TomoSeq data search

Data search

Results for MligTC455_35318

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35318

432

9.01

Mlig455_002050, Mlig455_022483, Mlig455_028951, Mlig455_053176, Mlig455_053194, Mlig455_056860, Mlig455_056862, Mlig455_057046

Neo: -

Age: -

Mlig455_002050 {REF} {Length: 1849} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539}

Mlig455_022483 {REF} {Length: 801} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539}

Mlig455_028951 {REF} {Length: 404} {RNA1310_36097} {RNA815_32539}

Mlig455_053176 {REF} {Length: 1040} {NoTransDecoderORF} {RNA1509_55705} {RNA1310_49432.1} {RNA815_32539}

Mlig455_053194 {REF} {Length: 1040} {NoTransDecoderORF} {RNA1509_55705} {RNA1310_49432.1} {RNA815_32539}

Mlig455_056860 {REF} {Length: 239} {NoTransDecoderORF} {RNA1310_124800} {RNA815_47822}

Mlig455_056862 {REF} {Length: 966} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539}

Mlig455_057046 {REF} {Length: 1379} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539}

Cumulative graph for MligTC455_35318

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.569	3.728	0.99979	1.00000
RegionR2	1.055	3.728	0.49528	0.87629
RegionR3	-0.527	3.728	0.87542	1.00000
RegionR4	3.246	3.728	0.06991	0.24193
RegionR5	2.345	3.728	0.09726	0.29941
RegionR6	0.715	3.728	0.56409	1.00000
RegionR7	2.227	3.728	0.15096	0.72095
RegionR8	-4.493	3.728	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.108	3.728	1.00000	1.00000
RegenerationR2	1.403	3.728	0.31849	0.75678
RegenerationR3	4.142	3.728	0.01404	0.21721
RegenerationR4	2.083	3.728	0.20768	0.65471
RegenerationR5	1.705	3.728	0.24522	0.67833
RegenerationR6	2.181	3.728	0.15403	0.48007
RegenerationBL	-0.651	3.728	0.89718	1.00000
RegenerationTP	2.746	3.728	0.25525	0.70266

Genes with expression patterns similar to MligTC455_35318

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35318	432	9.01	Mlig455_002050, Mlig455_022483, Mlig455_028951, Mlig455_053176, Mlig455_053194, Mlig455_056860, Mlig455_056862, Mlig455_057046	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002050 {REF} {Length: 1849} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539} Mlig455_022483 {REF} {Length: 801} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539} Mlig455_028951 {REF} {Length: 404} {RNA1310_36097} {RNA815_32539} Mlig455_053176 {REF} {Length: 1040} {NoTransDecoderORF} {RNA1509_55705} {RNA1310_49432.1} {RNA815_32539} Mlig455_053194 {REF} {Length: 1040} {NoTransDecoderORF} {RNA1509_55705} {RNA1310_49432.1} {RNA815_32539} Mlig455_056860 {REF} {Length: 239} {NoTransDecoderORF} {RNA1310_124800} {RNA815_47822} Mlig455_056862 {REF} {Length: 966} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539} Mlig455_057046 {REF} {Length: 1379} {NoTransDecoderORF} {RNA1310_49432.1} {RNA815_32539}
2.	MligTC455_33097	312	6.49	Mlig455_015644	Neo: - Age: -	TTLL7	2.592	0.816	-	0.823	-	0.953	-	Mlig455_015644 {REF} {Length: 3057} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=237.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=28.0]; YheC/D like ATP-grasp [PF14398.8, score=25.7]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [RH, Score=471, Expect=5e-156]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [RH, Score=464, Expect=2e-150]} {Dmel: FBgn0039501, CG5987, [Score=281, Expect=3e-83]} {Celegans: WBGene00008331, ttll-5, Tubulin Tyrosine Ligase Like, [Score=195, Expect=1e-52]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=358, Expect=3e-110]} {RNA1509_21278, RNA1509_39450, RNA1509_53901} {RNA1310_5509, RNA1509_21278, RNA1509_39450, RNA1509_53901} {RNA1509_21278, RNA1509_39450, RNA1509_53901, RNA815_1654}
3.	MligTC455_52326	1067	22.23	Mlig455_034323, Mlig455_034379, Mlig455_043870	Neo: - Age: - Region-enriched R3: 1.200/0.00181 Region-enriched R4: 1.016/0.04518		1.804	-	-	-	0.853	-	0.951	Mlig455_034323 {REF} {Length: 385} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48035} {RNA1310_44138} {RNA815_31469} Mlig455_034379 {REF} {Length: 409} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38078, RNA1509_48035} {RNA1310_44138, RNA1509_38078, RNA1509_48035} {RNA1509_38078, RNA1509_48035, RNA815_31469} Mlig455_043870 {REF} {Length: 403} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38078} {RNA1310_44138} {RNA815_31469}
4.	MligTC455_47458	542	11.29	Mlig455_039325	Neo: - Age: logFC(26M/2M)=-0.279	LRRC71	1.69	-	-	0.729	-	0.961	-	Mlig455_039325 {REF} {Length: 2138} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=71.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.7]} {Human: ENSG00000160838, LRRC71, leucine rich repeat containing 71, [Score=184, Expect=4e-51]} {Mouse: ENSMUSG00000023084, Lrrc71, leucine rich repeat containing 71, [Score=181, Expect=3e-50]} {Smed: dd_Smed_v6_12043_0_2, dd_Smed_v6_12043_0_2, [RH, Score=225, Expect=3e-68]} {RNA1509_17632} {RNA1310_9823, RNA1509_17632} {RNA1509_17632, RNA815_14689.1}
5.	MligTC455_51857	598	12.47	Mlig455_024455	Neo: - Age: -	MDH1B	0.978	-	-	-	-	0.978	-	Mlig455_024455 {REF} {Length: 1886} {Pfam: lactate/malate dehydrogenase, alpha/beta C-terminal domain [PF02866.20, score=38.0]} {Human: ENSG00000138400, MDH1B, malate dehydrogenase 1B, [RH, Score=258, Expect=2e-79]} {Mouse: ENSMUSG00000025963, Mdh1b, malate dehydrogenase 1B, NAD (soluble), [RH, Score=238, Expect=3e-72]} {Celegans: WBGene00018491, mdh-1, Malate DeHydrogenase, [Score=75.9, Expect=8e-15]} {Smed: dd_Smed_v6_10200_0_1, dd_Smed_v6_10200_0_1, [Score=279, Expect=6e-87]} {RNA1509_21048} {RNA1310_31155} {RNA815_18662}
6.	MligTC455_38539	2265	47.19	Mlig455_060216, Mlig455_070478	Neo: - Age: - Region-enriched R4: 1.188/0.01489 Region-enriched R5: 1.081/0.00737		0.964	-	-	-	0.964	-	-	Mlig455_060216 {REF} {Length: 2555} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=54.4]} {RNA1509_37833} {RNA1310_15658.1, RNA1509_37833} {RNA1509_37833, RNA815_10669} Mlig455_070478 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: PQ loop repeat [PF04193.16, score=51.7]} {RNA1509_22974, RNA1509_41916, RNA1509_46618} {RNA1310_15658.1, RNA1509_22974, RNA1509_41916, RNA1509_46618} {RNA1509_22974, RNA1509_41916, RNA1509_46618, RNA815_10669}
7.	MligTC455_47234	19	0.39	Mlig455_051300	Neo: - Age: Down-Up-Down	SCNN1B	0.962	-	-	-	-	0.962	-	Mlig455_051300 {REF} {Length: 1753} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=169.2]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=55.8, Expect=1e-07]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=57.8, Expect=2e-08]} {Smed: dd_Smed_v6_12037_0_1, dd_Smed_v6_12037_0_1, [Score=85.9, Expect=1e-17]} {RNA1310_54586}
8.	MligTC455_13754	61	1.28	Mlig455_048263	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_048263 {REF} {Length: 655} {NoTransDecoderORF} {RNA1509_59684} {RNA1310_3196} {RNA815_45825}
9.	MligTC455_09325	11	0.23	Mlig455_047047	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_047047 {REF} {Length: 475} {Pfam: Family of unknown function (DUF5358) [PF17311.4, score=20.5]} {RNA1509_14471} {RNA1310_54312} {RNA815_28165.2}
10.	MligTC455_49315	516	10.75	Mlig455_070598	Neo: - Age: logFC(26M/2M)=-0.322	SLC24A3	0.959	-	-	-	-	0.959	-	Mlig455_070598 {REF} {Length: 3827} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=176.9]} {Human: ENSG00000185052, SLC24A3, solute carrier family 24 member 3, [RH, Score=427, Expect=9e-142]} {Mouse: ENSMUSG00000063873, Slc24a3, solute carrier family 24 (sodium/potassium/calcium exchanger), member 3, [RH, Score=423, Expect=5e-141]} {Dmel: FBgn0037238, CG1090, [Score=384, Expect=2e-125]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [RH, Score=315, Expect=3e-99]} {Smed: dd_Smed_v6_7121_0_1, dd_Smed_v6_7121_0_1, [Score=432, Expect=6e-146]} {RNA1509_8142} {RNA1310_7488, RNA1509_8142} {RNA1509_8142, RNA815_3083.1}
11.	MligTC455_53451	850	17.7	Mlig455_031966	Neo: - Age: logFC(26M/2M)=-0.407	IAH1	0.959	-	-	-	-	0.959	-	Mlig455_031966 {REF} {Length: 2159} {Pfam: GDSL-like Lipase/Acylhydrolase family [PF13472.8, score=85.2]; GDSL-like Lipase/Acylhydrolase [PF00657.24, score=36.0]} {Human: ENSG00000134330, IAH1, isoamyl acetate hydrolyzing esterase 1 (putative), [RH, Score=149, Expect=9e-44]} {Mouse: ENSMUSG00000062054, Iah1, isoamyl acetate-hydrolyzing esterase 1 homolog, [RH, Score=135, Expect=2e-38]} {Smed: dd_Smed_v6_6241_0_1, dd_Smed_v6_6241_0_1, [RH, Score=157, Expect=2e-47]} {RNA1509_15596, RNA1509_17158} {RNA1310_31040.1, RNA1509_15596} {RNA1509_15596, RNA815_22020}
12.	MligTC455_20031	42	0.88	Mlig455_047335	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_047335 {REF} {Length: 686} {RNA1509_37632} {RNA1310_58870} {RNA815_58496}
13.	MligTC455_40821	347	7.22	Mlig455_016792	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.666		0.956	-	-	-	-	-	0.956	Mlig455_016792 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=48.2]; short chain dehydrogenase [PF00106.27, score=38.4]} {Dmel: FBgn0030968, CG7322, [Score=52.4, Expect=3e-08]} {Celegans: WBGene00000984, dhs-21, L-xylulose reductase, [Score=51.6, Expect=4e-08]} {RNA1509_44109} {RNA1310_24446.1} {RNA815_13838}
14.	MligTC455_21933	104	2.17	Mlig455_033294	Neo: - Age: -	SLC22A6	0.953	-	-	-	-	0.953	-	Mlig455_033294 {REF} {Length: 4179} {Pfam: Sugar (and other) transporter [PF00083.26, score=70.8]; Major Facilitator Superfamily [PF07690.18, score=57.7]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=129, Expect=7e-32]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=120, Expect=7e-29]} {Dmel: FBgn0038407, CG6126, [Score=143, Expect=4e-37]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=124, Expect=1e-30]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=132, Expect=1e-33]} {RNA1509_33980, RNA1509_37698, RNA1509_53707} {RNA1310_11575, RNA1509_33980, RNA1509_37698, RNA1509_53707} {RNA1509_33980, RNA1509_37698, RNA1509_53707, RNA815_20135}
15.	MligTC455_06949	100	2.07	Mlig455_043277	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_043277 {REF} {Length: 1489} {TRANSSPLICED} {RNA1509_49118} {RNA1310_24738.1} {RNA815_3785.1}
16.	MligTC455_52158	2513	52.35	Mlig455_022825	Neo: - Age: Down-Up-Up Region-enriched R4: 1.661/0.02974 Region-enriched R3: 1.635/0.02881 Region-enriched R5: 1.518/0.01597	CALM3	0.952	-	-	-	-	-	0.952	Mlig455_022825 {REF} {Length: 1438} {Pfam: EF hand [PF00036.34, score=111.3]; EF-hand domain pair [PF13499.8, score=103.6]; EF-hand domain pair [PF13833.8, score=88.5]; EF hand [PF13202.8, score=87.3]; EF-hand domain [PF13405.8, score=76.4]; EF-hand domain [PF14658.8, score=35.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=34.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.0]; Dockerin type I domain [PF00404.20, score=27.9]; EF-hand domain [PF08976.13, score=20.6]; GYF domain 2 [PF14237.8, score=19.3]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=131, Expect=1e-39]; ENSG00000198668, CALM1, calmodulin 1, [Score=131, Expect=1e-39]; ENSG00000143933, CALM2, calmodulin 2, [Score=131, Expect=1e-39]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=131, Expect=1e-39]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=131, Expect=1e-39]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=131, Expect=1e-39]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=128, Expect=2e-38]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=128, Expect=2e-38]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=128, Expect=1e-38]} {RNA1509_11596, RNA1509_31225, RNA1509_4775, RNA1509_6227} {RNA1310_32140.1, RNA1509_11596, RNA1509_31225, RNA1509_6227} {RNA1509_11596, RNA1509_31225, RNA1509_6227, RNA815_3424.1}
17.	MligTC455_26546	67	1.4	Mlig455_017556	Neo: - Age: logFC(26M/2M)=1.225	CSPP1	0.951	-	-	0.951	-	-	-	Mlig455_017556 {REF} {Length: 3917} {TRANSSPLICED} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [Score=82.8, Expect=3e-15]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [Score=100, Expect=6e-21]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [Score=86.7, Expect=4e-17]} {RNA1509_7480} {RNA1310_2740.1} {RNA815_13668}
18.	MligTC455_52549	150	3.12	Mlig455_002138, Mlig455_002284	Neo: - Age: - Regeneration-depleted BL: -6.786 Regeneration-depleted TP: -4.939		0.951	-	-	-	-	0.951	-	Mlig455_002138 {REF} {Length: 4372} {Pfam: Innexin [PF00876.20, score=62.4]} {Smed: dd_Smed_v6_9861_0_1, dd_Smed_v6_9861_0_1, [Score=60.1, Expect=9e-10]} {RNA1509_36214} {RNA1310_17023} {RNA815_33132} Mlig455_002284 {REF} {Length: 2783} {Pfam: Innexin [PF00876.20, score=63.0]} {Smed: dd_Smed_v6_9861_0_1, dd_Smed_v6_9861_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_36214} {RNA1310_17023} {RNA815_33132}
19.	MligTC455_27626	5517	114.94	Mlig455_018931	Neo: - Age: Down-Down-Up Region-enriched R3: 1.591/0.03259	MATN2	0.95	-	-	-	-	-	0.950	Mlig455_018931 {REF} {Length: 2583} {Pfam: von Willebrand factor type A domain [PF00092.30, score=235.9]; von Willebrand factor type A domain [PF13519.8, score=103.0]; von Willebrand factor type A domain [PF13768.8, score=54.3]; VWA domain containing CoxE-like protein [PF05762.16, score=36.8]; Protein of unknown function (DUF1194) [PF06707.13, score=35.1]} {Human: ENSG00000132561, MATN2, matrilin 2, [Score=96.7, Expect=3e-20]} {Mouse: ENSMUSG00000040533, Matn1, matrilin 1, cartilage matrix protein, [Score=105, Expect=1e-23]} {Celegans: WBGene00003482, mua-3, Transmembrane cell adhesion receptor mua-3, [Score=82.0, Expect=8e-16]} {Smed: dd_Smed_v6_2674_0_1, dd_Smed_v6_2674_0_1, [Score=92.0, Expect=3e-19]} {RNA1509_21765, RNA1509_317, RNA1509_9118} {RNA1310_8996, RNA1509_21765, RNA1509_317, RNA1509_9118} {RNA1509_21765, RNA1509_317, RNA1509_9118, RNA815_2915.1}

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