Data search


search
Exact
Search

Results for MligTC455_34913

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_34913 286 5.96 Mlig455_024910

Neo: -

Age: Up-Down-Down

Mlig455_024910 {REF} {Length: 23626} {RNA1509_11799, RNA1509_1646, RNA1509_34385} {RNA1310_27206.2, RNA1509_11799, RNA1509_1646, RNA1509_34385} {RNA1509_11799, RNA1509_1646, RNA1509_34385, RNA815_50575}

Cumulative graph for MligTC455_34913

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.148 2.994 0.30766 0.95669
RegionR2 -0.558 2.994 0.44809 0.83636
RegionR3 1.323 2.994 0.00277 0.06295
RegionR4 -0.333 2.994 0.57027 0.88861
RegionR5 0.567 2.994 0.17401 0.44580
RegionR6 0.839 2.994 0.08684 0.54334
RegionR7 -2.011 2.994 0.07903 0.54246
RegionR8 -0.975 2.994 0.45904 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.578 2.994 0.74009 1.00000
RegenerationR2 0.527 2.994 0.40102 0.81488
RegenerationR3 -0.186 2.994 0.69765 0.94697
RegenerationR4 0.264 2.994 0.59124 0.90958
RegenerationR5 -0.345 2.994 0.42861 0.81689
RegenerationR6 -0.141 2.994 0.78420 0.96965
RegenerationBL 0.674 2.994 0.48096 0.84600
RegenerationTP 1.306 2.994 0.25755 0.70504


Genes with expression patterns similar to MligTC455_34913

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_34913 286 5.96 Mlig455_024910

Neo: -

Age: Up-Down-Down

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_024910 {REF} {Length: 23626} {RNA1509_11799, RNA1509_1646, RNA1509_34385} {RNA1310_27206.2, RNA1509_11799, RNA1509_1646, RNA1509_34385} {RNA1509_11799, RNA1509_1646, RNA1509_34385, RNA815_50575}
2. MligTC455_43213 450 9.38 Mlig455_041657

Neo: -

Age: -

BECN1 1.674 - 0.715 0.959 - - - Mlig455_041657 {REF} {Length: 3339} {TRANSSPLICED} {Pfam: Apg6 BARA domain [PF04111.14, score=136.6]; Apg6 coiled-coil region [PF17675.3, score=58.2]} {Human: ENSG00000126581, BECN1, beclin 1, [RH, Score=205, Expect=3e-60]} {Mouse: ENSMUSG00000035086, Becn1, beclin 1, autophagy related, [RH, Score=202, Expect=1e-59]} {Dmel: FBgn0264325, Atg6, Autophagy-related 6, [RH, Score=187, Expect=3e-54]} {Celegans: WBGene00000247, bec-1, Beclin homolog, [RH, Score=117, Expect=9e-29]} {Smed: dd_Smed_v6_5353_0_1, dd_Smed_v6_5353_0_1, [RH, Score=180, Expect=2e-51]} {RNA1509_16640, RNA1509_27883, RNA1509_51377} {RNA1310_18844, RNA1509_16640, RNA1509_27883, RNA1509_51377} {RNA1509_16640, RNA1509_27883, RNA1509_51377, RNA815_7657}
3. MligTC455_32712 35891 747.73 Mlig455_006504

Neo: Germline

Age: Down-Up-Down

WBP2NL 0.968 - - 0.968 - - - Mlig455_006504 {REF} {Length: 1205} {Human: ENSG00000183066, WBP2NL, WBP2 N-terminal like, [RH, Score=54.7, Expect=3e-08]} {Mouse: ENSMUSG00000022455, Wbp2nl, WBP2 N-terminal like, [Score=59.3, Expect=1e-09]} {RNA1509_47} {RNA1310_34773.1} {RNA815_15363.2}
4. MligTC455_17777 241 5.01 Mlig455_025275, Mlig455_025609

Neo: -

Age: logFC(26M/2M)=0.311

SLC9B2 0.961 - - - 0.961 - -

Mlig455_025275 {REF} {Length: 3634} {TRANSSPLICED} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=86.7]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [RH, Score=356, Expect=6e-116]} {Mouse: ENSMUSG00000037994, Slc9b2, solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2, [RH, Score=356, Expect=4e-116]} {Dmel: FBgn0031865, Nha1, Na[+]/H[+] hydrogen antiporter 1, [RH, Score=261, Expect=6e-78]} {Celegans: WBGene00009618, F41E7.2, [RH, Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_7736_0_2, dd_Smed_v6_7736_0_2, [RH, Score=355, Expect=1e-116]} {RNA1509_23649} {RNA1310_14179} {RNA815_5527.2}

Mlig455_025609 {REF} {Length: 3067} {TRANSSPLICED} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=88.4]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [RH, Score=354, Expect=2e-115]} {Mouse: ENSMUSG00000037994, Slc9b2, solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2, [RH, Score=355, Expect=1e-115]} {Dmel: FBgn0031865, Nha1, Na[+]/H[+] hydrogen antiporter 1, [RH, Score=262, Expect=2e-78]} {Celegans: WBGene00009618, F41E7.2, [RH, Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_7736_0_2, dd_Smed_v6_7736_0_2, [RH, Score=357, Expect=3e-117]} {RNA1509_23649} {RNA1310_14179, RNA1509_23649} {RNA1509_23649, RNA815_5527.2}
5. MligTC455_40549 363 7.56 Mlig455_034121

Neo: Int S/G2/M

Age: -

BIRC5 0.952 - - 0.952 - - - Mlig455_034121 {REF} {Length: 2611} {TRANSSPLICED} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=75.2]} {Human: ENSG00000089685, BIRC5, baculoviral IAP repeat containing 5, [RH, Score=89.7, Expect=2e-23]} {Mouse: ENSMUSG00000017716, Birc5, baculoviral IAP repeat-containing 5, [RH, Score=89.4, Expect=3e-23]} {Dmel: FBgn0264291, Det, Deterin, [RH, Score=79.3, Expect=3e-19]} {Celegans: WBGene00000250, bir-2, BIR (Baculovirus inhibitory repeat) family; Inhibitor of apoptosis homolog, [RH, Score=55.1, Expect=1e-09]} {Smed: dd_Smed_v6_14261_0_1, dd_Smed_v6_14261_0_1, [RH, Score=64.3, Expect=7e-14]} {RNA1509_45699, RNA1509_50700, RNA1509_53992} {RNA1310_55088, RNA1509_45699, RNA1509_50700, RNA1509_53992} {RNA1509_45699, RNA1509_50700, RNA1509_53992, RNA815_29489}
6. MligTC455_46479 2250 46.87 Mlig455_033103, Mlig455_033131

Neo: -

Age: logFC(26M/2M)=-0.327

UBE2H 0.95 - - 0.950 - - -

Mlig455_033103 {REF} {Length: 4346} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=125.0]} {Human: ENSG00000186591, UBE2H, ubiquitin conjugating enzyme E2 H, [RH, Score=295, Expect=4e-102]} {Mouse: ENSMUSG00000039159, Ube2h, ubiquitin-conjugating enzyme E2H, [RH, Score=295, Expect=3e-102]} {Dmel: FBgn0029996, UbcE2H, Ubiquitin conjugating enzyme E2H, [RH, Score=270, Expect=1e-92]} {Celegans: WBGene00006705, ubc-8, UBiquitin Conjugating enzyme, [RH, Score=251, Expect=8e-85]} {Smed: dd_Smed_v6_4514_0_1, dd_Smed_v6_4514_0_1, [RH, Score=270, Expect=5e-93]} {RNA1509_11885, RNA1509_18935, RNA1509_34559, RNA1509_49838, RNA1509_56271} {RNA1310_38676.1, RNA1509_11885, RNA1509_18935, RNA1509_34559, RNA1509_49838, RNA1509_56271} {RNA1509_11885, RNA1509_18935, RNA1509_34559, RNA1509_49838, RNA1509_56271, RNA815_9815.1}

Mlig455_033131 {REF} {Length: 4852} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=126.4]} {Human: ENSG00000186591, UBE2H, ubiquitin conjugating enzyme E2 H, [RH, Score=292, Expect=9e-102]} {Mouse: ENSMUSG00000039159, Ube2h, ubiquitin-conjugating enzyme E2H, [RH, Score=292, Expect=6e-102]} {Dmel: FBgn0029996, UbcE2H, Ubiquitin conjugating enzyme E2H, [RH, Score=268, Expect=1e-92]} {Celegans: WBGene00006705, ubc-8, UBiquitin Conjugating enzyme, [RH, Score=248, Expect=3e-84]} {Smed: dd_Smed_v6_4514_0_1, dd_Smed_v6_4514_0_1, [RH, Score=268, Expect=5e-93]} {RNA1509_18935} {RNA1310_42489.1} {RNA815_19970}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA