |
| RegionR6 | -0.392 | 4.444 | 0.27954 | 0.86936 | |
| RegionR7 | 0.407 | 4.444 | 0.34952 | 0.98639 | |
| RegionR8 | 0.208 | 4.444 | 0.71562 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.271 | 4.444 | 0.09889 | 0.81498 | |
| RegenerationR2 | -0.08 | 4.444 | 0.83897 | 1.00000 | |
| RegenerationR3 | 0.764 | 4.444 | 0.08685 | 0.47867 | |
| RegenerationR4 | -0.361 | 4.444 | 0.35482 | 0.78406 | |
| RegenerationR5 | 0.825 | 4.444 | 0.02885 | 0.28611 | |
| RegenerationR6 | 0.802 | 4.444 | 0.05770 | 0.30132 | |
| RegenerationBL | -0.529 | 4.444 | 0.31630 | 0.68293 | |
| RegenerationTP | -0.603 | 4.444 | 0.27725 | 0.72526 |
Genes with expression patterns similar to MligTC455_34817
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34817 | 939 | 19.55 | Mlig455_009862 | Neo: Irradiation Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009862 {REF} {Length: 3497} {TRANSSPLICED} {RNA1509_31823} {RNA1310_6923.1} {RNA815_5942} | |
| 2. | MligTC455_24144 | 123 | 2.55 | Mlig455_069389 | Neo: - Age: - Region-specific R4: 5.241 Region-enriched R4: 4.115/0.00015 |
2.46 | 0.757 | 0.955 | - | 0.748 | - | - | Mlig455_069389 {REF} {Length: 1744} {RNA1509_35501} {RNA1310_30027.1} {RNA815_13361} | |
| 3. | MligTC455_16722 | 2022 | 42.12 | Mlig455_001580, Mlig455_060120 | Neo: - Age: - |
SORT1 | 1.742 | - | - | - | - | 0.951 | 0.791 | Mlig455_001580 {REF} {Length: 3841} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=246.2]; Sortilin, neurotensin receptor 3, C-terminal [PF15901.7, score=88.9]; BNR/Asp-box repeat [PF02012.22, score=30.9]; BNR repeat-like domain [PF13088.8, score=18.1]} {Human: ENSG00000134243, SORT1, sortilin 1, [Score=328, Expect=7e-99]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [Score=335, Expect=2e-101]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [Score=483, Expect=1e-158]} {RNA1509_1193, RNA1509_27254} {RNA1310_4487, RNA1509_27254} {RNA1509_27254, RNA815_1034} Mlig455_060120 {REF} {Length: 4319} {Pfam: Sortilin, neurotensin receptor 3, [PF15902.7, score=247.3]; Sortilin, neurotensin receptor 3, C-terminal [PF15901.7, score=111.1]; BNR/Asp-box repeat [PF02012.22, score=30.6]} {Human: ENSG00000134243, SORT1, sortilin 1, [RH, Score=350, Expect=4e-107]} {Mouse: ENSMUSG00000068747, Sort1, sortilin 1, [RH, Score=363, Expect=4e-112]} {Smed: dd_Smed_v6_1666_0_1, dd_Smed_v6_1666_0_1, [RH, Score=514, Expect=1e-170]} {RNA1509_1193, RNA1509_9859} {RNA1310_4487, RNA1509_1193, RNA1509_9859} {RNA1509_1193, RNA1509_9859, RNA815_1034} |
| 4. | MligTC455_50819 | 291 | 6.07 | Mlig455_060356 | Neo: - Age: - |
1.711 | - | - | 0.752 | - | 0.959 | - | Mlig455_060356 {REF} {Length: 2286} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [RH, Score=92.0, Expect=2e-21]} {RNA1509_34165} {RNA1310_28074.2} {RNA815_19770} | |
| 5. | MligTC455_50132 | 162 | 3.37 | Mlig455_043179 | Neo: Int S/G2/M Age: Down-Up-Down |
PFDN1 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_043179 {REF} {Length: 694} {Pfam: Prefoldin subunit [PF01920.22, score=63.7]} {Human: ENSG00000113068, PFDN1, prefoldin subunit 1, [RH, Score=91.3, Expect=2e-24]} {Mouse: ENSMUSG00000024346, Pfdn1, prefoldin 1, [RH, Score=91.3, Expect=2e-24]} {Dmel: FBgn0031776, Pfdn1, Prefoldin 1, [RH, Score=72.0, Expect=5e-17]} {Celegans: WBGene00007443, pfd-1, Probable prefoldin subunit 1, [RH, Score=49.7, Expect=1e-08]} {RNA1509_23029, RNA1509_51158} {RNA1310_46841, RNA1509_23029, RNA1509_51158} {RNA1509_23029, RNA1509_51158, RNA815_26502} |
| 6. | MligTC455_32934 | 1035 | 21.55 | Mlig455_016041, Mlig455_054972 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_016041 {REF} {Length: 4699} {Pfam: Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=52.9]; Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=43.8]} {Celegans: WBGene00018060, arrd-18, ARRestin Domain protein, [Score=65.1, Expect=3e-11]} {RNA1509_32006, RNA1509_44865, RNA1509_9053} {RNA1310_20590, RNA1509_32006, RNA1509_44865, RNA1509_9053} {RNA1509_32006, RNA1509_44865, RNA1509_9053, RNA815_9539} Mlig455_054972 {REF} {Length: 645} {NoTransDecoderORF} {RNA1509_44865} {RNA1310_31849} {RNA815_8150.1} |