TomoSeq data search

Data search

Results for MligTC455_35344

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35344	377	7.85	Mlig455_042842, Mlig455_045876	Neo: - Age: logFC(26M/2M)=-0.416		Mlig455_042842 {REF} {Length: 3324} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=78.2]; PPPDE putative peptidase domain [PF05903.16, score=21.9]} {RNA1509_16459} {RNA1310_7574.1} {RNA815_2727} Mlig455_045876 {REF} {Length: 4283} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.9]} {RNA1509_16459} {RNA1310_7574.2} {RNA815_2727}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_35344

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.431	3.336	0.72378	1.00000
RegionR2	-0.473	3.336	0.47308	0.85867
RegionR3	0.948	3.336	0.04323	0.36315
RegionR4	-0.244	3.336	0.67440	0.97014
RegionR5	-0.864	3.336	0.08308	0.26913
RegionR6	0.32	3.336	0.53415	1.00000
RegionR7	-0.59	3.336	0.44778	1.00000
RegionR8	0.471	3.336	0.57695	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.814	3.336	0.11958	0.84939
RegenerationR2	0.384	3.336	0.50396	0.87291
RegenerationR3	-0.371	3.336	0.50514	0.85901
RegenerationR4	0.405	3.336	0.49279	0.86583
RegenerationR5	0.847	3.336	0.14185	0.55567
RegenerationR6	0.667	3.336	0.23932	0.58681
RegenerationBL	0.854	3.336	0.20614	0.54820
RegenerationTP	1.101	3.336	0.12518	0.53552

Genes with expression patterns similar to MligTC455_35344

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35344	377	7.85	Mlig455_042842, Mlig455_045876	Neo: - Age: logFC(26M/2M)=-0.416		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042842 {REF} {Length: 3324} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=78.2]; PPPDE putative peptidase domain [PF05903.16, score=21.9]} {RNA1509_16459} {RNA1310_7574.1} {RNA815_2727} Mlig455_045876 {REF} {Length: 4283} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.9]} {RNA1509_16459} {RNA1310_7574.2} {RNA815_2727}
2.	MligTC455_49890	261	5.44	Mlig455_015855	Neo: - Age: -	SLC44A1	0.951	-	-	-	-	0.951	-	Mlig455_015855 {REF} {Length: 5232} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.0]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=261, Expect=3e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=9e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=260, Expect=6e-76]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=5e-84]} {RNA1509_16805, RNA1509_40153} {RNA1310_5849, RNA1509_16805, RNA1509_40153} {RNA1509_16805, RNA1509_40153, RNA815_2956.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35344

377

7.85

Mlig455_042842, Mlig455_045876

Neo: -

Age: logFC(26M/2M)=-0.416

1.000

Mlig455_045876 {REF} {Length: 4283} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=47.9]} {RNA1509_16459} {RNA1310_7574.2} {RNA815_2727}

MligTC455_49890

261

5.44

Mlig455_015855

Neo: -

Age: -

SLC44A1

0.951

Mlig455_015855 {REF} {Length: 5232} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.0]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=261, Expect=3e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=9e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=260, Expect=6e-76]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=5e-84]} {RNA1509_16805, RNA1509_40153} {RNA1310_5849, RNA1509_16805, RNA1509_40153} {RNA1509_16805, RNA1509_40153, RNA815_2956.1}