TomoSeq data search

Data search

Results for MligTC455_35466

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35466	955	19.89	Mlig455_047589	Neo: - Age: Down-Up-Down	IRX2	Mlig455_047589 {REF} {Length: 1652} {Pfam: Homeobox KN domain [PF05920.13, score=57.3]; Homeodomain [PF00046.31, score=33.0]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.4, Expect=2e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.4, Expect=2e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=77.0, Expect=2e-15]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.6, Expect=2e-15]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=74.3, Expect=2e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=1e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.8, Expect=8e-16]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.4, Expect=1e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=2e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=1e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.6, Expect=1e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.0, Expect=2e-18]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_35466

955

19.89

Mlig455_047589

Neo: -

Age: Down-Up-Down

IRX2

Mlig455_047589 {REF} {Length: 1652} {Pfam: Homeobox KN domain [PF05920.13, score=57.3]; Homeodomain [PF00046.31, score=33.0]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.4, Expect=2e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.4, Expect=2e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=77.0, Expect=2e-15]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.6, Expect=2e-15]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=74.3, Expect=2e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=1e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.8, Expect=8e-16]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.4, Expect=1e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=2e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=1e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.6, Expect=1e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.0, Expect=2e-18]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}

Cumulative graph for MligTC455_35466

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.387	4.529	0.30570	0.95476
RegionR2	0.051	4.529	0.91876	1.00000
RegionR3	0.906	4.529	0.02965	0.29518
RegionR4	1.302	4.529	0.00823	0.05275
RegionR5	0.654	4.529	0.10824	0.32204
RegionR6	0.905	4.529	0.03111	0.32678
RegionR7	-0.604	4.529	0.33246	0.96732
RegionR8	-1.827	4.529	0.04751	0.42746

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.393	4.529	0.38835	1.00000
RegenerationR2	-0.003	4.529	0.99552	1.00000
RegenerationR3	-0.075	4.529	0.86306	1.00000
RegenerationR4	-0.033	4.529	0.94086	1.00000
RegenerationR5	0.168	4.529	0.69813	0.95086
RegenerationR6	0.098	4.529	0.82692	0.98947
RegenerationBL	1.165	4.529	0.02942	0.19091
RegenerationTP	0.883	4.529	0.21072	0.65313

Genes with expression patterns similar to MligTC455_35466

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35466	955	19.89	Mlig455_047589	Neo: - Age: Down-Up-Down	IRX2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047589 {REF} {Length: 1652} {Pfam: Homeobox KN domain [PF05920.13, score=57.3]; Homeodomain [PF00046.31, score=33.0]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.4, Expect=2e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.4, Expect=2e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=77.0, Expect=2e-15]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.6, Expect=2e-15]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=74.3, Expect=2e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=1e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.8, Expect=8e-16]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.4, Expect=1e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=2e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=1e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.6, Expect=1e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.0, Expect=2e-18]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}
2.	MligTC455_19730	1311	27.32	Mlig455_019073, Mlig455_064294, Mlig455_064330	Neo: - Age: logFC(26M/2M)=0.583 Region-enriched R6: 2.340/0.00463 Region-enriched R4: 2.180/0.01399	HMCN1	1.71	-	-	0.754	-	-	0.956	Mlig455_019073 {REF} {Length: 3181} {Pfam: Fibronectin type II domain [PF00040.21, score=42.4]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=107, Expect=4e-23]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=68.2, Expect=2e-11]} {Celegans: WBGene00011880, T21B6.3, [Score=69.3, Expect=8e-12]} {Smed: dd_Smed_v6_14729_0_1, dd_Smed_v6_14729_0_1, [RH, Score=124, Expect=7e-30]} {RNA1509_13821, RNA1509_60078} {RNA1310_5836, RNA1509_60078} {RNA1509_60078, RNA815_1177} Mlig455_064294 {REF} {Length: 3119} {Pfam: Fibronectin type II domain [PF00040.21, score=39.3]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=95.5, Expect=3e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=95.9, Expect=2e-19]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=69.7, Expect=9e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=70.9, Expect=3e-12]} {Smed: dd_Smed_v6_14729_0_1, dd_Smed_v6_14729_0_1, [RH, Score=120, Expect=1e-28]} {RNA1509_13821} {RNA1310_5836} {RNA815_1177} Mlig455_064330 {REF} {Length: 3107} {Pfam: Fibronectin type II domain [PF00040.21, score=42.2]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=94.4, Expect=7e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=94.7, Expect=3e-19]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=69.7, Expect=9e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=70.9, Expect=3e-12]} {Smed: dd_Smed_v6_14729_0_1, dd_Smed_v6_14729_0_1, [RH, Score=121, Expect=5e-29]} {RNA1509_13821} {RNA1310_5836, RNA1509_13821} {RNA1509_13821, RNA815_1177}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35466

955

19.89

Mlig455_047589

Neo: -

Age: Down-Up-Down

IRX2

1.000

MligTC455_19730

1311

27.32

Mlig455_019073, Mlig455_064294, Mlig455_064330

Neo: -

Age: logFC(26M/2M)=0.583

Region-enriched R6: 2.340/0.00463
Region-enriched R4: 2.180/0.01399

HMCN1

1.71

0.754

0.956

Mlig455_019073 {REF} {Length: 3181} {Pfam: Fibronectin type II domain [PF00040.21, score=42.4]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=97.1, Expect=1e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=107, Expect=4e-23]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=68.2, Expect=2e-11]} {Celegans: WBGene00011880, T21B6.3, [Score=69.3, Expect=8e-12]} {Smed: dd_Smed_v6_14729_0_1, dd_Smed_v6_14729_0_1, [RH, Score=124, Expect=7e-30]} {RNA1509_13821, RNA1509_60078} {RNA1310_5836, RNA1509_60078} {RNA1509_60078, RNA815_1177}

Mlig455_064294 {REF} {Length: 3119} {Pfam: Fibronectin type II domain [PF00040.21, score=39.3]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=95.5, Expect=3e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=95.9, Expect=2e-19]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=69.7, Expect=9e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=70.9, Expect=3e-12]} {Smed: dd_Smed_v6_14729_0_1, dd_Smed_v6_14729_0_1, [RH, Score=120, Expect=1e-28]} {RNA1509_13821} {RNA1310_5836} {RNA815_1177}

Mlig455_064330 {REF} {Length: 3107} {Pfam: Fibronectin type II domain [PF00040.21, score=42.2]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=94.4, Expect=7e-19]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=94.7, Expect=3e-19]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [Score=69.7, Expect=9e-12]} {Celegans: WBGene00011880, T21B6.3, [Score=70.9, Expect=3e-12]} {Smed: dd_Smed_v6_14729_0_1, dd_Smed_v6_14729_0_1, [RH, Score=121, Expect=5e-29]} {RNA1509_13821} {RNA1310_5836, RNA1509_13821} {RNA1509_13821, RNA815_1177}