M. lignano Tomo-Seq
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Results for MligTC455_34898

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34898 19 0.39 Mlig455_014859

Neo: -

Age: -

Region-enriched R4: 6.471/0.00540
Region-enriched R5: 4.797/0.01316

 CTBP2 Mlig455_014859 {REF} {Length: 2371} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=105.6]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=61.8]; THAP domain [PF05485.14, score=37.4]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [Score=320, Expect=1e-101]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [Score=315, Expect=7e-100]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [Score=320, Expect=2e-96]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [Score=318, Expect=3e-101]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [Score=315, Expect=6e-101]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [Score=437, Expect=2e-143]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [Score=318, Expect=5e-101]} {RNA1310_37204} {RNA815_62906}

Cumulative graph for MligTC455_34898

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.945 0.691 0.99968 1.00000
RegionR2 -0.845 0.691 1.00000 1.00000
RegionR3 -0.891 0.691 0.99982 1.00000
RegionR4 6.471 0.691 0.00044 0.00540
RegionR5 4.797 0.691 0.00138 0.01316
RegionR6 0.784 0.691 1.00000 1.00000
RegionR7 -1.026 0.691 1.00000 1.00000
RegionR8 -1.346 0.691 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.099 0.691 0.99989 1.00000
RegenerationR2 0.184 0.691 0.28968 0.73257
RegenerationR3 1.189 0.691 0.99956 1.00000
RegenerationR4 -2.466 0.691 0.99967 1.00000
RegenerationR5 -3.925 0.691 0.02858 0.28527
RegenerationR6 -0.79 0.691 1.00000 1.00000
RegenerationBL -3.53 0.691 0.99988 1.00000
RegenerationTP 0.127 0.691 1.00000 1.00000


Genes with expression patterns similar to MligTC455_34898

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34898 19 0.39 Mlig455_014859

Neo: -

Age: -

Region-enriched R4: 6.471/0.00540
Region-enriched R5: 4.797/0.01316

 CTBP2 2 - - 1.000 1.000 - - Mlig455_014859 {REF} {Length: 2371} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=105.6]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=61.8]; THAP domain [PF05485.14, score=37.4]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [Score=320, Expect=1e-101]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [Score=315, Expect=7e-100]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [Score=320, Expect=2e-96]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [Score=318, Expect=3e-101]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [Score=315, Expect=6e-101]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [Score=437, Expect=2e-143]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [Score=318, Expect=5e-101]} {RNA1310_37204} {RNA815_62906}
2. MligTC455_41297 10 0.21 Mlig455_015247

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_015247 {REF} {Length: 738} {NoTransDecoderORF}
3. MligTC455_12013 25 0.52 Mlig455_011463

Neo: -

Age: -

 0.988 - - 0.988 - - - Mlig455_011463 {REF} {Length: 826} {NoTransDecoderORF} {RNA1310_97403}
4. MligTC455_49932 27 0.57 Mlig455_067660

Neo: -

Age: -

Region-enriched R2: 5.207/0.00812

 0.988 - - 0.988 - - - Mlig455_067660 {REF} {Length: 2168} {RNA1310_116606}
5. MligTC455_44868 14 0.3 Mlig455_051869, Mlig455_053148

Neo: -

Age: -

 CALM1, CALM2 0.981 - - 0.981 - - -

Mlig455_051869 {REF} {Length: 320} {Pfam: EF hand [PF00036.34, score=79.1]; EF-hand domain pair [PF13499.8, score=77.0]; EF-hand domain pair [PF13833.8, score=75.0]; EF hand [PF13202.8, score=66.9]; EF-hand domain [PF13405.8, score=65.8]; EF-hand domain [PF14658.8, score=30.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=21.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=103, Expect=1e-28]; ENSG00000198668, CALM1, calmodulin 1, [Score=102, Expect=3e-29]; ENSG00000160014, CALM3, calmodulin 3, [Score=102, Expect=3e-29]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=102, Expect=2e-29]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=102, Expect=6e-29]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=102, Expect=6e-29]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=103, Expect=3e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=102, Expect=9e-30]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=102, Expect=2e-29]} {RNA1509_22382} {RNA1310_25980} {RNA815_41318}

Mlig455_053148 {REF} {Length: 916} {Pfam: EF-hand domain pair [PF13499.8, score=114.2]; EF hand [PF00036.34, score=114.0]; EF-hand domain [PF13405.8, score=97.8]; EF-hand domain pair [PF13833.8, score=92.0]; EF hand [PF13202.8, score=81.7]; EF-hand domain [PF14658.8, score=53.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=27.7]; Caleosin related protein [PF05042.15, score=27.0]; Tellurite resistance protein TerB [PF05099.15, score=19.6]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=172, Expect=2e-55]; ENSG00000160014, CALM3, calmodulin 3, [Score=172, Expect=2e-55]; ENSG00000143933, CALM2, calmodulin 2, [Score=172, Expect=2e-55]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=172, Expect=1e-55]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=172, Expect=1e-55]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=172, Expect=1e-55]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=172, Expect=5e-56]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=172, Expect=4e-56]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=172, Expect=3e-56]} {RNA1509_22382} {RNA1310_25980} {RNA815_41318}

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