Data search
Results for MligTC455_35595
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35595 | 235 | 4.90 | Mlig455_063930 | Neo: - Age: logFC(26M/2M)=0.555 |
HNRNPC | Mlig455_063930 {REF} {Length: 1766} {TRANSSPLICED} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [Score=48.5, Expect=4e-07]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [Score=47.8, Expect=3e-07]} {RNA1509_10281} {RNA1310_12537.1} {RNA815_24622} |
Cumulative graph for MligTC455_35595
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.12 | 2.832 | 0.12315 | 0.71700 | |
| RegionR2 | -0.476 | 2.832 | 0.95307 | 1.00000 | |
| RegionR3 | 1.097 | 2.832 | 0.17073 | 0.69658 | |
| RegionR4 | 2.092 | 2.832 | 0.01042 | 0.06300 | |
| RegionR5 | 1.358 | 2.832 | 0.05956 | 0.21232 | |
| RegionR6 | 1.287 | 2.832 | 0.09958 | 0.57933 | |
| RegionR7 | -0.025 | 2.832 | 0.86451 | 1.00000 | |
| RegionR8 | 0.787 | 2.832 | 0.47347 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.219 | 2.832 | 0.99998 | 1.00000 | |
| RegenerationR2 | 0.174 | 2.832 | 0.76258 | 0.97743 | |
| RegenerationR3 | -0.522 | 2.832 | 0.36084 | 0.77735 | |
| RegenerationR4 | -0.124 | 2.832 | 0.83140 | 0.99770 | |
| RegenerationR5 | 0.232 | 2.832 | 0.65134 | 0.93294 | |
| RegenerationR6 | 0.092 | 2.832 | 0.87406 | 1.00000 | |
| RegenerationBL | -0.049 | 2.832 | 0.94225 | 1.00000 | |
| RegenerationTP | -0.048 | 2.832 | 0.95082 | 1.00000 |
Genes with expression patterns similar to MligTC455_35595
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35595 | 235 | 4.9 | Mlig455_063930 | Neo: - Age: logFC(26M/2M)=0.555 |
HNRNPC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_063930 {REF} {Length: 1766} {TRANSSPLICED} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [Score=48.5, Expect=4e-07]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [Score=47.8, Expect=3e-07]} {RNA1509_10281} {RNA1310_12537.1} {RNA815_24622} |
| 2. | MligTC455_27912 | 213 | 4.45 | Mlig455_046695 | Neo: - Age: - Region-enriched R5: 2.074/0.00238 |
1.771 | - | - | - | 0.801 | - | 0.970 | Mlig455_046695 {REF} {Length: 5091} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=50.5]; Myb-like DNA-binding domain [PF13921.8, score=37.9]} {RNA1509_12469, RNA1509_59513} {RNA1310_2585, RNA1509_12469, RNA1509_59513} {RNA1509_12469, RNA1509_59513, RNA815_1912} | |
| 3. | MligTC455_34507 | 122 | 2.55 | Mlig455_056674 | Neo: - Age: - |
SLBP | 0.98 | - | - | - | - | - | 0.980 | Mlig455_056674 {REF} {Length: 2076} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.7]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=86.7, Expect=4e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=86.3, Expect=1e-18]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=1e-15]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=67.8, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=100, Expect=4e-24]} {RNA1509_9558} {RNA1310_22526.2, RNA1509_9558} {RNA1509_9558, RNA815_16079} |
| 4. | MligTC455_44776 | 255 | 5.31 | Mlig455_053558 | Neo: - Age: Down-Down-Up Region-enriched R4: 2.027/0.00698 |
SPART | 0.961 | - | - | - | - | 0.961 | - | Mlig455_053558 {REF} {Length: 3047} {TRANSSPLICED} {Pfam: Senescence-associated protein [PF06911.14, score=59.6]} {Human: ENSG00000133104, SPART, spartin, [RH, Score=67.8, Expect=2e-11]} {Mouse: ENSMUSG00000036580, Spg20, spastic paraplegia 20, spartin (Troyer syndrome) homolog (human), [RH, Score=110, Expect=3e-25]} {RNA1509_10450, RNA1509_38779, RNA1509_45882} {RNA1310_9098, RNA1509_38779, RNA1509_45882} {RNA1509_38779, RNA1509_45882, RNA815_5367} |
| 5. | MligTC455_52598 | 22 | 0.47 | Mlig455_047827 | Neo: - Age: - Region-enriched R4: 4.668/0.00914 |
ADRA1A | 0.955 | - | - | 0.955 | - | - | - | Mlig455_047827 {REF} {Length: 1991} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=100.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=29.1]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=26.2]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=77.8, Expect=9e-15]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=78.6, Expect=4e-15]; ENSMUSG00000045875, Adra1a, adrenergic receptor, alpha 1a, [Score=75.5, Expect=3e-14]} {Dmel: FBgn0025631, moody, [Score=67.8, Expect=9e-12]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.2, Expect=7e-10]} {Smed: dd_Smed_v6_15479_0_1, dd_Smed_v6_15479_0_1, [Score=80.9, Expect=2e-16]} {RNA1310_11537} {RNA815_15213} |
| 6. | MligTC455_11507 | 952 | 19.84 | Mlig455_015077 | Neo: - Age: logFC(26M/2M)=0.443 Region-enriched R5: 1.508/0.00086 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_015077 {REF} {Length: 363} {TRANSSPLICED} {RNA1509_35009} {RNA1310_22802} {RNA815_10583.1} | |
| 7. | MligTC455_41433 | 747 | 15.57 | Mlig455_034788 | Neo: - Age: logFC(26M/2M)=0.306 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_034788 {REF} {Length: 2395} {TRANSSPLICED} {RNA1509_34318, RNA1509_43191, RNA1509_49378} {RNA1310_26849.1, RNA1509_34318, RNA1509_49378} {RNA1509_34318, RNA1509_49378, RNA815_11952} |
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