Data search
Results for MligTC455_35606
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35606 | 4 | 0.09 | Mlig455_028289 | Neo: Irradiation |
GRIK2 | Mlig455_028289 {REF} {Length: 4359} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=308.1]; Ligand-gated ion channel [PF00060.28, score=163.2]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=101.0]; Receptor family ligand binding region [PF01094.30, score=86.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=71.7]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=481, Expect=2e-150]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=476, Expect=9e-148]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=469, Expect=9e-146]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=478, Expect=3e-149]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=476, Expect=5e-148]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=465, Expect=2e-144]} {Dmel: FBgn0039927, CG11155, [Score=486, Expect=3e-152]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=360, Expect=4e-107]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=432, Expect=9e-132]} {RNA1509_22809} {RNA1310_11160} {RNA815_7458} |
Cumulative graph for MligTC455_35606
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_35606
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35606 | 4 | 0.09 | Mlig455_028289 | Neo: Irradiation |
GRIK2 | 1 | - | - | - | 1.000 | - | - | Mlig455_028289 {REF} {Length: 4359} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=308.1]; Ligand-gated ion channel [PF00060.28, score=163.2]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=101.0]; Receptor family ligand binding region [PF01094.30, score=86.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=71.7]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=481, Expect=2e-150]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=476, Expect=9e-148]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=469, Expect=9e-146]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=478, Expect=3e-149]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=476, Expect=5e-148]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=465, Expect=2e-144]} {Dmel: FBgn0039927, CG11155, [Score=486, Expect=3e-152]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=360, Expect=4e-107]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [Score=432, Expect=9e-132]} {RNA1509_22809} {RNA1310_11160} {RNA815_7458} |
| 2. | MligTC455_24457 | 166 | 3.47 | Mlig455_062455 | Neo: Germline Age: Up-Down-Down, logFC(26M/2M)=-0.483 Region-specific R4: 5.934 Region-enriched R4: 3.452/0.00087 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_062455 {REF} {Length: 2941} {RNA1509_34362} {RNA1310_23548, RNA1509_34362} {RNA1509_34362, RNA815_9843} |
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