Data search
Results for MligTC455_35921
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35921 | 460 | 9.57 | Mlig455_008308 | Neo: Int S/G2/M Age: - |
MED26 | Mlig455_008308 {REF} {Length: 1990} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=24.0]} {Human: ENSG00000105085, MED26, mediator complex subunit 26, [RH, Score=58.5, Expect=3e-10]} {Mouse: ENSMUSG00000045248, Med26, mediator complex subunit 26, [Score=58.9, Expect=6e-09]} {Dmel: FBgn0039923, MED26, Mediator complex subunit 26, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_7416_0_1, dd_Smed_v6_7416_0_1, [Score=58.9, Expect=2e-09]} {RNA1509_54273} {RNA1310_12199} {RNA815_24125} |
Cumulative graph for MligTC455_35921
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.042 | 3.605 | 0.97330 | 1.00000 | |
| RegionR2 | -0.112 | 3.605 | 0.83991 | 1.00000 | |
| RegionR3 | -0.385 | 3.605 | 0.36305 | 0.89886 | |
| RegionR4 | -0.14 | 3.605 | 0.77743 | 1.00000 | |
| RegionR5 | 0.709 | 3.605 | 0.03754 | 0.15224 | |
| RegionR6 | -0.167 | 3.605 | 0.69818 | 1.00000 | |
| RegionR7 | 0.161 | 3.605 | 0.78486 | 1.00000 | |
| RegionR8 | -0.108 | 3.605 | 0.89128 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.826 | 3.605 | 0.18266 | 0.92312 | |
| RegenerationR2 | 0.451 | 3.605 | 0.31077 | 0.75080 | |
| RegenerationR3 | 0.385 | 3.605 | 0.43529 | 0.82423 | |
| RegenerationR4 | 0.524 | 3.605 | 0.26974 | 0.71631 | |
| RegenerationR5 | -0.367 | 3.605 | 0.37209 | 0.78154 | |
| RegenerationR6 | 1.116 | 3.605 | 0.01866 | 0.16871 | |
| RegenerationBL | 0.953 | 3.605 | 0.10674 | 0.38561 | |
| RegenerationTP | -0.122 | 3.605 | 0.86534 | 1.00000 |
Genes with expression patterns similar to MligTC455_35921
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35921 | 460 | 9.57 | Mlig455_008308 | Neo: Int S/G2/M Age: - |
MED26 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008308 {REF} {Length: 1990} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=24.0]} {Human: ENSG00000105085, MED26, mediator complex subunit 26, [RH, Score=58.5, Expect=3e-10]} {Mouse: ENSMUSG00000045248, Med26, mediator complex subunit 26, [Score=58.9, Expect=6e-09]} {Dmel: FBgn0039923, MED26, Mediator complex subunit 26, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_7416_0_1, dd_Smed_v6_7416_0_1, [Score=58.9, Expect=2e-09]} {RNA1509_54273} {RNA1310_12199} {RNA815_24125} |
| 2. | MligTC455_44915 | 297 | 6.18 | Mlig455_025237 | Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=-0.571 Region-enriched R4: 1.968/0.04430 |
GMPPA | 1.692 | - | - | - | - | 0.950 | 0.742 | Mlig455_025237 {REF} {Length: 1805} {TRANSSPLICED} {Pfam: Nucleotidyl transferase [PF00483.25, score=97.0]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=29.6]; MobA-like NTP transferase domain [PF12804.9, score=21.3]} {Human: ENSG00000144591, GMPPA, GDP-mannose pyrophosphorylase A, [RH, Score=458, Expect=1e-159]} {Mouse: ENSMUSG00000033021, Gmppa, GDP-mannose pyrophosphorylase A, [RH, Score=461, Expect=4e-161]} {Dmel: FBgn0034035, CG8207, [RH, Score=450, Expect=1e-156]} {Celegans: WBGene00021628, Y47D9A.1, [RH, Score=398, Expect=9e-137]} {Smed: dd_Smed_v6_4150_0_1, dd_Smed_v6_4150_0_1, [RH, Score=496, Expect=6e-175]} {RNA1509_37379} {RNA1310_15544} {RNA815_10312.2} |
| 3. | MligTC455_29356 | 343 | 7.14 | Mlig455_047854 | Neo: Irradiation Age: - |
TRIM3 | 1.687 | - | - | - | - | 0.965 | 0.722 | Mlig455_047854 {REF} {Length: 5745} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=89.3]; B-box zinc finger [PF00643.26, score=35.4]; 6-bladed beta-propeller [PF17170.6, score=20.7]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=147, Expect=8e-36]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=147, Expect=5e-36]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=465, Expect=5e-147]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=224, Expect=2e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_45780, RNA1509_55253, RNA1509_7414} {RNA1310_9506.1, RNA1509_45780, RNA1509_55253} {RNA1509_45780, RNA1509_55253, RNA815_13729.1} |
| 4. | MligTC455_22886 | 931 | 19.39 | Mlig455_021487, Mlig455_062014, Mlig455_063218, Mlig455_067371 | Neo: - Age: - |
NIPBL | 0.954 | - | - | - | - | 0.954 | - | Mlig455_021487 {REF} {Length: 8862} {TRANSSPLICED} {Pfam: Sister chromatid cohesion C-terminus [PF12830.9, score=203.2]; HEAT repeat associated with sister chromatid cohesion [PF12765.9, score=42.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=33.7]; HEAT repeat [PF02985.24, score=24.0]} {Human: ENSG00000164190, NIPBL, NIPBL, cohesin loading factor, [RH, Score=1256, Expect=0.0]} {Mouse: ENSMUSG00000022141, Nipbl, NIPBL cohesin loading factor, [RH, Score=1258, Expect=0.0]} {Dmel: FBgn0026401, Nipped-B, [RH, Score=896, Expect=0.0]} {Celegans: WBGene00004166, pqn-85, Nipped-B-like protein pqn-85, [RH, Score=694, Expect=0.0]} {Smed: dd_Smed_v6_3927_0_2, dd_Smed_v6_3927_0_2, [RH, Score=1231, Expect=0.0]} {RNA1509_3698} {RNA1310_836.2} {RNA815_211.1} Mlig455_062014 {REF} {Length: 8611} {Pfam: Sister chromatid cohesion C-terminus [PF12830.9, score=202.8]; HEAT repeat associated with sister chromatid cohesion [PF12765.9, score=42.3]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=33.3]; HEAT repeat [PF02985.24, score=24.4]} {Human: ENSG00000164190, NIPBL, NIPBL, cohesin loading factor, [RH, Score=1252, Expect=0.0]} {Mouse: ENSMUSG00000022141, Nipbl, NIPBL cohesin loading factor, [RH, Score=1255, Expect=0.0]} {Dmel: FBgn0026401, Nipped-B, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00004166, pqn-85, Nipped-B-like protein pqn-85, [RH, Score=693, Expect=0.0]} {Smed: dd_Smed_v6_3927_0_1, dd_Smed_v6_3927_0_1, [RH, Score=1239, Expect=0.0]} {RNA1509_40869} {RNA1310_836.1} {RNA815_211.1} Mlig455_063218 {REF} {Length: 2231} {TRANSSPLICED} {Human: ENSG00000164190, NIPBL, NIPBL, cohesin loading factor, [Score=57.0, Expect=8e-08]} {Mouse: ENSMUSG00000022141, Nipbl, NIPBL cohesin loading factor, [Score=57.4, Expect=5e-08]} {Dmel: FBgn0026401, Nipped-B, [Score=48.9, Expect=1e-05]} {Smed: dd_Smed_v6_8759_0_1, dd_Smed_v6_8759_0_1, [Score=56.6, Expect=4e-08]} {RNA1509_40869} {RNA1310_12124} {RNA815_11735} Mlig455_067371 {REF} {Length: 7885} {Pfam: Sister chromatid cohesion C-terminus [PF12830.9, score=203.2]; HEAT repeat associated with sister chromatid cohesion [PF12765.9, score=42.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=33.9]; HEAT repeat [PF02985.24, score=24.0]} {Human: ENSG00000164190, NIPBL, NIPBL, cohesin loading factor, [RH, Score=1252, Expect=0.0]} {Mouse: ENSMUSG00000022141, Nipbl, NIPBL cohesin loading factor, [RH, Score=1256, Expect=0.0]} {Dmel: FBgn0026401, Nipped-B, [RH, Score=895, Expect=0.0]} {Celegans: WBGene00004166, pqn-85, Nipped-B-like protein pqn-85, [RH, Score=693, Expect=0.0]} {Smed: dd_Smed_v6_3927_0_1, dd_Smed_v6_3927_0_1, [RH, Score=1230, Expect=0.0]} {RNA1509_2412, RNA1509_40869} {RNA1310_836.1, RNA1509_2412} {RNA1509_2412, RNA815_211.1} |
| 5. | MligTC455_04904 | 1022 | 21.29 | Mlig455_042191, Mlig455_059012 | Neo: Int S/G2/M Age: Up-Down-Down Region-specific R4: 2.056 Region-enriched R4: 2.333/0.00000 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_042191 {REF} {Length: 2371} {TRANSSPLICED} {Pfam: Arv1-like family [PF04161.15, score=114.0]} {Celegans: WBGene00011040, R05H5.5, [RH, Score=84.7, Expect=3e-19]} {Smed: dd_Smed_v6_7276_0_1, dd_Smed_v6_7276_0_1, [RH, Score=87.4, Expect=3e-20]} {RNA1509_23109} {RNA1310_31806, RNA1509_23109} {RNA1509_23109, RNA815_16380} Mlig455_059012 {REF} {Length: 2283} {TRANSSPLICED} {Pfam: Arv1-like family [PF04161.15, score=114.8]} {Celegans: WBGene00011040, R05H5.5, [RH, Score=84.0, Expect=5e-19]} {Smed: dd_Smed_v6_7276_0_1, dd_Smed_v6_7276_0_1, [RH, Score=87.0, Expect=5e-20]} {RNA1509_23109, RNA1509_38810} {RNA1310_31806, RNA1509_38810} {RNA1509_38810, RNA815_16380} |
|
| 6. | MligTC455_44196 | 2055 | 42.8 | Mlig455_033547 | Neo: Int S/G2/M Age: - |
PIN4 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_033547 {REF} {Length: 1399} {TRANSSPLICED} {Pfam: PPIC-type PPIASE domain [PF13616.8, score=67.1]; PPIC-type PPIASE domain [PF00639.23, score=56.4]} {Human: ENSG00000102309, PIN4, peptidylprolyl cis/trans isomerase, NIMA-interacting 4, [RH, Score=175, Expect=3e-57]} {Mouse: ENSMUSG00000079480, Pin4, protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin), [RH, Score=172, Expect=3e-56]} {Dmel: FBgn0039305, CG11858, [RH, Score=171, Expect=6e-56]} {Celegans: WBGene00012996, pinn-4, Peptidyl-prolyl cis-trans isomerase, [RH, Score=174, Expect=9e-58]} {Smed: dd_Smed_v6_3231_0_1, dd_Smed_v6_3231_0_1, [RH, Score=176, Expect=1e-58]} {RNA1509_15413, RNA1509_8905} {RNA1310_46855.2, RNA1509_15413, RNA1509_8905} {RNA1509_15413, RNA1509_8905, RNA815_22755.1} |