Data search
Results for MligTC455_35095
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35095 | 165 | 3.43 | Mlig455_059429 | Neo: - Age: Down-Up-Up |
CNNM2 | Mlig455_059429 {REF} {Length: 2386} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=120.8]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=202, Expect=2e-56]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=202, Expect=1e-56]} {Dmel: FBgn0262124, uex, unextended, [Score=177, Expect=5e-48]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=148, Expect=4e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [RH, Score=239, Expect=2e-74]} {RNA1509_31868} {RNA1310_14381.1} {RNA815_5292} |
Cumulative graph for MligTC455_35095
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.943 | 2.458 | 0.60104 | 1.00000 | |
| RegionR2 | -0.57 | 2.458 | 0.96515 | 1.00000 | |
| RegionR3 | 0.18 | 2.458 | 0.78396 | 1.00000 | |
| RegionR4 | 1.659 | 2.458 | 0.08982 | 0.28617 | |
| RegionR5 | -0.203 | 2.458 | 0.91023 | 1.00000 | |
| RegionR6 | -0.098 | 2.458 | 0.88662 | 1.00000 | |
| RegionR7 | 0.183 | 2.458 | 0.80270 | 1.00000 | |
| RegionR8 | 1.793 | 2.458 | 0.15569 | 0.71477 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.52 | 2.458 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.027 | 2.458 | 0.96009 | 1.00000 | |
| RegenerationR3 | -1.008 | 2.458 | 0.10841 | 0.51974 | |
| RegenerationR4 | -1.432 | 2.458 | 0.02557 | 0.25672 | |
| RegenerationR5 | 0.233 | 2.458 | 0.69618 | 0.95030 | |
| RegenerationR6 | 0.341 | 2.458 | 0.59469 | 0.86606 | |
| RegenerationBL | -0.294 | 2.458 | 0.70499 | 1.00000 | |
| RegenerationTP | -1.658 | 2.458 | 0.10308 | 0.49802 |
Genes with expression patterns similar to MligTC455_35095
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35095 | 165 | 3.43 | Mlig455_059429 | Neo: - Age: Down-Up-Up |
CNNM2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059429 {REF} {Length: 2386} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=120.8]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=202, Expect=2e-56]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=202, Expect=1e-56]} {Dmel: FBgn0262124, uex, unextended, [Score=177, Expect=5e-48]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=148, Expect=4e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [RH, Score=239, Expect=2e-74]} {RNA1509_31868} {RNA1310_14381.1} {RNA815_5292} |
| 2. | MligTC455_37301 | 189 | 3.93 | Mlig455_045354 | Neo: - Age: logFC(26M/2M)=-0.332 Region-enriched R4: 2.328/0.04450 |
ERBB4 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_045354 {REF} {Length: 7327} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=295.2]; Protein kinase domain [PF00069.27, score=137.7]; Receptor L domain [PF01030.26, score=52.9]; Furin-like cysteine rich region [PF00757.22, score=50.3]; Growth factor receptor domain IV [PF14843.8, score=48.4]} {Human: ENSG00000178568, ERBB4, erb-b2 receptor tyrosine kinase 4, [RH, Score=362, Expect=1e-103]; ENSG00000146648, EGFR, epidermal growth factor receptor, [RH, Score=352, Expect=1e-100]} {Mouse: ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [RH, Score=360, Expect=3e-103]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [RH, Score=509, Expect=3e-155]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [RH, Score=407, Expect=3e-119]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [RH, Score=504, Expect=6e-153]} {RNA1509_42246, RNA1509_47521, RNA1509_55812} {RNA1310_674, RNA1509_47521, RNA1509_55812} {RNA1509_47521, RNA1509_55812, RNA815_2089} |
| 3. | MligTC455_12684 | 278 | 5.79 | Mlig455_016753 | Neo: - Age: - |
CACNA1C | 0.95 | - | - | - | - | - | 0.950 | Mlig455_016753 {REF} {Length: 9320} {Pfam: Ion transport protein [PF00520.33, score=813.2]; Voltage gated calcium channel IQ domain [PF08763.13, score=96.3]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=90.6]; Polycystin cation channel [PF08016.14, score=22.4]} {Human: ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [RH, Score=1812, Expect=0.0]; ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [RH, Score=1812, Expect=0.0]; ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [RH, Score=1773, Expect=0.0]; ENSG00000081248, CACNA1S, calcium voltage-gated channel subunit alpha1 S, [RH, Score=1738, Expect=0.0]} {Mouse: ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [RH, Score=1822, Expect=0.0]; ENSMUSG00000015968, Cacna1d, calcium channel, voltage-dependent, L type, alpha 1D subunit, [RH, Score=1766, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [RH, Score=1935, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [RH, Score=1824, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_20, dd_Smed_v6_8899_0_20, [RH, Score=1966, Expect=0.0]} {RNA1509_7565} {RNA1310_601} {RNA815_3074} |
| 4. | MligTC455_21336 | 45 | 0.93 | Mlig455_027703 | Neo: - Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_027703 {REF} {Length: 3524} {NoTransDecoderORF} {RNA1509_50956} {RNA1310_80971} {RNA815_6115.1} |
Berezikov Lab - 2020-2021 © ERIBA