TomoSeq data search

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Results for MligTC455_34828

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34828	214	4.45	Mlig455_047952	Neo: - Age: logFC(26M/2M)=-0.312		Mlig455_047952 {REF} {Length: 2377} {RNA1509_25809} {RNA1310_27224.1, RNA1509_25809} {RNA1509_25809, RNA815_4317.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_34828

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.96	2.657	0.28985	0.94165
RegionR2	-1.008	2.657	0.98742	1.00000
RegionR3	0.137	2.657	0.79854	1.00000
RegionR4	1.541	2.657	0.13847	0.37944
RegionR5	0.782	2.657	0.38801	0.74376
RegionR6	0.783	2.657	0.39979	0.97166
RegionR7	1.057	2.657	0.31032	0.94458
RegionR8	1.667	2.657	0.12161	0.64123

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.281	2.657	1.00000	1.00000
RegenerationR2	0.124	2.657	0.84187	1.00000
RegenerationR3	-0.2	2.657	0.76341	0.96883
RegenerationR4	0.209	2.657	0.77058	0.97676
RegenerationR5	0.092	2.657	0.88897	1.00000
RegenerationR6	-0.694	2.657	0.30716	0.65574
RegenerationBL	-0.255	2.657	0.72196	1.00000
RegenerationTP	-0.314	2.657	0.67741	1.00000

Genes with expression patterns similar to MligTC455_34828

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34828	214	4.45	Mlig455_047952	Neo: - Age: logFC(26M/2M)=-0.312	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_047952 {REF} {Length: 2377} {RNA1509_25809} {RNA1310_27224.1, RNA1509_25809} {RNA1509_25809, RNA815_4317.1}
2.	MligTC455_43404	387	8.06	Mlig455_018715	Neo: - Age: Down-Up-Down	0.965	-	-	-	0.965	-	-	Mlig455_018715 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_11398, RNA1509_39356} {RNA1310_877.1, RNA1509_39356} {RNA1509_39356, RNA815_21988}
3.	MligTC455_33665	566	11.79	Mlig455_018419, Mlig455_018421, Mlig455_019322, Mlig455_048837	Neo: - Age: logFC(26M/2M)=-1.062 Region-enriched R2: 2.245/0.00138	0.95	-	-	-	0.950	-	-	Mlig455_018419 {REF} {Length: 629} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073} Mlig455_018421 {REF} {Length: 1329} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073} Mlig455_019322 {REF} {Length: 6075} {RNA1509_38197, RNA1509_56039} {RNA1310_15214.1, RNA1509_56039} {RNA1509_56039, RNA815_15612} Mlig455_048837 {REF} {Length: 2037} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1310_31113, RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1509_15574, RNA1509_25254, RNA1509_35176, RNA815_16073}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_34828

214

4.45

Mlig455_047952

Neo: -

Age: logFC(26M/2M)=-0.312

1.000

Mlig455_047952 {REF} {Length: 2377} {RNA1509_25809} {RNA1310_27224.1, RNA1509_25809} {RNA1509_25809, RNA815_4317.1}

MligTC455_43404

387

8.06

Mlig455_018715

Neo: -

Age: Down-Up-Down

0.965

Mlig455_018715 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_11398, RNA1509_39356} {RNA1310_877.1, RNA1509_39356} {RNA1509_39356, RNA815_21988}

MligTC455_33665

566

11.79

Mlig455_018419, Mlig455_018421, Mlig455_019322, Mlig455_048837

Neo: -

Age: logFC(26M/2M)=-1.062

Region-enriched R2: 2.245/0.00138

0.95

0.950

Mlig455_018419 {REF} {Length: 629} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_23746} {RNA815_16073}

Mlig455_018421 {REF} {Length: 1329} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_25254} {RNA1310_31113} {RNA815_16073}

Mlig455_019322 {REF} {Length: 6075} {RNA1509_38197, RNA1509_56039} {RNA1310_15214.1, RNA1509_56039} {RNA1509_56039, RNA815_15612}

Mlig455_048837 {REF} {Length: 2037} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1310_31113, RNA1509_15574, RNA1509_25254, RNA1509_35176} {RNA1509_15574, RNA1509_25254, RNA1509_35176, RNA815_16073}