Data search


search
Exact
Search

Results for MligTC455_36076

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_36076 34 0.70 Mlig455_062041

Neo: -

Age: -

Mlig455_062041 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_12332} {RNA1310_47792} {RNA815_31459}

Cumulative graph for MligTC455_36076

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.432 1.043 0.58202 1.00000
RegionR2 2.895 1.043 0.13084 0.44878
RegionR3 1.044 1.043 0.50778 0.99745
RegionR4 -0.827 1.043 0.98535 1.00000
RegionR5 -1.033 1.043 0.99516 1.00000
RegionR6 -0.08 1.043 0.90364 1.00000
RegionR7 0.68 1.043 0.76342 1.00000
RegionR8 0.753 1.043 0.82957 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.253 1.043 1.00000 1.00000
RegenerationR2 -1.189 1.043 0.27670 0.72089
RegenerationR3 -0.075 1.043 0.94416 1.00000
RegenerationR4 0.732 1.043 0.60745 0.91632
RegenerationR5 2.104 1.043 0.11515 0.51090
RegenerationR6 1.701 1.043 0.26975 0.62018
RegenerationBL -0.912 1.043 0.75396 1.00000
RegenerationTP -0.578 1.043 0.84652 1.00000


Genes with expression patterns similar to MligTC455_36076

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_36076 34 0.7 Mlig455_062041

Neo: -

Age: -

3 - - 1.000 - 1.000 1.000 Mlig455_062041 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_12332} {RNA1310_47792} {RNA815_31459}
2. MligTC455_42301 167 3.48 Mlig455_003238

Neo: -

Age: Up-Down-Down

0.959 - - - - 0.959 - Mlig455_003238 {REF} {Length: 1349} {NoTransDecoderORF} {RNA1509_47710} {RNA1310_102904} {RNA815_7856.3}
3. MligTC455_45396 570 11.86 Mlig455_001729, Mlig455_063314

Neo: Neoblast

Age: -

Region-enriched R5: 1.105/0.00541

TMEM11 0.953 - - - - 0.953 -

Mlig455_001729 {REF} {Length: 2066} {Pfam: Mitochondrial morphogenesis regulator [PF14972.8, score=36.7]} {Dmel: FBgn0044419, Pmi, [Score=45.8, Expect=8e-06]} {RNA1509_34143} {RNA1310_42579} {RNA815_22189}

Mlig455_063314 {REF} {Length: 1960} {TRANSSPLICED} {Pfam: Mitochondrial morphogenesis regulator [PF14972.8, score=109.7]} {Human: ENSG00000178307, TMEM11, transmembrane protein 11, [RH, Score=71.2, Expect=5e-15]} {Mouse: ENSMUSG00000043284, Tmem11, transmembrane protein 11, [RH, Score=70.9, Expect=4e-15]} {Dmel: FBgn0044419, Pmi, [RH, Score=76.3, Expect=3e-17]} {Smed: dd_Smed_v6_10970_0_1, dd_Smed_v6_10970_0_1, [RH, Score=97.4, Expect=2e-25]} {RNA1509_34143} {RNA1310_42579, RNA1509_34143} {RNA1509_34143, RNA815_22189}
4. MligTC455_28365 270 5.63 Mlig455_068689

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.758/0.01074

RTL1 0.952 - - - - 0.952 - Mlig455_068689 {REF} {Length: 9784} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=100.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]; Integrase core domain [PF00665.28, score=46.4]; Integrase zinc binding domain [PF17921.3, score=35.6]; 'Cold-shock' DNA-binding domain [PF00313.24, score=29.6]; Zinc knuckle [PF13696.8, score=21.3]; Zinc knuckle [PF00098.25, score=20.8]; Aspartyl protease [PF13650.8, score=20.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.4]; Aspartyl protease [PF09668.12, score=19.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.4, Expect=5e-20]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=317, Expect=2e-94]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
5. MligTC455_48039 154 3.21 Mlig455_069431

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_069431 {REF} {Length: 2113} {Pfam: F5/8 type C domain [PF00754.27, score=19.8]} {RNA1509_26806} {RNA1310_28432} {RNA815_8574}
6. MligTC455_04085 164 3.43 Mlig455_007705, Mlig455_021037, Mlig455_021071

Neo: -

Age: -

WSCD2 0.95 - - - - 0.950 -

Mlig455_007705 {REF} {Length: 245} {Pfam: WSC domain [PF01822.21, score=47.7]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=44.7, Expect=8e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=45.4, Expect=8e-07]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.2, Expect=6e-09]} {RNA1310_29732.1} {RNA815_51203}

Mlig455_021037 {REF} {Length: 1582} {TRANSSPLICED} {Pfam: WSC domain [PF01822.21, score=51.9]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.9, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=55.1, Expect=1e-08]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=57.8, Expect=1e-09]} {RNA1310_29732.1} {RNA815_44336}

Mlig455_021071 {REF} {Length: 2592} {RNA1310_29732.1} {RNA815_44336}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA