TomoSeq data search

Data search

Results for MligTC455_36029

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_36029

671

13.98

Mlig455_014839

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.349

Mlig455_014839 {REF} {Length: 1964} {Pfam: Innexin [PF00876.20, score=315.8]} {Dmel: FBgn0085387, shakB, shaking B, [Score=92.0, Expect=4e-20]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=242, Expect=4e-76]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=243, Expect=1e-75]} {RNA1509_11722} {RNA1310_16380.1, RNA1509_11722} {RNA1509_11722, RNA815_6041}

Cumulative graph for MligTC455_36029

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.663	4.015	0.01100	0.30492
RegionR2	-0.284	4.015	0.92349	1.00000
RegionR3	0.76	4.015	0.35863	0.89387
RegionR4	1.544	4.015	0.04684	0.18459
RegionR5	1.018	4.015	0.18260	0.46101
RegionR6	1.353	4.015	0.04795	0.41042
RegionR7	1.33	4.015	0.10464	0.61549
RegionR8	1.942	4.015	0.02673	0.31952

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.767	4.015	0.09374	0.80222
RegenerationR2	1.172	4.015	0.00626	0.12670
RegenerationR3	-0.345	4.015	0.46177	0.83864
RegenerationR4	0.087	4.015	0.85066	1.00000
RegenerationR5	-0.422	4.015	0.36927	0.77953
RegenerationR6	-0.518	4.015	0.26273	0.61253
RegenerationBL	-0.446	4.015	0.35129	0.71880
RegenerationTP	-0.281	4.015	0.58998	0.95485

Genes with expression patterns similar to MligTC455_36029

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36029	671	13.98	Mlig455_014839	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.349		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014839 {REF} {Length: 1964} {Pfam: Innexin [PF00876.20, score=315.8]} {Dmel: FBgn0085387, shakB, shaking B, [Score=92.0, Expect=4e-20]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=242, Expect=4e-76]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=243, Expect=1e-75]} {RNA1509_11722} {RNA1310_16380.1, RNA1509_11722} {RNA1509_11722, RNA815_6041}
2.	MligTC455_39218	2348	48.93	Mlig455_041424, Mlig455_061374, Mlig455_061402	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.484 Region-enriched R8: 1.418/0.00334		2.709	-	-	0.872	0.964	0.873	-	Mlig455_041424 {REF} {Length: 2036} {RNA1509_20247} {RNA1310_14766.1} {RNA815_5556.1} Mlig455_061374 {REF} {Length: 2145} {RNA1509_20247} {RNA1310_14766.1} {RNA815_5556.1} Mlig455_061402 {REF} {Length: 2213} {RNA1509_42364, RNA1509_44881} {RNA1310_14766.1, RNA1509_42364} {RNA1509_42364, RNA815_5556.1}
3.	MligTC455_45833	435	9.07	Mlig455_024105	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.498	CHRNA3	2.647	-	-	-	0.826	0.856	0.965	Mlig455_024105 {REF} {Length: 2298} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=246.4]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=215.5]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=391, Expect=4e-131]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=378, Expect=7e-126]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=372, Expect=1e-123]} {Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=389, Expect=2e-130]} {Dmel: FBgn0000038, nAChRbeta1, nicotinic Acetylcholine Receptor beta1, [RH, Score=502, Expect=2e-174]} {Celegans: WBGene00006765, unc-29, Acetylcholine receptor subunit beta-type unc-29, [RH, Score=401, Expect=2e-135]} {Smed: dd_Smed_v6_12535_0_1, dd_Smed_v6_12535_0_1, [Score=465, Expect=4e-159]} {RNA1509_30259, RNA1509_56781} {RNA1310_14242, RNA1509_30259, RNA1509_56781} {RNA1509_30259, RNA1509_56781, RNA815_14328}
4.	MligTC455_29051	484	10.08	Mlig455_064767	Neo: - Age: -	TMEM30A	1.907	-	-	-	-	0.955	0.952	Mlig455_064767 {REF} {Length: 2581} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=265.5]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [RH, Score=234, Expect=7e-73]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=241, Expect=6e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=294, Expect=8e-97]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=246, Expect=3e-78]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=274, Expect=3e-89]} {RNA1509_38539, RNA1509_38955} {RNA1310_9371, RNA1509_38539, RNA1509_38955} {RNA1509_38539, RNA1509_38955, RNA815_12157}
5.	MligTC455_46563	675	14.06	Mlig455_031729	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.371		1.882	-	-	-	-	0.904	0.978	Mlig455_031729 {REF} {Length: 3393} {RNA1509_50830, RNA1509_9486} {RNA1310_4618, RNA1509_50830} {RNA1509_50830, RNA815_19170}
6.	MligTC455_47148	1161	24.18	Mlig455_054041	Neo: - Age: logFC(26M/2M)=-0.290	TTC24	1.804	-	-	-	-	0.851	0.953	Mlig455_054041 {REF} {Length: 2392} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=77.4]; Tetratricopeptide repeat [PF07719.19, score=61.9]; Tetratricopeptide repeat [PF13176.8, score=54.0]; Tetratricopeptide repeat [PF00515.30, score=52.7]; Tetratricopeptide repeat [PF13181.8, score=35.3]; MalT-like TPR region [PF17874.3, score=20.9]} {Human: ENSG00000187862, TTC24, tetratricopeptide repeat domain 24, [RH, Score=102, Expect=5e-22]} {Mouse: ENSMUSG00000051036, Ttc24, tetratricopeptide repeat domain 24, [RH, Score=66.6, Expect=2e-11]} {RNA1509_21506, RNA1509_39716, RNA1509_7768} {RNA1310_13043, RNA1509_21506, RNA1509_39716, RNA1509_7768} {RNA1509_21506, RNA1509_39716, RNA1509_7768, RNA815_789.1}
7.	MligTC455_54053	754	15.71	Mlig455_003303	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.623	ETHE1	1.742	-	-	-	0.786	-	0.956	Mlig455_003303 {REF} {Length: 1392} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=52.2]} {Human: ENSG00000105755, ETHE1, ETHE1, persulfide dioxygenase, [Score=304, Expect=9e-105]} {Mouse: ENSMUSG00000064254, Ethe1, ethylmalonic encephalopathy 1, [RH, Score=306, Expect=8e-106]} {Dmel: FBgn0050022, CG30022, [RH, Score=306, Expect=1e-105]} {Celegans: WBGene00007886, ethe-1, ETHE1 (Human ETHylmalonic Encephalopathy) homolog, [RH, Score=282, Expect=9e-97]} {Smed: dd_Smed_v6_944_0_1, dd_Smed_v6_944_0_1, [RH, Score=313, Expect=5e-109]} {RNA1509_6544} {RNA1310_29246, RNA1509_6544} {RNA1509_6544, RNA815_15142}
8.	MligTC455_46102	756	15.76	Mlig455_008712, Mlig455_046924	Neo: - Age: logFC(26M/2M)=-0.553		1.723	-	-	-	-	0.752	0.971	Mlig455_008712 {REF} {Length: 2179} {RNA1310_16915.1} {RNA815_17668} Mlig455_046924 {REF} {Length: 2040} {RNA1310_16915.1} {RNA815_17668}
9.	MligTC455_13945	222	4.62	Mlig455_008055	Neo: - Age: logFC(26M/2M)=-0.728	SYT14	1.698	-	-	-	-	0.747	0.951	Mlig455_008055 {REF} {Length: 3788} {Pfam: C2 domain [PF00168.32, score=38.0]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=133, Expect=5e-32]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=134, Expect=7e-32]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=109, Expect=2e-24]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=137, Expect=2e-34]} {RNA1509_12459} {RNA1310_670.1, RNA1509_12459} {RNA1509_12459, RNA815_9293}
10.	MligTC455_14477	676	14.08	Mlig455_030081	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.270		1.683	-	-	-	-	0.725	0.958	Mlig455_030081 {REF} {Length: 1773} {RNA1509_4043} {RNA1310_3308.1, RNA1509_4043} {RNA1509_4043, RNA815_1039.1}
11.	MligTC455_18977	556	11.59	Mlig455_050730, Mlig455_050740	Neo: - Age: Down-Up-Down	ALS2CR12	1.673	-	-	-	0.717	-	0.956	Mlig455_050730 {REF} {Length: 3789} {TRANSSPLICED} {Human: ENSG00000155749, ALS2CR12, amyotrophic lateral sclerosis 2 chromosome region 12, [RH, Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_10132_0_1, dd_Smed_v6_10132_0_1, [RH, Score=146, Expect=7e-38]} {RNA1509_18099} {RNA1310_18415} {RNA815_7356} Mlig455_050740 {REF} {Length: 3786} {TRANSSPLICED} {Human: ENSG00000155749, ALS2CR12, amyotrophic lateral sclerosis 2 chromosome region 12, [RH, Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_10132_0_1, dd_Smed_v6_10132_0_1, [RH, Score=146, Expect=7e-38]} {RNA1509_18099} {RNA1310_18415, RNA1509_18099} {RNA1509_18099, RNA815_7356}
12.	MligTC455_10394	1968	41.01	Mlig455_059906	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.548		0.979	-	-	-	0.979	-	-	Mlig455_059906 {REF} {Length: 1095} {Pfam: EF hand [PF00036.34, score=40.0]; EF-hand domain pair [PF13499.8, score=33.1]; EF-hand domain [PF13405.8, score=29.7]; EF hand [PF13202.8, score=23.1]} {RNA1509_16615} {RNA1310_34130.1, RNA1509_16615} {RNA1509_16615, RNA815_15871.1}
13.	MligTC455_42655	514	10.72	Mlig455_004884	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.544	LMLN2	0.974	-	-	-	-	-	0.974	Mlig455_004884 {REF} {Length: 3441} {Pfam: Leishmanolysin [PF01457.18, score=39.9]} {Human: ENSG00000283654, LMLN2, leishmanolysin like peptidase 2, [RH, Score=91.7, Expect=2e-18]} {Mouse: ENSMUSG00000114865, Gm29776, predicted gene, 29776, [RH, Score=87.8, Expect=2e-17]} {Dmel: FBgn0086359, Invadolysin, [Score=75.5, Expect=1e-13]} {Celegans: WBGene00012796, Y43F4A.1, Leishmanolysin-like peptidase, [Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_9167_0_1, dd_Smed_v6_9167_0_1, [Score=76.3, Expect=4e-14]} {RNA1509_37538, RNA1509_53385} {RNA1310_4126, RNA1509_37538, RNA1509_53385} {RNA1509_37538, RNA1509_53385, RNA815_1195}
14.	MligTC455_45674	1093	22.78	Mlig455_023097	Neo: - Age: -	TPM1	0.964	-	-	-	0.964	-	-	Mlig455_023097 {REF} {Length: 2197} {Pfam: Tropomyosin [PF00261.22, score=184.1]; Tropomyosin like [PF12718.9, score=105.1]; Protein of unknown function (DUF724) [PF05266.16, score=21.0]; Autophagy protein 16 (ATG16) [PF08614.13, score=19.1]} {Human: ENSG00000140416, TPM1, tropomyosin 1, [Score=175, Expect=8e-53]; ENSG00000167460, TPM4, tropomyosin 4, [Score=167, Expect=7e-50]} {Mouse: ENSMUSG00000032366, Tpm1, tropomyosin 1, alpha, [Score=174, Expect=6e-53]} {Dmel: FBgn0004117, Tm2, Tropomyosin 2, [Score=166, Expect=7e-50]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_436_0_1, dd_Smed_v6_436_0_1, [Score=198, Expect=2e-62]} {RNA1509_15793} {RNA1310_28577.1} {RNA815_13469}
15.	MligTC455_17958	490	10.21	Mlig455_068231	Neo: - Age: logFC(26M/2M)=-0.406	CCDC83	0.961	-	-	-	-	-	0.961	Mlig455_068231 {REF} {Length: 2825} {Pfam: Domain of unknown function (DUF4618) [PF15397.8, score=19.3]} {Human: ENSG00000150676, CCDC83, coiled-coil domain containing 83, [RH, Score=145, Expect=2e-38]} {Mouse: ENSMUSG00000030617, Ccdc83, coiled-coil domain containing 83, [RH, Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_16528_0_1, dd_Smed_v6_16528_0_1, [RH, Score=96.7, Expect=7e-22]} {RNA1509_34307, RNA1509_49481} {RNA1310_7992.1, RNA1509_34307, RNA1509_49481} {RNA1509_34307, RNA1509_49481, RNA815_3361.1}
16.	MligTC455_32938	319	6.64	Mlig455_039489	Neo: - Age: logFC(26M/2M)=-0.529		0.956	-	-	-	0.956	-	-	Mlig455_039489 {REF} {Length: 1665} {RNA1509_14386} {RNA1310_21532} {RNA815_8850}
17.	MligTC455_35402	1341	27.95	Mlig455_045498	Neo: - Age: -	NEBL	0.953	-	-	-	0.953	-	-	Mlig455_045498 {REF} {Length: 3784} {Pfam: Nebulin repeat [PF00880.20, score=59.7]; Variant SH3 domain [PF14604.8, score=50.1]; LIM domain [PF00412.24, score=47.8]; SH3 domain [PF00018.30, score=45.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=23.8]; Variant SH3 domain [PF07653.19, score=19.7]} {Human: ENSG00000078114, NEBL, nebulette, [RH, Score=222, Expect=7e-71]} {Mouse: ENSMUSG00000038366, Lasp1, LIM and SH3 protein 1, [RH, Score=218, Expect=2e-69]} {Dmel: FBgn0063485, Lasp, [RH, Score=190, Expect=3e-56]} {Celegans: WBGene00018367, F42H10.3, LIM and SH3 domain protein F42H10.3, [RH, Score=166, Expect=6e-49]} {Smed: dd_Smed_v6_1218_0_1, dd_Smed_v6_1218_0_1, [RH, Score=120, Expect=2e-32]} {RNA1509_28611, RNA1509_52635} {RNA1310_6041.1, RNA1509_28611} {RNA1509_28611, RNA815_14187.1}

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