TomoSeq data search

Data search

Results for MligTC455_35147

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35147	726	15.13	Mlig455_037576	Neo: - Age: -	CTDSP2	Mlig455_037576 {REF} {Length: 1868} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=162.8]} {Human: ENSG00000175215, CTDSP2, CTD small phosphatase 2, [RH, Score=217, Expect=5e-69]} {Mouse: ENSMUSG00000078429, Ctdsp2, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, [Score=216, Expect=8e-69]; ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [Score=212, Expect=3e-67]; ENSMUSG00000047409, Ctdspl, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, [Score=206, Expect=7e-65]} {Dmel: FBgn0036556, CG5830, [Score=197, Expect=1e-60]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [Score=205, Expect=6e-65]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [Score=215, Expect=3e-64]} {RNA1509_10918, RNA1509_40988} {RNA1310_10350.1, RNA1509_10918, RNA1509_40988} {RNA1509_10918, RNA1509_40988, RNA815_4228.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35147

726

15.13

Mlig455_037576

Neo: -

Age: -

CTDSP2

Mlig455_037576 {REF} {Length: 1868} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=162.8]} {Human: ENSG00000175215, CTDSP2, CTD small phosphatase 2, [RH, Score=217, Expect=5e-69]} {Mouse: ENSMUSG00000078429, Ctdsp2, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, [Score=216, Expect=8e-69]; ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [Score=212, Expect=3e-67]; ENSMUSG00000047409, Ctdspl, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, [Score=206, Expect=7e-65]} {Dmel: FBgn0036556, CG5830, [Score=197, Expect=1e-60]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [Score=205, Expect=6e-65]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [Score=215, Expect=3e-64]} {RNA1509_10918, RNA1509_40988} {RNA1310_10350.1, RNA1509_10918, RNA1509_40988} {RNA1509_10918, RNA1509_40988, RNA815_4228.1}

Cumulative graph for MligTC455_35147

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.656	4.279	0.50195	1.00000
RegionR2	0.239	4.279	0.65369	0.98774
RegionR3	0.544	4.279	0.18937	0.72550
RegionR4	-0.159	4.279	0.75603	1.00000
RegionR5	0.325	4.279	0.39772	0.75424
RegionR6	0.35	4.279	0.40656	0.97634
RegionR7	-0.348	4.279	0.49661	1.00000
RegionR8	-0.295	4.279	0.60958	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.388	4.279	0.81536	1.00000
RegenerationR2	0.169	4.279	0.73799	0.96907
RegenerationR3	-0.3	4.279	0.58126	0.89944
RegenerationR4	0.094	4.279	0.86572	1.00000
RegenerationR5	-0.062	4.279	0.90427	1.00000
RegenerationR6	-0.172	4.279	0.75077	0.95256
RegenerationBL	-0.238	4.279	0.70490	1.00000
RegenerationTP	0.362	4.279	0.56729	0.94292

Genes with expression patterns similar to MligTC455_35147

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35147	726	15.13	Mlig455_037576	Neo: - Age: -	CTDSP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037576 {REF} {Length: 1868} {Pfam: NLI interacting factor-like phosphatase [PF03031.20, score=162.8]} {Human: ENSG00000175215, CTDSP2, CTD small phosphatase 2, [RH, Score=217, Expect=5e-69]} {Mouse: ENSMUSG00000078429, Ctdsp2, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2, [Score=216, Expect=8e-69]; ENSMUSG00000026176, Ctdsp1, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1, [Score=212, Expect=3e-67]; ENSMUSG00000047409, Ctdspl, CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like, [Score=206, Expect=7e-65]} {Dmel: FBgn0036556, CG5830, [Score=197, Expect=1e-60]} {Celegans: WBGene00007054, scpl-1, CTD small phosphatase-like protein 1, [Score=205, Expect=6e-65]} {Smed: dd_Smed_v6_8196_0_1, dd_Smed_v6_8196_0_1, [Score=215, Expect=3e-64]} {RNA1509_10918, RNA1509_40988} {RNA1310_10350.1, RNA1509_10918, RNA1509_40988} {RNA1509_10918, RNA1509_40988, RNA815_4228.1}
2.	MligTC455_16348	398	8.29	Mlig455_024441	Neo: - Age: - Region-enriched R6: 2.025/0.04475	SH3KBP1	1.677	-	-	0.959	0.718	-	-	Mlig455_024441 {REF} {Length: 2487} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=110.0]; Variant SH3 domain [PF07653.19, score=84.7]; SH3 domain [PF00018.30, score=84.0]} {Human: ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [RH, Score=93.6, Expect=8e-20]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [RH, Score=91.7, Expect=2e-19]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [RH, Score=77.0, Expect=8e-15]} {Celegans: WBGene00021549, Y44E3A.4, [RH, Score=70.5, Expect=8e-13]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [RH, Score=140, Expect=1e-36]} {RNA1509_22359} {RNA1310_6834} {RNA815_22315}
3.	MligTC455_33454	464	9.67	Mlig455_036962, Mlig455_069816	Neo: - Age: Down-Up-Down		0.966	-	-	0.966	-	-	-	Mlig455_036962 {REF} {Length: 2292} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=21.6]; Protein melan-A [PF14991.8, score=21.4]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=20.7]; Domain of unknown function (DUF4381) [PF14316.8, score=20.2]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1} Mlig455_069816 {REF} {Length: 1681} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=19.7]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=19.5]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35147

726

15.13

Mlig455_037576

Neo: -

Age: -

CTDSP2

1.000

MligTC455_16348

398

8.29

Mlig455_024441

Neo: -

Age: -

Region-enriched R6: 2.025/0.04475

SH3KBP1

1.677

0.959

0.718

Mlig455_024441 {REF} {Length: 2487} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=110.0]; Variant SH3 domain [PF07653.19, score=84.7]; SH3 domain [PF00018.30, score=84.0]} {Human: ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [RH, Score=93.6, Expect=8e-20]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [RH, Score=91.7, Expect=2e-19]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [RH, Score=77.0, Expect=8e-15]} {Celegans: WBGene00021549, Y44E3A.4, [RH, Score=70.5, Expect=8e-13]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [RH, Score=140, Expect=1e-36]} {RNA1509_22359} {RNA1310_6834} {RNA815_22315}

MligTC455_33454

464

9.67

Mlig455_036962, Mlig455_069816

Neo: -

Age: Down-Up-Down

0.966

Mlig455_036962 {REF} {Length: 2292} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=21.6]; Protein melan-A [PF14991.8, score=21.4]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=20.7]; Domain of unknown function (DUF4381) [PF14316.8, score=20.2]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}

Mlig455_069816 {REF} {Length: 1681} {Pfam: Glycosyltransferase family 87 [PF09594.12, score=19.7]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=19.5]} {RNA1509_36524} {RNA1310_29115.2} {RNA815_12947.1}