Data search


search
Exact
Search

Results for MligTC455_35994

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35994 19 0.39 Mlig455_041207

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.775

Mlig455_041207 {REF} {Length: 3944} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=24.4]} {RNA1509_37153} {RNA1310_17647} {RNA815_17449}

Cumulative graph for MligTC455_35994

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.483 0.745 0.99990 1.00000
RegionR2 0.734 0.745 0.99991 1.00000
RegionR3 0.079 0.745 0.99992 1.00000
RegionR4 -0.748 0.745 0.99996 1.00000
RegionR5 -0.246 0.745 0.99991 1.00000
RegionR6 0.071 0.745 0.99991 1.00000
RegionR7 0.274 0.745 0.99999 1.00000
RegionR8 0.319 0.745 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.8 0.745 1.00000 1.00000
RegenerationR2 3.628 0.745 0.19479 0.63929
RegenerationR3 3.951 0.745 0.26774 0.70201
RegenerationR4 2.871 0.745 0.35861 0.78664
RegenerationR5 2.99 0.745 0.25256 0.68552
RegenerationR6 2.69 0.745 0.33573 0.68186
RegenerationBL 4.625 0.745 0.13305 0.43460
RegenerationTP 0.257 0.745 1.00000 1.00000


Genes with expression patterns similar to MligTC455_35994

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35994 19 0.39 Mlig455_041207

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.775

1 - - - - 1.000 - Mlig455_041207 {REF} {Length: 3944} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=24.4]} {RNA1509_37153} {RNA1310_17647} {RNA815_17449}
2. MligTC455_43787 37 0.77 Mlig455_054406

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.392

CCDC60 0.95 - - - - 0.950 - Mlig455_054406 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4698) [PF15769.7, score=170.4]} {Human: ENSG00000183273, CCDC60, coiled-coil domain containing 60, [Score=62.8, Expect=2e-09]} {Mouse: ENSMUSG00000043913, Ccdc60, coiled-coil domain containing 60, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_14286_0_1, dd_Smed_v6_14286_0_1, [Score=115, Expect=2e-26]} {RNA1509_58886} {RNA1310_1558.2} {RNA815_11153}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA