Data search
Results for MligTC455_35372
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35372 | 11 | 0.23 | Mlig455_016858 | Neo: - Age: Up-Down-Down |
GLRA2 | Mlig455_016858 {REF} {Length: 4342} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=300, Expect=2e-96]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=296, Expect=5e-95]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=293, Expect=1e-93]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=298, Expect=8e-96]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=297, Expect=1e-95]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=290, Expect=9e-93]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=8e-92]} {Dmel: FBgn0024963, GluClalpha, [Score=268, Expect=2e-84]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=236, Expect=4e-71]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=260, Expect=2e-81]} {RNA1509_47429} {RNA1310_14629.1} {RNA815_27491} |
Cumulative graph for MligTC455_35372
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.145 | 0.569 | 0.99998 | 1.00000 | |
| RegionR2 | 2.402 | 0.569 | 0.99995 | 1.00000 | |
| RegionR3 | 0.452 | 0.569 | 0.99995 | 1.00000 | |
| RegionR4 | -2.557 | 0.569 | 0.99984 | 1.00000 | |
| RegionR5 | -0.663 | 0.569 | 0.99990 | 1.00000 | |
| RegionR6 | -0.093 | 0.569 | 0.99994 | 1.00000 | |
| RegionR7 | 1.022 | 0.569 | 0.99998 | 1.00000 | |
| RegionR8 | 1.582 | 0.569 | 0.99999 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.007 | 0.569 | 0.99998 | 1.00000 | |
| RegenerationR2 | 1.211 | 0.569 | 0.99959 | 1.00000 | |
| RegenerationR3 | 1.865 | 0.569 | 0.99962 | 1.00000 | |
| RegenerationR4 | 2.084 | 0.569 | 0.99962 | 1.00000 | |
| RegenerationR5 | 0.797 | 0.569 | 0.99969 | 1.00000 | |
| RegenerationR6 | -0.566 | 0.569 | 0.99995 | 1.00000 | |
| RegenerationBL | -1.755 | 0.569 | 0.99993 | 1.00000 | |
| RegenerationTP | -1.236 | 0.569 | 0.99994 | 1.00000 |
Genes with expression patterns similar to MligTC455_35372
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35372 | 11 | 0.23 | Mlig455_016858 | Neo: - Age: Up-Down-Down |
GLRA2 | 1 | - | - | - | - | 1.000 | - | Mlig455_016858 {REF} {Length: 4342} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=120.2]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=300, Expect=2e-96]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=296, Expect=5e-95]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=293, Expect=1e-93]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=298, Expect=8e-96]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=297, Expect=1e-95]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=290, Expect=9e-93]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=287, Expect=8e-92]} {Dmel: FBgn0024963, GluClalpha, [Score=268, Expect=2e-84]} {Celegans: WBGene00001512, gab-1, Gamma-aminobutyric acid receptor subunit beta, [Score=236, Expect=4e-71]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=260, Expect=2e-81]} {RNA1509_47429} {RNA1310_14629.1} {RNA815_27491} |
| 2. | MligTC455_04227 | 22 | 0.45 | Mlig455_061453 | Neo: - Age: - |
0.976 | - | - | - | - | 0.976 | - | Mlig455_061453 {REF} {Length: 2038} {Pfam: Glycine rich protein [PF12810.9, score=24.7]} {RNA1509_28715} {RNA1310_109445} | |
| 3. | MligTC455_56292 | 12 | 0.25 | Mlig455_022844 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_022844 {REF} {Length: 403} {NoTransDecoderORF} | |
| 4. | MligTC455_28052 | 115 | 2.4 | Mlig455_031896, Mlig455_056076 | Neo: - Age: Up-Up-Down |
0.968 | - | - | - | - | 0.968 | - | Mlig455_031896 {REF} {Length: 3140} {TRANSSPLICED} {RNA1509_58475} {RNA1310_22436} {RNA815_11429} Mlig455_056076 {REF} {Length: 4211} {TRANSSPLICED} {RNA1509_58475} {RNA1310_12129} {RNA815_7897} |
|
| 5. | MligTC455_37395 | 18 | 0.38 | Mlig455_071006 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_071006 {REF} {Length: 898} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=31.2]} {RNA1310_17986} {RNA815_61383} | |
| 6. | MligTC455_10443 | 17 | 0.36 | Mlig455_016163 | Neo: - Age: Up-Down-Up |
0.966 | - | - | - | - | 0.966 | - | Mlig455_016163 {REF} {Length: 2701} {RNA1310_106588} | |
| 7. | MligTC455_20101 | 13 | 0.26 | Mlig455_044305 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_044305 {REF} {Length: 403} {NoTransDecoderORF} | |
| 8. | MligTC455_10397 | 13 | 0.28 | Mlig455_030034 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_030034 {REF} {Length: 2324} {RNA1310_98311} {RNA815_5370} |
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