Data search
Results for MligTC455_35659
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35659 | 1167 | 24.32 | Mlig455_043960, Mlig455_044041 | Neo: - Age: Up-Down-Up |
MDN1 | Mlig455_043960 {REF} {Length: 11215} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=50.2]; Midasin AAA lid domain [PF17867.3, score=38.3]; Tubulin binding cofactor A [PF02970.18, score=22.9]; von Willebrand factor type A domain [PF13519.8, score=20.1]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [Score=333, Expect=3e-90]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [Score=319, Expect=2e-86]} {Dmel: FBgn0033661, CG13185, [Score=343, Expect=1e-93]} {Celegans: WBGene00018898, F55F10.1, Midasin, [RH, Score=217, Expect=6e-56]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=256, Expect=1e-67]} {RNA1509_16330} {RNA1310_154} {RNA815_8665} Mlig455_044041 {REF} {Length: 11122} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=114.4]; Midasin AAA lid domain [PF17867.3, score=50.0]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=37.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=32.5]; von Willebrand factor type A domain [PF13519.8, score=20.7]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [Score=503, Expect=5e-142]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [Score=503, Expect=7e-142]} {Dmel: FBgn0033661, CG13185, [Score=354, Expect=5e-97]} {Celegans: WBGene00018898, F55F10.1, Midasin, [Score=363, Expect=7e-100]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=360, Expect=4e-99]} {RNA1509_3216, RNA1509_34718} {RNA1310_154, RNA1509_34718} {RNA1509_34718, RNA815_8665} |
Cumulative graph for MligTC455_35659
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.491 | 4.923 | 0.10625 | 0.68338 | |
| RegionR2 | 0.998 | 4.923 | 0.01168 | 0.11100 | |
| RegionR3 | 0.367 | 4.923 | 0.24012 | 0.78147 | |
| RegionR4 | -0.522 | 4.923 | 0.14298 | 0.38745 | |
| RegionR5 | 0.416 | 4.923 | 0.13223 | 0.37025 | |
| RegionR6 | 0.446 | 4.923 | 0.16611 | 0.72114 | |
| RegionR7 | -0.733 | 4.923 | 0.13919 | 0.69876 | |
| RegionR8 | 0.518 | 4.923 | 0.31798 | 0.95104 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.179 | 4.923 | 0.90911 | 1.00000 | |
| RegenerationR2 | 0.05 | 4.923 | 0.87119 | 1.00000 | |
| RegenerationR3 | 0.727 | 4.923 | 0.03406 | 0.32774 | |
| RegenerationR4 | 0.989 | 4.923 | 0.00403 | 0.08709 | |
| RegenerationR5 | 0.515 | 4.923 | 0.09714 | 0.47654 | |
| RegenerationR6 | 0.796 | 4.923 | 0.01627 | 0.15763 | |
| RegenerationBL | 0.472 | 4.923 | 0.27705 | 0.63736 | |
| RegenerationTP | 0.136 | 4.923 | 0.78484 | 1.00000 |
Genes with expression patterns similar to MligTC455_35659
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35659 | 1167 | 24.32 | Mlig455_043960, Mlig455_044041 | Neo: - Age: Up-Down-Up |
MDN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_043960 {REF} {Length: 11215} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=50.2]; Midasin AAA lid domain [PF17867.3, score=38.3]; Tubulin binding cofactor A [PF02970.18, score=22.9]; von Willebrand factor type A domain [PF13519.8, score=20.1]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [Score=333, Expect=3e-90]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [Score=319, Expect=2e-86]} {Dmel: FBgn0033661, CG13185, [Score=343, Expect=1e-93]} {Celegans: WBGene00018898, F55F10.1, Midasin, [RH, Score=217, Expect=6e-56]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=256, Expect=1e-67]} {RNA1509_16330} {RNA1310_154} {RNA815_8665} Mlig455_044041 {REF} {Length: 11122} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=114.4]; Midasin AAA lid domain [PF17867.3, score=50.0]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=37.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=32.5]; von Willebrand factor type A domain [PF13519.8, score=20.7]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [Score=503, Expect=5e-142]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [Score=503, Expect=7e-142]} {Dmel: FBgn0033661, CG13185, [Score=354, Expect=5e-97]} {Celegans: WBGene00018898, F55F10.1, Midasin, [Score=363, Expect=7e-100]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=360, Expect=4e-99]} {RNA1509_3216, RNA1509_34718} {RNA1310_154, RNA1509_34718} {RNA1509_34718, RNA815_8665} |
| 2. | MligTC455_35658 | 668 | 13.91 | Mlig455_043971 | Neo: Int S/G2/M Age: Up-Down-Down |
MDN1 | 5.763 | 0.843 | 0.979 | 0.980 | 0.983 | 0.992 | 0.986 | Mlig455_043971 {REF} {Length: 15304} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=397.0]; Midasin AAA lid domain [PF17867.3, score=130.9]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=108.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=103.6]; AAA ATPase domain [PF13191.8, score=87.8]; P-loop containing dynein motor region [PF12775.9, score=72.0]; AAA domain [PF13401.8, score=71.4]; Midasin AAA lid domain [PF17865.3, score=70.7]; AAA domain [PF13238.8, score=60.1]; ABC transporter [PF00005.29, score=53.1]; Sigma-54 interaction domain [PF14532.8, score=52.9]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=52.6]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=44.8]; AAA domain [PF13173.8, score=42.7]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=40.3]; RNA helicase [PF00910.24, score=39.9]; NACHT domain [PF05729.14, score=38.5]; AAA domain [PF13521.8, score=37.9]; Sigma-54 interaction domain [PF00158.28, score=36.7]; Protein of unknown function (DUF815) [PF05673.15, score=36.4]; RsgA GTPase [PF03193.18, score=35.0]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=35.0]; Rad17 P-loop domain [PF03215.17, score=33.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=30.0]; AAA domain [PF13671.8, score=29.7]; P-loop containing region of AAA domain [PF13555.8, score=27.5]; 50S ribosome-binding GTPase [PF01926.25, score=26.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; ATPase domain predominantly from Archaea [PF01637.20, score=25.2]; Magnesium chelatase, subunit ChlI [PF01078.23, score=25.0]; AAA domain [PF13481.8, score=24.5]; Deoxynucleoside kinase [PF01712.21, score=23.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=21.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=21.8]; Chloramphenicol phosphotransferase-like protein [PF07931.14, score=21.0]; von Willebrand factor type A domain [PF13519.8, score=19.5]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.8]; IstB-like ATP binding protein [PF01695.19, score=18.5]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [RH, Score=1631, Expect=0.0]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [RH, Score=1636, Expect=0.0]} {Dmel: FBgn0033661, CG13185, [RH, Score=1326, Expect=0.0]} {Celegans: WBGene00018898, F55F10.1, Midasin, [RH, Score=1130, Expect=0.0]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [RH, Score=899, Expect=0.0]} {RNA1509_16330, RNA1509_3216, RNA1509_44013, RNA1509_48308} {RNA1310_154, RNA1509_16330, RNA1509_44013, RNA1509_48308} {RNA1509_16330, RNA1509_44013, RNA1509_48308, RNA815_8665} |
| 3. | MligTC455_16784 | 1482 | 30.87 | Mlig455_045891 | Neo: Neoblast Age: - Regeneration-enriched R6: 1.382 |
TIMM10 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_045891 {REF} {Length: 2072} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=69.3]} {Human: ENSG00000134809, TIMM10, translocase of inner mitochondrial membrane 10, [RH, Score=88.2, Expect=1e-23]} {Mouse: ENSMUSG00000027076, Timm10, translocase of inner mitochondrial membrane 10, [RH, Score=88.2, Expect=7e-24]} {Dmel: FBgn0027360, Tim10, Translocase of inner membrane 10, [RH, Score=90.5, Expect=6e-25]} {Celegans: WBGene00006573, tin-10, Mitochondrial import inner membrane translocase subunit Tim10, [RH, Score=85.1, Expect=7e-23]} {Smed: dd_Smed_v6_1710_0_1, dd_Smed_v6_1710_0_1, [RH, Score=87.8, Expect=6e-24]} {RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821} {RNA1310_45745, RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821} {RNA1509_15328, RNA1509_21842, RNA1509_24688, RNA1509_29092, RNA1509_29987, RNA1509_42814, RNA1509_46821, RNA815_24837.1} |
| 4. | MligTC455_48222 | 885 | 18.44 | Mlig455_031424, Mlig455_056469 | Neo: - Age: Down-Up-Up |
GFER | 0.968 | - | - | - | 0.968 | - | - | Mlig455_031424 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.4]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=147, Expect=2e-44]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=134, Expect=6e-39]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=1e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=160, Expect=8e-51]} {RNA1509_41230} {RNA1310_32417.1} {RNA815_24929} Mlig455_056469 {REF} {Length: 1066} {TRANSSPLICED} {Pfam: Erv1 / Alr family [PF04777.15, score=104.3]} {Human: ENSG00000127554, GFER, growth factor, augmenter of liver regeneration, [RH, Score=149, Expect=5e-45]} {Mouse: ENSMUSG00000040888, Gfer, growth factor, augmenter of liver regeneration, [RH, Score=139, Expect=2e-41]} {Dmel: FBgn0031068, Alr, Augmenter of liver regeneration, [RH, Score=132, Expect=5e-38]} {Celegans: WBGene00018955, F56C11.3, Sulfhydryl oxidase, [RH, Score=140, Expect=2e-42]} {Smed: dd_Smed_v6_9440_0_1, dd_Smed_v6_9440_0_1, [RH, Score=161, Expect=6e-51]} {RNA1509_19287, RNA1509_41230} {RNA1310_32417.1, RNA1509_19287, RNA1509_41230} {RNA1509_19287, RNA1509_41230, RNA815_24929} |
| 5. | MligTC455_21302 | 2816 | 58.66 | Mlig455_013382 | Neo: Neoblast, stringent Age: - Regeneration-enriched R6: 1.516 |
CCAR1 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_013382 {REF} {Length: 3251} {TRANSSPLICED} {Pfam: DBC1 [PF14443.8, score=105.7]; LAIKA domain [PF19256.1, score=73.7]; S1-like [PF14444.8, score=48.4]; BURAN domain [PF19257.1, score=39.8]; SAP domain [PF02037.29, score=37.7]} {Human: ENSG00000060339, CCAR1, cell division cycle and apoptosis regulator 1, [Score=224, Expect=7e-60]} {Mouse: ENSMUSG00000020074, Ccar1, cell division cycle and apoptosis regulator 1, [Score=229, Expect=5e-62]} {Celegans: WBGene00003085, ccar-1, CCAR1 homolog, [RH, Score=154, Expect=7e-38]} {Smed: dd_Smed_v6_1608_0_1, dd_Smed_v6_1608_0_1, [RH, Score=317, Expect=9e-95]} {RNA1509_10947} {RNA1310_4585.1, RNA1509_10947} {RNA1509_10947, RNA815_8621} |
| 6. | MligTC455_49867 | 590 | 12.3 | Mlig455_011558 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.462 Region-enriched R4: 1.418/0.00393 |
CSNK1A1 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_011558 {REF} {Length: 2036} {Pfam: Protein kinase domain [PF00069.27, score=99.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=61.6]; Fungal protein kinase [PF17667.3, score=34.9]} {Human: ENSG00000113712, CSNK1A1, casein kinase 1 alpha 1, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000024576, Csnk1a1, casein kinase 1, alpha 1, [RH, Score=585, Expect=0.0]} {Dmel: FBgn0015024, CkIalpha, Casein kinase Ialpha, [RH, Score=498, Expect=5e-179]} {Celegans: WBGene00002202, kin-19, Casein kinase I isoform alpha, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_1989_0_1, dd_Smed_v6_1989_0_1, [RH, Score=574, Expect=0.0]} {RNA1509_1920} {RNA1310_7964} {RNA815_4066.1} |
| 7. | MligTC455_25028 | 9376 | 195.33 | Mlig455_060404 | Neo: - Age: - Regeneration-upregulated BL: 1.477 Regeneration-enriched BL: 1.477 |
ATP5F1A | 0.954 | - | - | - | 0.954 | - | - | Mlig455_060404 {REF} {Length: 2301} {TRANSSPLICED} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=245.7]; ATP synthase alpha/beta chain, C terminal domain [PF00306.29, score=159.7]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.25, score=67.4]} {Human: ENSG00000152234, ATP5F1A, ATP synthase F1 subunit alpha, [RH, Score=881, Expect=0.0]} {Mouse: ENSMUSG00000025428, Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, [RH, Score=882, Expect=0.0]; ENSMUSG00000116276, Atp5a1, ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, [RH, Score=882, Expect=0.0]} {Dmel: FBgn0011211, blw, bellwether, [RH, Score=879, Expect=0.0]} {Celegans: WBGene00010419, H28O16.1, ATP synthase subunit alpha, mitochondrial, [RH, Score=851, Expect=0.0]} {Smed: dd_Smed_v6_731_0_1, dd_Smed_v6_731_0_1, [RH, Score=904, Expect=0.0]} {RNA1509_102} {RNA1310_10282.1} {RNA815_2316} |
| 8. | MligTC455_29504 | 1864 | 38.84 | Mlig455_063251, Mlig455_063276 | Neo: Int S/G2/M Age: Down-Down-Up Regeneration-enriched BL: 1.444 |
RNPS1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_063251 {REF} {Length: 1371} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=49.2]; Macoilin family [PF09726.11, score=19.5]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [Score=107, Expect=8e-27]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [Score=107, Expect=8e-27]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [Score=94.4, Expect=9e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [Score=86.3, Expect=2e-19]} {Smed: dd_Smed_v6_1431_0_2, dd_Smed_v6_1431_0_2, [Score=68.9, Expect=3e-13]} {RNA1509_26121} {RNA1310_17458} {RNA815_20454} Mlig455_063276 {REF} {Length: 1372} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=49.2]; Macoilin family [PF09726.11, score=19.5]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [Score=107, Expect=8e-27]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [Score=107, Expect=8e-27]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [Score=94.4, Expect=9e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [Score=86.3, Expect=2e-19]} {Smed: dd_Smed_v6_1431_0_2, dd_Smed_v6_1431_0_2, [Score=68.9, Expect=3e-13]} {RNA1509_12286, RNA1509_26121} {RNA1310_17458, RNA1509_12286} {RNA1509_12286, RNA815_20454} |
| 9. | MligTC455_35907 | 151 | 3.14 | Mlig455_035845 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_035845 {REF} {Length: 3337} {NoTransDecoderORF} {RNA1509_52914} {RNA1310_30187} {RNA815_14343.2} | |
| 10. | MligTC455_47837 | 482 | 10.04 | Mlig455_031756 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_031756 {REF} {Length: 1149} {TRANSSPLICED} {Pfam: Det1 complexing ubiquitin ligase [PF10172.11, score=34.3]} {RNA1509_59609} {RNA1310_29699} {RNA815_39284.1} |