TomoSeq data search

Data search

Results for MligTC455_35698

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_35698	115	2.39	Mlig455_056241	Neo: - Age: Down-Up-Up		Mlig455_056241 {REF} {Length: 3162} {TRANSSPLICED} {Pfam: Late endosomal/lysosomal adaptor and MAPK and MTOR activator [PF15454.8, score=32.8]} {RNA1509_26192} {RNA1310_35788} {RNA815_23846}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_35698

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.92	1.943	0.14805	0.76159
RegionR2	-0.74	1.943	0.51003	0.88783
RegionR3	-0.693	1.943	0.37737	0.91058
RegionR4	0.082	1.943	0.93482	1.00000
RegionR5	-0.59	1.943	0.40540	0.76360
RegionR6	-1.18	1.943	0.17178	0.72967
RegionR7	-0.518	1.943	0.65319	1.00000
RegionR8	0.717	1.943	0.53990	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.009	1.943	0.26296	0.96879
RegenerationR2	0.599	1.943	0.46714	0.85651
RegenerationR3	0.562	1.943	0.56182	0.88926
RegenerationR4	0.64	1.943	0.51843	0.87891
RegenerationR5	0.683	1.943	0.42869	0.81691
RegenerationR6	1.379	1.943	0.17478	0.50746
RegenerationBL	0.979	1.943	0.39880	0.76761
RegenerationTP	0.946	1.943	0.39162	0.82338

Genes with expression patterns similar to MligTC455_35698

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_35698	115	2.39	Mlig455_056241	Neo: - Age: Down-Up-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056241 {REF} {Length: 3162} {TRANSSPLICED} {Pfam: Late endosomal/lysosomal adaptor and MAPK and MTOR activator [PF15454.8, score=32.8]} {RNA1509_26192} {RNA1310_35788} {RNA815_23846}
2.	MligTC455_12514	30	0.63	Mlig455_037415	Neo: - Age: -	CHRNA6	0.951	-	-	0.951	-	-	-	Mlig455_037415 {REF} {Length: 1606} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=77.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=77.4, Expect=4e-16]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=75.1, Expect=2e-15]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=73.9, Expect=7e-15]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=80.5, Expect=3e-17]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=84.7, Expect=7e-19]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=72.8, Expect=5e-15]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=82.0, Expect=3e-18]} {RNA1509_53098} {RNA1310_110770} {RNA815_49679}
3.	MligTC455_13345	93	1.94	Mlig455_031345	Neo: - Age: Up-Down-Up	TRIM2	0.951	-	-	-	0.951	-	-	Mlig455_031345 {REF} {Length: 4287} {Pfam: NHL repeat [PF01436.23, score=105.5]; 6-bladed beta-propeller [PF17170.6, score=32.1]; Filamin/ABP280 repeat [PF00630.21, score=28.0]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=357, Expect=5e-113]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=343, Expect=4e-109]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=357, Expect=5e-113]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=341, Expect=3e-107]} {Dmel: FBgn0265356, tn, thin, [Score=142, Expect=5e-35]} {Celegans: WBGene00003026, lin-41, [Score=101, Expect=5e-22]} {Smed: dd_Smed_v6_12812_0_1, dd_Smed_v6_12812_0_1, [Score=213, Expect=7e-62]} {RNA1509_30200} {RNA1310_10977.1} {RNA815_30620}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_35698

115

2.39

Mlig455_056241

Neo: -

Age: Down-Up-Up

1.000

Mlig455_056241 {REF} {Length: 3162} {TRANSSPLICED} {Pfam: Late endosomal/lysosomal adaptor and MAPK and MTOR activator [PF15454.8, score=32.8]} {RNA1509_26192} {RNA1310_35788} {RNA815_23846}

MligTC455_12514

0.63

Mlig455_037415

Neo: -

Age: -

CHRNA6

0.951

Mlig455_037415 {REF} {Length: 1606} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=77.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=77.4, Expect=4e-16]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=75.1, Expect=2e-15]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=73.9, Expect=7e-15]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=80.5, Expect=3e-17]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=84.7, Expect=7e-19]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=72.8, Expect=5e-15]} {Smed: dd_Smed_v6_23922_0_1, dd_Smed_v6_23922_0_1, [Score=82.0, Expect=3e-18]} {RNA1509_53098} {RNA1310_110770} {RNA815_49679}

MligTC455_13345

1.94

Mlig455_031345

Neo: -

Age: Up-Down-Up

TRIM2

0.951

Mlig455_031345 {REF} {Length: 4287} {Pfam: NHL repeat [PF01436.23, score=105.5]; 6-bladed beta-propeller [PF17170.6, score=32.1]; Filamin/ABP280 repeat [PF00630.21, score=28.0]} {Human: ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=357, Expect=5e-113]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=343, Expect=4e-109]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=357, Expect=5e-113]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=341, Expect=3e-107]} {Dmel: FBgn0265356, tn, thin, [Score=142, Expect=5e-35]} {Celegans: WBGene00003026, lin-41, [Score=101, Expect=5e-22]} {Smed: dd_Smed_v6_12812_0_1, dd_Smed_v6_12812_0_1, [Score=213, Expect=7e-62]} {RNA1509_30200} {RNA1310_10977.1} {RNA815_30620}