Data search


search
Exact
Search

Results for MligTC455_35016

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35016 28 0.59 Mlig455_005883, Mlig455_028665

Neo: -

Age: logFC(26M/2M)=-0.772

Region-enriched R2: 5.459/0.02485

Mlig455_005883 {REF} {Length: 2311} {Mouse: ENSMUSG00000050944, Efcab5, EF-hand calcium binding domain 5, [Score=51.6, Expect=3e-06]} {RNA1509_53857} {RNA1310_13464.1} {RNA815_15471.1}

Mlig455_028665 {REF} {Length: 2824} {Mouse: ENSMUSG00000050944, Efcab5, EF-hand calcium binding domain 5, [Score=52.4, Expect=1e-06]} {Dmel: FBgn0033636, tou, toutatis, [Score=57.4, Expect=3e-08]} {RNA1509_53857} {RNA1310_13464.1} {RNA815_15471.1}

Cumulative graph for MligTC455_35016

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.412 0.886 0.99985 1.00000
RegionR2 5.459 0.886 0.00120 0.02485
RegionR3 1.654 0.886 0.15042 0.65773
RegionR4 -2.866 0.886 0.99677 1.00000
RegionR5 0.304 0.886 0.73052 1.00000
RegionR6 -2.325 0.886 0.99970 1.00000
RegionR7 -0.854 0.886 0.99975 1.00000
RegionR8 5.041 0.886 0.00790 0.16517

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.198 0.886 0.99991 1.00000
RegenerationR2 -1.628 0.886 0.45840 0.85158
RegenerationR3 2.604 0.886 0.03394 0.32735
RegenerationR4 1.43 0.886 0.24556 0.69360
RegenerationR5 2.49 0.886 0.01933 0.24037
RegenerationR6 2.92 0.886 0.99983 1.00000
RegenerationBL 0.105 0.886 0.99985 1.00000
RegenerationTP 2.797 0.886 0.12415 0.53461


Genes with expression patterns similar to MligTC455_35016

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35016 28 0.59 Mlig455_005883, Mlig455_028665

Neo: -

Age: logFC(26M/2M)=-0.772

Region-enriched R2: 5.459/0.02485

4 1.000 1.000 - - 1.000 1.000

Mlig455_005883 {REF} {Length: 2311} {Mouse: ENSMUSG00000050944, Efcab5, EF-hand calcium binding domain 5, [Score=51.6, Expect=3e-06]} {RNA1509_53857} {RNA1310_13464.1} {RNA815_15471.1}

Mlig455_028665 {REF} {Length: 2824} {Mouse: ENSMUSG00000050944, Efcab5, EF-hand calcium binding domain 5, [Score=52.4, Expect=1e-06]} {Dmel: FBgn0033636, tou, toutatis, [Score=57.4, Expect=3e-08]} {RNA1509_53857} {RNA1310_13464.1} {RNA815_15471.1}
2. MligTC455_34520 250 5.2 Mlig455_027524, Mlig455_061031

Neo: -

Age: -

0.973 - - - - 0.973 -

Mlig455_027524 {REF} {Length: 2203} {RNA1509_36864} {RNA1310_46371} {RNA815_20991}

Mlig455_061031 {REF} {Length: 2568} {RNA1509_36864} {RNA1310_46371} {RNA815_20991}
3. MligTC455_04829 16 0.33 Mlig455_037402

Neo: -

Age: logFC(26M/2M)=0.473

Regeneration-enriched R4: 7.550
Regeneration-enriched R6: 5.557
Regeneration-enriched R3: 5.409
Regeneration-enriched R5: 4.942
Regeneration-enriched BL: 4.383

0.957 - - - - - 0.957 Mlig455_037402 {REF} {Length: 2706} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=34.9]} {RNA1509_48388} {RNA1310_8763.1, RNA1509_48388}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA