Data search


search
Exact
Search

Results for MligTC455_35066

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35066 201 4.19 Mlig455_037611

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.423

NTN1 Mlig455_037611 {REF} {Length: 4905} {Pfam: Laminin N-terminal (Domain VI) [PF00055.19, score=135.6]; Laminin EGF domain [PF00053.26, score=68.7]; UNC-6/NTR/C345C module [PF01759.23, score=58.4]} {Human: ENSG00000065320, NTN1, netrin 1, [Score=321, Expect=1e-99]} {Mouse: ENSMUSG00000020902, Ntn1, netrin 1, [Score=323, Expect=1e-100]} {Dmel: FBgn0015773, NetA, Netrin-A, [Score=285, Expect=4e-85]} {Celegans: WBGene00006746, unc-6, Netrin unc-6, [RH, Score=304, Expect=9e-94]} {Smed: dd_Smed_v6_14852_0_1, dd_Smed_v6_14852_0_1, [Score=284, Expect=1e-85]} {RNA1509_15111} {RNA1310_3973.1, RNA1509_15111} {RNA1509_15111, RNA815_21914}

Cumulative graph for MligTC455_35066

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.425 2.469 0.22221 0.86551
RegionR2 0.328 2.469 0.71763 1.00000
RegionR3 0.162 2.469 0.78629 1.00000
RegionR4 0.956 2.469 0.38039 0.70480
RegionR5 -0.579 2.469 0.96424 1.00000
RegionR6 1.265 2.469 0.12908 0.64951
RegionR7 1.706 2.469 0.05528 0.45245
RegionR8 1.587 2.469 0.13051 0.66231

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.104 2.469 1.00000 1.00000
RegenerationR2 0.192 2.469 0.73737 0.96879
RegenerationR3 -0.628 2.469 0.37596 0.78768
RegenerationR4 -1.173 2.469 0.14046 0.56254
RegenerationR5 -1.149 2.469 0.16492 0.59068
RegenerationR6 -0.448 2.469 0.50498 0.80975
RegenerationBL -1.318 2.469 0.10510 0.38277
RegenerationTP -1.809 2.469 0.03444 0.30963


Genes with expression patterns similar to MligTC455_35066

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35066 201 4.19 Mlig455_037611

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.423

NTN1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037611 {REF} {Length: 4905} {Pfam: Laminin N-terminal (Domain VI) [PF00055.19, score=135.6]; Laminin EGF domain [PF00053.26, score=68.7]; UNC-6/NTR/C345C module [PF01759.23, score=58.4]} {Human: ENSG00000065320, NTN1, netrin 1, [Score=321, Expect=1e-99]} {Mouse: ENSMUSG00000020902, Ntn1, netrin 1, [Score=323, Expect=1e-100]} {Dmel: FBgn0015773, NetA, Netrin-A, [Score=285, Expect=4e-85]} {Celegans: WBGene00006746, unc-6, Netrin unc-6, [RH, Score=304, Expect=9e-94]} {Smed: dd_Smed_v6_14852_0_1, dd_Smed_v6_14852_0_1, [Score=284, Expect=1e-85]} {RNA1509_15111} {RNA1310_3973.1, RNA1509_15111} {RNA1509_15111, RNA815_21914}
2. MligTC455_52325 682 14.2 Mlig455_061124

Neo: -

Age: logFC(26M/2M)=-0.271

Regeneration-downregulated BL: -1.826

Regeneration-depleted BL: -1.826

1.781 - - - - 0.955 0.826 Mlig455_061124 {REF} {Length: 9447} {Pfam: Fibrinogen binding protein [PF08017.13, score=176.9]} {RNA1509_13352, RNA1509_42393, RNA1509_55215, RNA1509_58455} {RNA1310_7913, RNA1509_13352, RNA1509_42393, RNA1509_55215, RNA1509_58455} {RNA1509_13352, RNA1509_42393, RNA1509_55215, RNA1509_58455, RNA815_2288}
3. MligTC455_23031 559 11.65 Mlig455_004920, Mlig455_019740

Neo: -

Age: logFC(26M/2M)=0.748

NLK 1.765 - - - - 0.966 0.799

Mlig455_004920 {REF} {Length: 2917} {Pfam: Protein kinase domain [PF00069.27, score=199.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.1]; Phosphotransferase enzyme family [PF01636.25, score=23.6]; Fungal protein kinase [PF17667.3, score=21.1]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=380, Expect=2e-126]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=380, Expect=1e-126]} {Dmel: FBgn0011817, nmo, nemo, [Score=369, Expect=7e-124]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [Score=347, Expect=4e-115]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [Score=350, Expect=3e-116]} {RNA1310_28916} {RNA815_34936}

Mlig455_019740 {REF} {Length: 3316} {Pfam: Protein kinase domain [PF00069.27, score=199.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.1]; Phosphotransferase enzyme family [PF01636.25, score=22.2]; Fungal protein kinase [PF17667.3, score=21.2]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000087095, NLK, nemo like kinase, [Score=367, Expect=9e-122]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [Score=367, Expect=7e-122]} {Dmel: FBgn0011817, nmo, nemo, [Score=364, Expect=2e-122]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [Score=344, Expect=3e-114]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [Score=351, Expect=8e-117]} {RNA1310_28916} {RNA815_34936}
4. MligTC455_53190 105 2.18 Mlig455_013516

Neo: -

Age: -

SCNN1B 1.747 0.956 - - - 0.791 - Mlig455_013516 {REF} {Length: 2819} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=290.8]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=158, Expect=8e-41]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=149, Expect=1e-37]} {Dmel: FBgn0051105, ppk22, pickpocket 22, [RH, Score=60.1, Expect=3e-09]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [RH, Score=166, Expect=2e-43]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [RH, Score=186, Expect=1e-51]} {RNA1509_18670} {RNA1310_20526} {RNA815_9932}
5. MligTC455_48267 778 16.21 Mlig455_047346

Neo: -

Age: Up-Down-Up

LENG8 1.723 - - 0.765 - 0.958 - Mlig455_047346 {REF} {Length: 3202} {Pfam: SAC3/GANP family [PF03399.18, score=76.1]} {Human: ENSG00000276458, LENG8, leukocyte receptor cluster member 8, [RH, Score=286, Expect=6e-86]; ENSG00000167615, LENG8, leukocyte receptor cluster member 8, [RH, Score=286, Expect=6e-86]; ENSG00000276681, LENG8, leukocyte receptor cluster member 8, [RH, Score=286, Expect=6e-86]; ENSG00000274305, LENG8, leukocyte receptor cluster member 8, [RH, Score=286, Expect=6e-86]} {Mouse: ENSMUSG00000035545, Leng8, leukocyte receptor cluster (LRC) member 8, [RH, Score=260, Expect=9e-77]} {Dmel: FBgn0032305, CG6700, [RH, Score=253, Expect=1e-73]} {Celegans: WBGene00017158, hpo-10, [RH, Score=192, Expect=5e-53]} {Smed: dd_Smed_v6_2926_0_3, dd_Smed_v6_2926_0_3, [RH, Score=278, Expect=2e-83]} {RNA1509_6802} {RNA1310_1963.1} {RNA815_2189.1}
6. MligTC455_41489 218 4.55 Mlig455_063751

Neo: -

Age: -

SLC18A3 1.694 0.961 - - - 0.733 - Mlig455_063751 {REF} {Length: 1991} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.8]; MFS_1 like family [PF12832.9, score=26.3]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [Score=103, Expect=5e-23]; ENSG00000036565, SLC18A1, solute carrier family 18 member A1, [Score=99.4, Expect=1e-21]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [Score=107, Expect=3e-24]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [Score=199, Expect=1e-56]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [Score=182, Expect=3e-51]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [Score=187, Expect=4e-53]} {RNA1509_37669} {RNA1310_14899.1, RNA1509_37669} {RNA1509_37669, RNA815_15265}
7. MligTC455_08048 40 0.82 Mlig455_038185

Neo: -

Age: -

Regeneration-upregulated R2: 6.812

Regeneration-enriched R2: 6.812

0.976 - - - - 0.976 - Mlig455_038185 {REF} {Length: 1125} {NoTransDecoderORF}
8. MligTC455_09295 18 0.37 Mlig455_021998

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_021998 {REF} {Length: 1197}
9. MligTC455_24713 148 3.09 Mlig455_001256

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.831

MARCH8 0.962 - - - - 0.962 - Mlig455_001256 {REF} {Length: 3753} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=56.5]} {Human: ENSG00000165406, MARCH8, membrane associated ring-CH-type finger 8, [RH, Score=226, Expect=7e-69]; ENSG00000145416, MARCH1, membrane associated ring-CH-type finger 1, [RH, Score=223, Expect=5e-68]; ENSG00000278545, MARCH8, membrane associated ring-CH-type finger 8, [RH, Score=220, Expect=3e-70]} {Mouse: ENSMUSG00000025702, March8, membrane-associated ring finger (C3HC4) 8, [RH, Score=228, Expect=4e-73]; ENSMUSG00000036469, March1, membrane-associated ring finger (C3HC4) 1, [RH, Score=226, Expect=6e-72]} {Dmel: FBgn0035983, CG4080, [RH, Score=222, Expect=5e-67]} {Celegans: WBGene00007643, marc-3, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [RH, Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_4997_0_2, dd_Smed_v6_4997_0_2, [RH, Score=244, Expect=7e-78]} {RNA1509_23175} {RNA1310_20001} {RNA815_11300}
10. MligTC455_02975 125 2.61 Mlig455_022830, Mlig455_022831, Mlig455_031047, Mlig455_031054

Neo: -

Age: -

0.959 - - - - 0.959 -

Mlig455_022830 {REF} {Length: 2561} {RNA1509_43679} {RNA1310_39376} {RNA815_22872.1}

Mlig455_022831 {REF} {Length: 1042} {NoTransDecoderORF} {RNA1509_48098} {RNA1310_55996} {RNA815_6533.1}

Mlig455_031047 {REF} {Length: 2122} {NoTransDecoderORF} {RNA1509_42928} {RNA1310_37500} {RNA815_25813.2}

Mlig455_031054 {REF} {Length: 7970} {RNA1509_42928, RNA1509_48098} {RNA1310_31923, RNA1509_48098} {RNA1509_48098, RNA815_22872.1}
11. MligTC455_30435 177 3.69 Mlig455_005918, Mlig455_019586, Mlig455_031986, Mlig455_068070

Neo: -

Age: -

0.954 - - - - 0.954 -

Mlig455_005918 {REF} {Length: 324} {NoTransDecoderORF} {RNA1509_11239} {RNA1310_7897.2} {RNA815_2064.1}

Mlig455_019586 {REF} {Length: 554} {NoTransDecoderORF} {RNA1509_11239} {RNA1310_50394} {RNA815_2064.1}

Mlig455_031986 {REF} {Length: 317} {NoTransDecoderORF} {RNA1509_11239} {RNA1310_50394} {RNA815_2064.1}

Mlig455_068070 {REF} {Length: 654} {NoTransDecoderORF} {RNA1509_11239} {RNA1310_50394} {RNA815_2064.1}
12. MligTC455_31883 26 0.55 Mlig455_027645

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_027645 {REF} {Length: 5225} {TRANSSPLICED} {RNA1509_47605} {RNA1310_622.1, RNA1509_47605} {RNA1509_47605, RNA815_2514.1}
13. MligTC455_31978 17 0.36 Mlig455_065471

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_065471 {REF} {Length: 1840} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=23.5]} {Smed: dd_Smed_v6_26560_0_2, dd_Smed_v6_26560_0_2, [Score=65.9, Expect=7e-12]} {RNA1509_46373} {RNA1310_112946} {RNA815_7856.1}
14. MligTC455_33454 464 9.67 Mlig455_036962, Mlig455_069816

Neo: -

Age: Down-Up-Down

0.954 - - - - - 0.954

Mlig455_036962 {REF} {Length: 2292} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=21.6]; Protein melan-A [PF14991.8, score=21.4]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=20.7]; Domain of unknown function (DUF4381) [PF14316.8, score=20.2]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}

Mlig455_069816 {REF} {Length: 1681} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=19.7]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=19.5]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}
15. MligTC455_24034 143 2.98 Mlig455_019757

Neo: -

Age: logFC(26M/2M)=0.955

DSCAML1 0.953 - - - - - 0.953 Mlig455_019757 {REF} {Length: 4868} {Pfam: Fibronectin type III domain [PF00041.23, score=129.6]; Immunoglobulin domain [PF13927.8, score=41.2]; Immunoglobulin I-set domain [PF07679.18, score=35.7]; Immunoglobulin domain [PF13895.8, score=30.3]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=28.8]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [Score=119, Expect=3e-26]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [Score=119, Expect=2e-26]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=151, Expect=2e-36]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=79.3, Expect=2e-14]} {Smed: dd_Smed_v6_3024_0_2, dd_Smed_v6_3024_0_2, [Score=184, Expect=9e-47]} {RNA1509_9070} {RNA1310_454.1} {RNA815_227}
16. MligTC455_44424 133 2.77 Mlig455_065094

Neo: -

Age: -

CLK2 0.952 - - - - 0.952 - Mlig455_065094 {REF} {Length: 3117} {Pfam: Protein kinase domain [PF00069.27, score=162.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.7]} {Human: ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=471, Expect=3e-160]; ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=471, Expect=3e-160]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=450, Expect=5e-150]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=471, Expect=5e-160]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=449, Expect=8e-150]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=497, Expect=3e-156]} {Celegans: WBGene00006517, madd-3, [RH, Score=453, Expect=2e-148]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [RH, Score=516, Expect=2e-174]} {RNA1509_59560} {RNA1310_6540.1} {RNA815_4478}
17. MligTC455_33404 70 1.47 Mlig455_069193

Neo: -

Age: Up-Down-Down

0.95 - - - - 0.950 - Mlig455_069193 {REF} {Length: 4896} {Dmel: FBgn0030887, CG6867, [Score=50.8, Expect=6e-06]} {Smed: dd_Smed_v6_10785_0_1, dd_Smed_v6_10785_0_1, [RH, Score=397, Expect=2e-119]} {RNA1509_32085, RNA1509_46041} {RNA1310_4414.1, RNA1509_32085, RNA1509_46041} {RNA1509_32085, RNA1509_46041, RNA815_11897}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA