TomoSeq data search

Data search

Results for MligTC455_34845

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_34845	19546	407.20	Mlig455_003109, Mlig455_026407	Neo: Int S/G2/M Age: -	RPS7, SKOR2	Mlig455_003109 {REF} {Length: 2713} {Pfam: SKI/SNO/DAC family [PF02437.19, score=129.4]; c-SKI Smad4 binding domain [PF08782.12, score=94.5]} {Human: ENSG00000215474, SKOR2, SKI family transcriptional corepressor 2, [RH, Score=337, Expect=8e-105]; ENSG00000188779, SKOR1, SKI family transcriptional corepressor 1, [RH, Score=325, Expect=4e-101]} {Mouse: ENSMUSG00000091519, Skor2, SKI family transcriptional corepressor 2, [RH, Score=338, Expect=2e-105]; ENSMUSG00000022245, Skor1, SKI family transcriptional corepressor 1, [RH, Score=325, Expect=4e-101]} {Dmel: FBgn0039932, fuss, fussel, [RH, Score=331, Expect=5e-105]} {Smed: dd_Smed_v6_64650_0_1, dd_Smed_v6_64650_0_1, [RH, Score=273, Expect=2e-90]} Mlig455_026407 {REF} {Length: 845} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=261.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [RH, Score=257, Expect=1e-87]} {Mouse: ENSMUSG00000044424, Gm9493, predicted gene 9493, [RH, Score=257, Expect=9e-88]; ENSMUSG00000061477, Rps7, ribosomal protein S7, [RH, Score=257, Expect=7e-88]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [RH, Score=239, Expect=1e-80]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [RH, Score=217, Expect=4e-72]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [RH, Score=223, Expect=1e-74]} {RNA1509_1986, RNA1509_30323, RNA1509_856} {RNA1310_42140, RNA1509_1986, RNA1509_30323, RNA1509_856} {RNA1509_1986, RNA1509_30323, RNA1509_856, RNA815_20536}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34845

19546

407.20

Mlig455_003109, Mlig455_026407

Neo: Int S/G2/M

Age: -

RPS7, SKOR2

Mlig455_003109 {REF} {Length: 2713} {Pfam: SKI/SNO/DAC family [PF02437.19, score=129.4]; c-SKI Smad4 binding domain [PF08782.12, score=94.5]} {Human: ENSG00000215474, SKOR2, SKI family transcriptional corepressor 2, [RH, Score=337, Expect=8e-105]; ENSG00000188779, SKOR1, SKI family transcriptional corepressor 1, [RH, Score=325, Expect=4e-101]} {Mouse: ENSMUSG00000091519, Skor2, SKI family transcriptional corepressor 2, [RH, Score=338, Expect=2e-105]; ENSMUSG00000022245, Skor1, SKI family transcriptional corepressor 1, [RH, Score=325, Expect=4e-101]} {Dmel: FBgn0039932, fuss, fussel, [RH, Score=331, Expect=5e-105]} {Smed: dd_Smed_v6_64650_0_1, dd_Smed_v6_64650_0_1, [RH, Score=273, Expect=2e-90]}

Mlig455_026407 {REF} {Length: 845} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=261.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [RH, Score=257, Expect=1e-87]} {Mouse: ENSMUSG00000044424, Gm9493, predicted gene 9493, [RH, Score=257, Expect=9e-88]; ENSMUSG00000061477, Rps7, ribosomal protein S7, [RH, Score=257, Expect=7e-88]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [RH, Score=239, Expect=1e-80]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [RH, Score=217, Expect=4e-72]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [RH, Score=223, Expect=1e-74]} {RNA1509_1986, RNA1509_30323, RNA1509_856} {RNA1310_42140, RNA1509_1986, RNA1509_30323, RNA1509_856} {RNA1509_1986, RNA1509_30323, RNA1509_856, RNA815_20536}

Cumulative graph for MligTC455_34845

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.184	8.729	0.00013	0.03543
RegionR2	-0.493	8.729	0.01706	0.13884
RegionR3	0.266	8.729	0.12023	0.59906
RegionR4	0.687	8.729	0.00044	0.00540
RegionR5	0.414	8.729	0.01269	0.06880
RegionR6	0.281	8.729	0.10135	0.58402
RegionR7	0.282	8.729	0.10665	0.62045
RegionR8	-0.252	8.729	0.22169	0.82928

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.323	8.729	0.40477	1.00000
RegenerationR2	-0.012	8.729	0.95686	1.00000
RegenerationR3	-0.298	8.729	0.18052	0.61658
RegenerationR4	-0.298	8.729	0.19004	0.63431
RegenerationR5	-0.34	8.729	0.11874	0.51731
RegenerationR6	-0.25	8.729	0.25959	0.60978
RegenerationBL	-0.05	8.729	0.79853	1.00000
RegenerationTP	-0.231	8.729	0.28086	0.72854

Genes with expression patterns similar to MligTC455_34845

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34845	19546	407.2	Mlig455_003109, Mlig455_026407	Neo: Int S/G2/M Age: -	RPS7, SKOR2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_003109 {REF} {Length: 2713} {Pfam: SKI/SNO/DAC family [PF02437.19, score=129.4]; c-SKI Smad4 binding domain [PF08782.12, score=94.5]} {Human: ENSG00000215474, SKOR2, SKI family transcriptional corepressor 2, [RH, Score=337, Expect=8e-105]; ENSG00000188779, SKOR1, SKI family transcriptional corepressor 1, [RH, Score=325, Expect=4e-101]} {Mouse: ENSMUSG00000091519, Skor2, SKI family transcriptional corepressor 2, [RH, Score=338, Expect=2e-105]; ENSMUSG00000022245, Skor1, SKI family transcriptional corepressor 1, [RH, Score=325, Expect=4e-101]} {Dmel: FBgn0039932, fuss, fussel, [RH, Score=331, Expect=5e-105]} {Smed: dd_Smed_v6_64650_0_1, dd_Smed_v6_64650_0_1, [RH, Score=273, Expect=2e-90]} Mlig455_026407 {REF} {Length: 845} {TRANSSPLICED} {Pfam: Ribosomal protein S7e [PF01251.20, score=261.7]} {Human: ENSG00000171863, RPS7, ribosomal protein S7, [RH, Score=257, Expect=1e-87]} {Mouse: ENSMUSG00000044424, Gm9493, predicted gene 9493, [RH, Score=257, Expect=9e-88]; ENSMUSG00000061477, Rps7, ribosomal protein S7, [RH, Score=257, Expect=7e-88]} {Dmel: FBgn0039757, RpS7, Ribosomal protein S7, [RH, Score=239, Expect=1e-80]} {Celegans: WBGene00004476, rps-7, 40S ribosomal protein S7, [RH, Score=217, Expect=4e-72]} {Smed: dd_Smed_v6_204_0_1, dd_Smed_v6_204_0_1, [RH, Score=223, Expect=1e-74]} {RNA1509_1986, RNA1509_30323, RNA1509_856} {RNA1310_42140, RNA1509_1986, RNA1509_30323, RNA1509_856} {RNA1509_1986, RNA1509_30323, RNA1509_856, RNA815_20536}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts