Data search
Results for MligTC455_35279
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35279 | 1064 | 22.17 | Mlig455_044162 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.546/0.00008 |
RPL38 | Mlig455_044162 {REF} {Length: 1281} {TRANSSPLICED} {Pfam: Utp11 protein [PF03998.15, score=162.6]; Ribosomal L38e protein family [PF01781.20, score=108.2]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=114, Expect=1e-31]} {Mouse: ENSMUSG00000057322, Rpl38, ribosomal protein L38, [Score=117, Expect=8e-33]} {Dmel: FBgn0030063, CG1789, [RH, Score=98.6, Expect=6e-24]} {Celegans: WBGene00004452, rpl-38, 60S ribosomal protein L38, [Score=106, Expect=6e-29]} {Smed: dd_Smed_v6_236_0_1, dd_Smed_v6_236_0_1, [Score=111, Expect=7e-31]} {RNA1509_7321} {RNA1310_27990} {RNA815_14787} |
Cumulative graph for MligTC455_35279
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.123 | 4.811 | 0.27260 | 0.92335 | |
| RegionR2 | -0.696 | 4.811 | 0.08366 | 0.35526 | |
| RegionR3 | 0.234 | 4.811 | 0.44937 | 0.96131 | |
| RegionR4 | 1.546 | 4.811 | 0.00000 | 0.00008 | |
| RegionR5 | 0.759 | 4.811 | 0.00609 | 0.04024 | |
| RegionR6 | 0.062 | 4.811 | 0.84687 | 1.00000 | |
| RegionR7 | -0.283 | 4.811 | 0.52557 | 1.00000 | |
| RegionR8 | -0.5 | 4.811 | 0.39330 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.689 | 4.811 | 0.38342 | 1.00000 | |
| RegenerationR2 | 0.053 | 4.811 | 0.86498 | 1.00000 | |
| RegenerationR3 | -0.5 | 4.811 | 0.12854 | 0.55029 | |
| RegenerationR4 | -0.746 | 4.811 | 0.01880 | 0.21521 | |
| RegenerationR5 | 0.102 | 4.811 | 0.72331 | 0.96069 | |
| RegenerationR6 | 0.44 | 4.811 | 0.17886 | 0.51290 | |
| RegenerationBL | 0.122 | 4.811 | 0.76912 | 1.00000 | |
| RegenerationTP | 0.621 | 4.811 | 0.17418 | 0.60751 |
Genes with expression patterns similar to MligTC455_35279
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35279 | 1064 | 22.17 | Mlig455_044162 | Neo: - Age: Down-Up-Down Region-enriched R4: 1.546/0.00008 |
RPL38 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044162 {REF} {Length: 1281} {TRANSSPLICED} {Pfam: Utp11 protein [PF03998.15, score=162.6]; Ribosomal L38e protein family [PF01781.20, score=108.2]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=114, Expect=1e-31]} {Mouse: ENSMUSG00000057322, Rpl38, ribosomal protein L38, [Score=117, Expect=8e-33]} {Dmel: FBgn0030063, CG1789, [RH, Score=98.6, Expect=6e-24]} {Celegans: WBGene00004452, rpl-38, 60S ribosomal protein L38, [Score=106, Expect=6e-29]} {Smed: dd_Smed_v6_236_0_1, dd_Smed_v6_236_0_1, [Score=111, Expect=7e-31]} {RNA1509_7321} {RNA1310_27990} {RNA815_14787} |
| 2. | MligTC455_35277 | 1209 | 25.19 | Mlig455_041802 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=1.485 Region-enriched R4: 1.645/0.00001 |
RPL38 | 5.883 | 0.978 | 0.968 | 0.981 | 0.973 | 0.988 | 0.995 | Mlig455_041802 {REF} {Length: 2658} {TRANSSPLICED} {Pfam: Ribosomal L38e protein family [PF01781.20, score=109.7]; Utp11 protein [PF03998.15, score=106.5]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=113, Expect=4e-33]} {Mouse: ENSMUSG00000057322, Rpl38, ribosomal protein L38, [Score=116, Expect=3e-34]} {Dmel: FBgn0040007, RpL38, Ribosomal protein L38, [Score=102, Expect=8e-29]} {Celegans: WBGene00004452, rpl-38, 60S ribosomal protein L38, [Score=105, Expect=3e-30]} {Smed: dd_Smed_v6_236_0_1, dd_Smed_v6_236_0_1, [Score=110, Expect=2e-32]} {RNA1509_7321} {RNA1310_27990} {RNA815_14787} |
| 3. | MligTC455_35278 | 997 | 20.77 | Mlig455_044151 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 1.332/0.00972 |
RPL38 | 4.678 | 0.938 | 0.931 | 0.882 | - | 0.990 | 0.937 | Mlig455_044151 {REF} {Length: 1080} {TRANSSPLICED} {Pfam: Utp11 protein [PF03998.15, score=162.6]; Ribosomal L38e protein family [PF01781.20, score=108.2]} {Human: ENSG00000172809, RPL38, ribosomal protein L38, [RH, Score=114, Expect=1e-31]} {Mouse: ENSMUSG00000057322, Rpl38, ribosomal protein L38, [Score=117, Expect=8e-33]} {Dmel: FBgn0030063, CG1789, [RH, Score=98.6, Expect=6e-24]} {Celegans: WBGene00004452, rpl-38, 60S ribosomal protein L38, [Score=106, Expect=6e-29]} {Smed: dd_Smed_v6_236_0_1, dd_Smed_v6_236_0_1, [Score=111, Expect=7e-31]} {RNA1509_24745} {RNA1310_27990} {RNA815_14787} |
| 4. | MligTC455_50562 | 1196 | 24.92 | Mlig455_055278 | Neo: - Age: - Region-enriched R5: 1.643/0.00000 |
CERS2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_055278 {REF} {Length: 2593} {Pfam: TLC domain [PF03798.18, score=138.6]} {Human: ENSG00000143418, CERS2, ceramide synthase 2, [Score=228, Expect=3e-71]} {Mouse: ENSMUSG00000015714, Cers2, ceramide synthase 2, [Score=232, Expect=8e-73]} {Dmel: FBgn0040918, schlank, [Score=226, Expect=3e-70]} {Celegans: WBGene00002043, hyl-1, Ceramide synthase hyl-1, [Score=158, Expect=1e-45]} {Smed: dd_Smed_v6_4223_0_1, dd_Smed_v6_4223_0_1, [Score=230, Expect=8e-73]} {RNA1509_23977, RNA1509_32792, RNA1509_37201, RNA1509_5457} {RNA1310_7363.1, RNA1509_23977, RNA1509_32792, RNA1509_37201, RNA1509_5457} {RNA1509_23977, RNA1509_32792, RNA1509_37201, RNA1509_5457, RNA815_2329.1} |
Berezikov Lab - 2020-2021 © ERIBA