TomoSeq data search

Data search

Results for MligTC455_35579

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35579	190	3.96	Mlig455_008359	Neo: - Age: -		Mlig455_008359 {REF} {Length: 4092} {TRANSSPLICED} {RNA1509_15404, RNA1509_17864, RNA1509_54389, RNA1509_58125, RNA1509_7982} {RNA1310_1516.1, RNA1509_15404, RNA1509_17864, RNA1509_54389, RNA1509_58125, RNA1509_7982} {RNA1509_15404, RNA1509_17864, RNA1509_54389, RNA1509_58125, RNA1509_7982, RNA815_1066.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_35579

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.891	2.551	0.15653	0.77498
RegionR2	0.649	2.551	0.53288	0.90399
RegionR3	1.357	2.551	0.10226	0.55983
RegionR4	1.375	2.551	0.11582	0.33903
RegionR5	1.146	2.551	0.16789	0.43496
RegionR6	0.309	2.551	0.72674	1.00000
RegionR7	1.377	2.551	0.18854	0.79163
RegionR8	-0.322	2.551	0.93620	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.363	2.551	0.99998	1.00000
RegenerationR2	-0.629	2.551	0.26256	0.70945
RegenerationR3	-0.481	2.551	0.39885	0.80200
RegenerationR4	-0.108	2.551	0.84940	1.00000
RegenerationR5	0.48	2.551	0.34480	0.76054
RegenerationR6	0.567	2.551	0.39429	0.73324
RegenerationBL	0.397	2.551	0.63115	0.97223
RegenerationTP	0.699	2.551	0.45303	0.86925

Genes with expression patterns similar to MligTC455_35579

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35579	190	3.96	Mlig455_008359	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008359 {REF} {Length: 4092} {TRANSSPLICED} {RNA1509_15404, RNA1509_17864, RNA1509_54389, RNA1509_58125, RNA1509_7982} {RNA1310_1516.1, RNA1509_15404, RNA1509_17864, RNA1509_54389, RNA1509_58125, RNA1509_7982} {RNA1509_15404, RNA1509_17864, RNA1509_54389, RNA1509_58125, RNA1509_7982, RNA815_1066.1}
2.	MligTC455_49225	236	4.91	Mlig455_059257	Neo: - Age: Up-Down-Up	VPS41	0.967	-	-	-	-	-	0.967	Mlig455_059257 {REF} {Length: 5244} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35579

190

3.96

Mlig455_008359

Neo: -

Age: -

1.000

MligTC455_49225

236

4.91

Mlig455_059257

Neo: -

Age: Up-Down-Up

VPS41

0.967

Mlig455_059257 {REF} {Length: 5244} {Pfam: Region in Clathrin and VPS [PF00637.22, score=59.8]; zinc-RING finger domain [PF14634.8, score=22.0]} {Human: ENSG00000006715, VPS41, VPS41, HOPS complex subunit, [RH, Score=464, Expect=5e-150]} {Mouse: ENSMUSG00000041236, Vps41, VPS41 HOPS complex subunit, [RH, Score=459, Expect=3e-148]} {Dmel: FBgn0002566, lt, light, [RH, Score=401, Expect=2e-126]} {Celegans: WBGene00017974, vps-41, Vacuolar protein sorting-associated protein 41 homolog, [RH, Score=303, Expect=2e-89]} {Smed: dd_Smed_v6_3481_0_1, dd_Smed_v6_3481_0_1, [RH, Score=390, Expect=7e-122]} {RNA1509_34132} {RNA1310_6719} {RNA815_4867}