TomoSeq data search

Data search

Results for MligTC455_34856

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34856

11

0.23

Mlig455_068513

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.638

KRBA2

Mlig455_068513 {REF} {Length: 1891} {Pfam: Integrase core domain [PF00665.28, score=52.5]} {Human: ENSG00000184619, KRBA2, KRAB-A domain containing 2, [Score=53.5, Expect=7e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=116, Expect=8e-31]} {RNA1310_79393} {RNA815_50211}

Cumulative graph for MligTC455_34856

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.854	0.834	0.99972	1.00000
RegionR2	2.158	0.834	0.99983	1.00000
RegionR3	-1.727	0.834	0.99976	1.00000
RegionR4	-1.136	0.834	0.87139	1.00000
RegionR5	2.752	0.834	0.16346	0.42720
RegionR6	-1.623	0.834	0.99976	1.00000
RegionR7	1.112	0.834	0.99991	1.00000
RegionR8	1.316	0.834	0.99994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.319	0.834	0.99991	1.00000
RegenerationR2	1.049	0.834	0.61158	0.91993
RegenerationR3	3.337	0.834	0.16857	0.60273
RegenerationR4	-1.388	0.834	0.27770	0.72312
RegenerationR5	-1.099	0.834	0.57490	0.89801
RegenerationR6	0.475	0.834	0.99998	1.00000
RegenerationBL	-1.297	0.834	0.99990	1.00000
RegenerationTP	-0.288	0.834	1.00000	1.00000

Genes with expression patterns similar to MligTC455_34856

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34856	11	0.23	Mlig455_068513	Neo: - Age: Up-Down-Down, logFC(26M/2M)=0.638	KRBA2	3	1.000	1.000	-	-	1.000	-	Mlig455_068513 {REF} {Length: 1891} {Pfam: Integrase core domain [PF00665.28, score=52.5]} {Human: ENSG00000184619, KRBA2, KRAB-A domain containing 2, [Score=53.5, Expect=7e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=116, Expect=8e-31]} {RNA1310_79393} {RNA815_50211}
2.	MligTC455_16497	29	0.61	Mlig455_007796	Neo: Int S/G2/M Age: -		1.797	0.963	0.834	-	-	-	-	Mlig455_007796 {REF} {Length: 1192} {RNA1509_58333} {RNA1310_55385.1} {RNA815_38567}
3.	MligTC455_17881	22	0.45	Mlig455_031748	Neo: Germline Age: - Regeneration-upregulated R2: 5.638 Regeneration-enriched R2: 5.638		0.974	0.974	-	-	-	-	-	Mlig455_031748 {REF} {Length: 685} {RNA1509_51447} {RNA1310_119172} {RNA815_51383}
4.	MligTC455_26446	4	0.08	Mlig455_034972, Mlig455_035185, Mlig455_048944, Mlig455_050752, Mlig455_052071, Mlig455_058850, Mlig455_059939	Neo: - Age: Up-Down-Down		0.97	-	-	-	-	0.970	-	Mlig455_034972 {REF} {Length: 818} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=76.6, Expect=6e-16]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242} Mlig455_035185 {REF} {Length: 1706} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=82.8, Expect=6e-17]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242} Mlig455_048944 {REF} {Length: 1853} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=113, Expect=4e-27]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242} Mlig455_050752 {REF} {Length: 1709} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=82.4, Expect=8e-17]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242} Mlig455_052071 {REF} {Length: 1697} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=82.4, Expect=7e-17]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242} Mlig455_058850 {REF} {Length: 1961} {Pfam: Integrase zinc binding domain [PF17921.3, score=38.9]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=111, Expect=3e-26]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242} Mlig455_059939 {REF} {Length: 2090} {Pfam: Integrase zinc binding domain [PF17921.3, score=38.7]} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=111, Expect=3e-26]} {RNA1509_10005} {RNA1310_397.1} {RNA815_10242}
5.	MligTC455_30804	48	1	Mlig455_069857	Neo: Irradiation Age: logFC(26M/2M)=-1.954 Region-enriched R5: 4.145/0.00026	PIF1	0.962	0.962	-	-	-	-	-	Mlig455_069857 {REF} {Length: 6831} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=313.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=114.0]; AAA domain [PF13604.8, score=44.8]; Helicase [PF02689.16, score=22.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=22.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=84.0, Expect=1e-15]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=88.6, Expect=3e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=77.8, Expect=5e-14]} {Celegans: WBGene00018020, F33H12.6, [Score=688, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=90.5, Expect=4e-18]} {RNA1509_33821} {RNA1310_13678} {RNA815_358.1}
6.	MligTC455_15741	105	2.19	Mlig455_039981	Neo: - Age: Down-Up-Up		0.958	-	-	-	-	0.958	-	Mlig455_039981 {REF} {Length: 1510} {Pfam: AMP-binding enzyme [PF00501.30, score=18.9]} {RNA1509_21701} {RNA1310_34458} {RNA815_5254}
7.	MligTC455_30640	21	0.43	Mlig455_033340, Mlig455_059920, Mlig455_059921	Neo: Int S/G2/M Age: Up-Down-Down, logFC(26M/2M)=-0.471		0.955	0.955	-	-	-	-	-	Mlig455_033340 {REF} {Length: 1064} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=115.7]} {RNA1310_20156} {RNA815_48681} Mlig455_059920 {REF} {Length: 6501} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=108.0]} {RNA1509_55441} {RNA1310_13439} {RNA815_28604} Mlig455_059921 {REF} {Length: 1555} {NoTransDecoderORF} {RNA1509_55441} {RNA1310_69678.1} {RNA815_49809}
8.	MligTC455_32282	46	0.97	Mlig455_033935, Mlig455_061416	Neo: - Age: - Region-enriched R5: 4.266/0.00026		0.952	0.952	-	-	-	-	-	Mlig455_033935 {REF} {Length: 1015} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.2]} {RNA1509_10085} {RNA1310_6627.1} {RNA815_38476} Mlig455_061416 {REF} {Length: 1019} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.8]} {RNA1509_10085} {RNA1310_6627.1} {RNA815_38476}
9.	MligTC455_31679	20	0.43	Mlig455_022701	Neo: - Age: -	PIF1	0.95	0.950	-	-	-	-	-	Mlig455_022701 {REF} {Length: 5983} {Pfam: PIF1-like helicase [PF05970.16, score=331.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=200.2]; AAA domain [PF13604.8, score=45.4]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=90.1, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=89.0, Expect=2e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=800, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=3e-23]} {RNA1509_7410} {RNA1310_1350} {RNA815_358.1}

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