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Results for MligTC455_35605

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35605 4 0.08 Mlig455_028123

Neo: Irradiation

Age: -

 GRIK2 Mlig455_028123 {REF} {Length: 4365} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=307.0]; Ligand-gated ion channel [PF00060.28, score=161.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=101.0]; Receptor family ligand binding region [PF01094.30, score=86.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=71.7]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=478, Expect=2e-149]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=472, Expect=3e-146]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=468, Expect=5e-145]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=476, Expect=3e-148]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=472, Expect=2e-146]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=463, Expect=1e-143]} {Dmel: FBgn0039927, CG11155, [Score=485, Expect=7e-152]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=359, Expect=7e-107]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=431, Expect=2e-131]} {RNA1509_22809} {RNA1310_11160} {RNA815_7458}

Cumulative graph for MligTC455_35605

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_35605

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35605 4 0.08 Mlig455_028123

Neo: Irradiation

Age: -

 GRIK2 1 - - - 1.000 - - Mlig455_028123 {REF} {Length: 4365} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=307.0]; Ligand-gated ion channel [PF00060.28, score=161.8]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=101.0]; Receptor family ligand binding region [PF01094.30, score=86.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=71.7]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=478, Expect=2e-149]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=472, Expect=3e-146]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=468, Expect=5e-145]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=476, Expect=3e-148]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=472, Expect=2e-146]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=463, Expect=1e-143]} {Dmel: FBgn0039927, CG11155, [Score=485, Expect=7e-152]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=359, Expect=7e-107]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=431, Expect=2e-131]} {RNA1509_22809} {RNA1310_11160} {RNA815_7458}
2. MligTC455_35672 31 0.65 Mlig455_053915, Mlig455_060558

Neo: Germline

Age: -

Region-enriched R4: 3.950/0.00244

 0.973 - - - 0.973 - -

Mlig455_053915 {REF} {Length: 1453} {RNA1509_18097} {RNA1310_135722} {RNA815_35310}

Mlig455_060558 {REF} {Length: 1361} {RNA1509_18097} {RNA1310_135722} {RNA815_35310}
3. MligTC455_19993 205 4.27 Mlig455_059684

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.259

 KLHL10 0.969 - - - 0.969 - - Mlig455_059684 {REF} {Length: 3178} {Pfam: Kelch motif [PF01344.27, score=49.0]; BTB And C-terminal Kelch [PF07707.17, score=40.4]; Kelch motif [PF07646.17, score=24.8]; BTB/POZ domain [PF00651.33, score=19.0]} {Human: ENSG00000161594, KLHL10, kelch like family member 10, [Score=68.2, Expect=3e-11]; ENSG00000114796, KLHL24, kelch like family member 24, [Score=67.4, Expect=5e-11]} {Mouse: ENSMUSG00000044938, Klhl31, kelch-like 31, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0001301, kel, kelch, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=54.3, Expect=1e-07]} {RNA1509_22536} {RNA1310_7097} {RNA815_20881}
4. MligTC455_51868 2403 50.07 Mlig455_023254, Mlig455_023331

Neo: -

Age: Up-Down-Up

 FRMD4B 0.965 - - - 0.965 - -

Mlig455_023254 {REF} {Length: 7836} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=32.4]; FERM central domain [PF00373.20, score=25.3]} {Human: ENSG00000114541, FRMD4B, FERM domain containing 4B, [Score=75.9, Expect=3e-13]} {Mouse: ENSMUSG00000030064, Frmd4b, FERM domain containing 4B, [Score=72.4, Expect=2e-12]; ENSMUSG00000026657, Frmd4a, FERM domain containing 4A, [Score=70.5, Expect=9e-12]} {Celegans: WBGene00008555, F07C6.4, [RH, Score=57.8, Expect=4e-08]} {RNA1509_24428, RNA1509_49264} {RNA1310_3371.2, RNA1509_24428, RNA1509_49264} {RNA1509_24428, RNA1509_49264, RNA815_12869}

Mlig455_023331 {REF} {Length: 4481} {RNA1509_48550} {RNA1310_3371.1, RNA1509_48550} {RNA1509_48550, RNA815_19393}
5. MligTC455_31938 131 2.74 Mlig455_041047

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_041047 {REF} {Length: 1376} {RNA1509_52877} {RNA1310_44065.2} {RNA815_31243}

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