Data search
Results for MligTC455_35200
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35200 | 1617 | 33.68 | Mlig455_032254 | Neo: - Age: Down-Up-Down |
PCIF1 | Mlig455_032254 {REF} {Length: 2559} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=92.2]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [Score=60.8, Expect=2e-09]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [Score=57.8, Expect=1e-08]} {Dmel: FBgn0037021, CG11399, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=159, Expect=7e-45]} {RNA1509_6488} {RNA1310_7919.1} {RNA815_1884.1} |
Cumulative graph for MligTC455_35200
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.893 | 5.216 | 0.00551 | 0.23185 | |
| RegionR2 | -0.04 | 5.216 | 0.91367 | 1.00000 | |
| RegionR3 | 0.304 | 5.216 | 0.28868 | 0.83154 | |
| RegionR4 | 0.417 | 5.216 | 0.20169 | 0.48204 | |
| RegionR5 | 0.074 | 5.216 | 0.79417 | 1.00000 | |
| RegionR6 | 0.154 | 5.216 | 0.60552 | 1.00000 | |
| RegionR7 | 0.87 | 5.216 | 0.00772 | 0.14649 | |
| RegionR8 | 1.115 | 5.216 | 0.00323 | 0.09933 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.368 | 5.216 | 0.07501 | 0.76220 | |
| RegenerationR2 | 0.221 | 5.216 | 0.37804 | 0.80032 | |
| RegenerationR3 | -0.384 | 5.216 | 0.16257 | 0.59681 | |
| RegenerationR4 | -0.531 | 5.216 | 0.05888 | 0.38949 | |
| RegenerationR5 | -0.589 | 5.216 | 0.03150 | 0.29578 | |
| RegenerationR6 | -0.213 | 5.216 | 0.45920 | 0.77701 | |
| RegenerationBL | -0.589 | 5.216 | 0.05514 | 0.27180 | |
| RegenerationTP | -0.284 | 5.216 | 0.36739 | 0.80563 |
Genes with expression patterns similar to MligTC455_35200
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35200 | 1617 | 33.68 | Mlig455_032254 | Neo: - Age: Down-Up-Down |
PCIF1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032254 {REF} {Length: 2559} {Pfam: Phosphorylated CTD interacting factor 1 WW domain [PF12237.10, score=92.2]} {Human: ENSG00000100982, PCIF1, PDX1 C-terminal inhibiting factor 1, [Score=60.8, Expect=2e-09]} {Mouse: ENSMUSG00000039849, Pcif1, PDX1 C-terminal inhibiting factor 1, [Score=57.8, Expect=1e-08]} {Dmel: FBgn0037021, CG11399, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_4647_0_1, dd_Smed_v6_4647_0_1, [Score=159, Expect=7e-45]} {RNA1509_6488} {RNA1310_7919.1} {RNA815_1884.1} |
| 2. | MligTC455_25183 | 587 | 12.22 | Mlig455_005102 | Neo: - Age: Down-Up-Down Region-enriched R8: 2.221/0.00519 |
2.589 | - | - | 0.722 | 0.953 | 0.914 | - | Mlig455_005102 {REF} {Length: 3024} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=136.2]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=49.7, Expect=5e-06]} {Smed: dd_Smed_v6_20466_0_2, dd_Smed_v6_20466_0_2, [Score=84.3, Expect=5e-17]} {RNA1509_9013} {RNA1310_7298} {RNA815_2337} | |
| 3. | MligTC455_38594 | 1170 | 24.37 | Mlig455_010842 | Neo: - Age: Down-Up-Down |
1.763 | - | - | - | 0.802 | 0.961 | - | Mlig455_010842 {REF} {Length: 1254} {RNA1509_50765} {RNA1310_33848} {RNA815_31160} | |
| 4. | MligTC455_36140 | 362 | 7.54 | Mlig455_067735 | Neo: - Age: logFC(26M/2M)=-0.366 |
MGAT1 | 0.981 | - | - | - | - | 0.981 | - | Mlig455_067735 {REF} {Length: 2083} {Pfam: GNT-I family [PF03071.17, score=235.7]; Glycosyltransferase like family 2 [PF13641.8, score=24.3]; N-acetylglucosaminyltransferase II (MGAT2) [PF05060.16, score=20.9]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=166, Expect=7e-46]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=181, Expect=1e-51]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=172, Expect=5e-48]} {Celegans: WBGene00001637, gly-12, GLYcosylation related; UDP-N-acetylglucosamine:a-3-D-mannoside b-1,2-N-acetylglucosaminyltransferase I, [Score=171, Expect=6e-48]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=159, Expect=8e-44]} {RNA1310_12882.2} {RNA815_5789.1} |
| 5. | MligTC455_33335 | 312 | 6.49 | Mlig455_050543, Mlig455_067586, Mlig455_067622 | Neo: - Age: - |
NYNRIN | 0.96 | - | - | - | - | 0.960 | - | Mlig455_050543 {REF} {Length: 559} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.0]; Integrase zinc binding domain [PF17921.3, score=78.5]; Integrase core domain [PF00665.28, score=50.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=129, Expect=3e-29]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=131, Expect=5e-30]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=203, Expect=4e-56]} {RNA1509_38652} {RNA1310_115251} {RNA815_57269} Mlig455_067586 {REF} {Length: 684} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.0]; Integrase zinc binding domain [PF17921.3, score=78.5]; Integrase core domain [PF00665.28, score=50.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=129, Expect=3e-29]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=131, Expect=5e-30]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=203, Expect=4e-56]} {RNA1509_38652} {RNA1310_115251} {RNA815_57269} Mlig455_067622 {REF} {Length: 580} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.0]; Integrase zinc binding domain [PF17921.3, score=78.5]; Integrase core domain [PF00665.28, score=50.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=129, Expect=3e-29]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=131, Expect=5e-30]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=203, Expect=4e-56]} {RNA1509_38652} {RNA1310_115251} {RNA815_57269} |
| 6. | MligTC455_50937 | 13872 | 289 | Mlig455_002623 | Neo: - Age: logFC(26M/2M)=-0.326 Regeneration-downregulated R6: -1.088 Regeneration-depleted R6: -1.088 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_002623 {REF} {Length: 868} {TRANSSPLICED} {Pfam: Dynein light chain type 1 [PF01221.20, score=55.1]; EF hand [PF00036.34, score=40.9]; EF-hand domain [PF13405.8, score=30.7]; EF-hand domain pair [PF13499.8, score=29.7]; EF hand [PF13202.8, score=26.4]} {Smed: dd_Smed_v6_16347_0_1, dd_Smed_v6_16347_0_1, [RH, Score=123, Expect=4e-36]} {RNA1509_12924, RNA1509_1318} {RNA1310_17292, RNA1509_12924, RNA1509_1318} {RNA1509_12924, RNA1509_1318, RNA815_19041} |