TomoSeq data search

Data search

Results for MligTC455_35079

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35079	158	3.30	Mlig455_048921	Neo: - Age: Up-Down-Up	RAB7A	Mlig455_048921 {REF} {Length: 1214} {Pfam: Ras family [PF00071.24, score=135.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.0]; ADP-ribosylation factor family [PF00025.23, score=48.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=20.9]} {Human: ENSG00000075785, RAB7A, RAB7A, member RAS oncogene family, [Score=145, Expect=5e-43]} {Mouse: ENSMUSG00000079477, Rab7, RAB7, member RAS oncogene family, [Score=145, Expect=4e-43]} {Dmel: FBgn0015795, Rab7, [Score=142, Expect=3e-42]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=146, Expect=1e-43]} {Smed: dd_Smed_v6_491_0_1, dd_Smed_v6_491_0_1, [Score=147, Expect=5e-44]} {RNA1509_46704} {RNA1310_24993} {RNA815_37374}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35079

158

3.30

Mlig455_048921

Neo: -

Age: Up-Down-Up

RAB7A

Mlig455_048921 {REF} {Length: 1214} {Pfam: Ras family [PF00071.24, score=135.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.0]; ADP-ribosylation factor family [PF00025.23, score=48.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=20.9]} {Human: ENSG00000075785, RAB7A, RAB7A, member RAS oncogene family, [Score=145, Expect=5e-43]} {Mouse: ENSMUSG00000079477, Rab7, RAB7, member RAS oncogene family, [Score=145, Expect=4e-43]} {Dmel: FBgn0015795, Rab7, [Score=142, Expect=3e-42]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=146, Expect=1e-43]} {Smed: dd_Smed_v6_491_0_1, dd_Smed_v6_491_0_1, [Score=147, Expect=5e-44]} {RNA1509_46704} {RNA1310_24993} {RNA815_37374}

Cumulative graph for MligTC455_35079

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.77	2.315	0.21522	0.85587
RegionR2	-1.348	2.315	0.10239	0.39416
RegionR3	0.282	2.315	0.62865	1.00000
RegionR4	0.984	2.315	0.12846	0.36256
RegionR5	0.654	2.315	0.21853	0.51947
RegionR6	0.193	2.315	0.75125	1.00000
RegionR7	-1.756	2.315	0.14517	0.70916
RegionR8	-0.779	2.315	0.56764	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.969	2.315	0.58866	1.00000
RegenerationR2	0.822	2.315	0.22161	0.66885
RegenerationR3	-0.471	2.315	0.46734	0.84223
RegenerationR4	-0.379	2.315	0.53343	0.88568
RegenerationR5	-0.427	2.315	0.45670	0.83421
RegenerationR6	-0.841	2.315	0.25241	0.60220
RegenerationBL	0.19	2.315	0.85892	1.00000
RegenerationTP	0.689	2.315	0.57082	0.94496

Genes with expression patterns similar to MligTC455_35079

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35079	158	3.3	Mlig455_048921	Neo: - Age: Up-Down-Up	RAB7A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_048921 {REF} {Length: 1214} {Pfam: Ras family [PF00071.24, score=135.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=89.0]; ADP-ribosylation factor family [PF00025.23, score=48.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.3]; 50S ribosome-binding GTPase [PF01926.25, score=20.9]} {Human: ENSG00000075785, RAB7A, RAB7A, member RAS oncogene family, [Score=145, Expect=5e-43]} {Mouse: ENSMUSG00000079477, Rab7, RAB7, member RAS oncogene family, [Score=145, Expect=4e-43]} {Dmel: FBgn0015795, Rab7, [Score=142, Expect=3e-42]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=146, Expect=1e-43]} {Smed: dd_Smed_v6_491_0_1, dd_Smed_v6_491_0_1, [Score=147, Expect=5e-44]} {RNA1509_46704} {RNA1310_24993} {RNA815_37374}
2.	MligTC455_50933	280	5.83	Mlig455_011495	Neo: - Age: Down-Down-Up		0.958	-	-	-	-	0.958	-	Mlig455_011495 {REF} {Length: 3671} {TRANSSPLICED} {RNA1509_11429} {RNA1310_2886.1} {RNA815_8254}
3.	MligTC455_08804	967	20.15	Mlig455_022600	Neo: Int S/G2/M Age: - Region-enriched R4: 1.595/0.00074	AKIRIN1	0.953	-	-	-	-	0.953	-	Mlig455_022600 {REF} {Length: 3262} {TRANSSPLICED} {Human: ENSG00000174574, AKIRIN1, akirin 1, [RH, Score=81.6, Expect=1e-18]} {Mouse: ENSMUSG00000023075, Akirin1, akirin 1, [RH, Score=79.3, Expect=6e-18]} {Dmel: FBgn0082598, akirin, [Score=102, Expect=9e-27]} {Smed: dd_Smed_v6_12069_0_1, dd_Smed_v6_12069_0_1, [RH, Score=62.4, Expect=2e-12]} {RNA1509_5496} {RNA1310_22583.1} {RNA815_9467}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts