Data search
Results for MligTC455_36088
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36088 | 610 | 12.72 | Mlig455_009940 | Neo: - Age: - |
ACSS1 | Mlig455_009940 {REF} {Length: 3068} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=286.2]; AMP-binding enzyme C-terminal domain [PF13193.8, score=90.0]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=40.0]} {Human: ENSG00000154930, ACSS1, acyl-CoA synthetase short chain family member 1, [RH, Score=741, Expect=0.0]} {Mouse: ENSMUSG00000027452, Acss1, acyl-CoA synthetase short-chain family member 1, [RH, Score=756, Expect=0.0]} {Dmel: FBgn0012034, AcCoAS, Acetyl Coenzyme A synthase, [Score=533, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=497, Expect=4e-168]} {Smed: dd_Smed_v6_6561_0_1, dd_Smed_v6_6561_0_1, [RH, Score=730, Expect=0.0]} {RNA1509_44916, RNA1509_7714} {RNA1310_11929, RNA1509_44916, RNA1509_7714} {RNA1509_44916, RNA1509_7714, RNA815_3848} |
Cumulative graph for MligTC455_36088
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.041 | 4.02 | 0.35948 | 1.00000 | |
| RegionR2 | 0.17 | 4.02 | 0.74340 | 1.00000 | |
| RegionR3 | 0.599 | 4.02 | 0.13836 | 0.63559 | |
| RegionR4 | -0.168 | 4.02 | 0.72879 | 1.00000 | |
| RegionR5 | 0.574 | 4.02 | 0.12068 | 0.34783 | |
| RegionR6 | 0.402 | 4.02 | 0.34153 | 0.92864 | |
| RegionR7 | -0.135 | 4.02 | 0.80325 | 1.00000 | |
| RegionR8 | -0.402 | 4.02 | 0.56115 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.453 | 4.02 | 0.15449 | 0.89666 | |
| RegenerationR2 | -0.797 | 4.02 | 0.08277 | 0.46278 | |
| RegenerationR3 | -0.124 | 4.02 | 0.78787 | 0.97826 | |
| RegenerationR4 | 0.244 | 4.02 | 0.62126 | 0.92115 | |
| RegenerationR5 | 0.289 | 4.02 | 0.49810 | 0.85751 | |
| RegenerationR6 | -0.389 | 4.02 | 0.42071 | 0.75157 | |
| RegenerationBL | 0.408 | 4.02 | 0.43776 | 0.80529 | |
| RegenerationTP | 0.147 | 4.02 | 0.81322 | 1.00000 |
Genes with expression patterns similar to MligTC455_36088
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36088 | 610 | 12.72 | Mlig455_009940 | Neo: - Age: - |
ACSS1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009940 {REF} {Length: 3068} {TRANSSPLICED} {Pfam: AMP-binding enzyme [PF00501.30, score=286.2]; AMP-binding enzyme C-terminal domain [PF13193.8, score=90.0]; Acetyl-coenzyme A synthetase N-terminus [PF16177.7, score=40.0]} {Human: ENSG00000154930, ACSS1, acyl-CoA synthetase short chain family member 1, [RH, Score=741, Expect=0.0]} {Mouse: ENSMUSG00000027452, Acss1, acyl-CoA synthetase short-chain family member 1, [RH, Score=756, Expect=0.0]} {Dmel: FBgn0012034, AcCoAS, Acetyl Coenzyme A synthase, [Score=533, Expect=0.0]} {Celegans: WBGene00007969, acs-19, Acetyl-coenzyme A synthetase, [Score=497, Expect=4e-168]} {Smed: dd_Smed_v6_6561_0_1, dd_Smed_v6_6561_0_1, [RH, Score=730, Expect=0.0]} {RNA1509_44916, RNA1509_7714} {RNA1310_11929, RNA1509_44916, RNA1509_7714} {RNA1509_44916, RNA1509_7714, RNA815_3848} |
| 2. | MligTC455_17152 | 562 | 11.7 | Mlig455_023708 | Neo: - Age: logFC(26M/2M)=-0.616 |
TMEM41A | 2.46 | - | - | - | 0.797 | 0.713 | 0.950 | Mlig455_023708 {REF} {Length: 2108} {Pfam: SNARE associated Golgi protein [PF09335.13, score=64.9]} {Human: ENSG00000163900, TMEM41A, transmembrane protein 41A, [Score=204, Expect=2e-64]} {Mouse: ENSMUSG00000022856, Tmem41a, transmembrane protein 41a, [RH, Score=212, Expect=7e-68]} {Dmel: FBgn0030850, stas, Stasimon, [Score=148, Expect=2e-42]} {Celegans: WBGene00011590, bus-19, [RH, Score=194, Expect=6e-61]} {Smed: dd_Smed_v6_3066_0_1, dd_Smed_v6_3066_0_1, [Score=194, Expect=6e-61]} {RNA1509_12692, RNA1509_35218, RNA1509_36852} {RNA1310_27630, RNA1509_12692, RNA1509_35218, RNA1509_36852} {RNA1509_12692, RNA1509_35218, RNA1509_36852, RNA815_7258.1} |
| 3. | MligTC455_49301 | 506 | 10.54 | Mlig455_059657 | Neo: - Age: - |
1.817 | - | - | - | 0.861 | - | 0.956 | Mlig455_059657 {REF} {Length: 3796} {RNA1509_8092} {RNA1310_5004.1} {RNA815_4814} | |
| 4. | MligTC455_43217 | 2452 | 51.09 | Mlig455_033309 | Neo: - Age: - |
1.763 | - | - | 0.813 | - | - | 0.950 | Mlig455_033309 {REF} {Length: 579} {TRANSSPLICED} {Pfam: COMM domain [PF07258.16, score=40.0]} {Smed: dd_Smed_v6_3552_0_1, dd_Smed_v6_3552_0_1, [RH, Score=55.1, Expect=8e-12]} {RNA1509_10026, RNA1509_17279, RNA1509_32823} {RNA1310_62531, RNA1509_10026, RNA1509_17279, RNA1509_32823} {RNA1509_10026, RNA1509_17279, RNA1509_32823, RNA815_13373.1} | |
| 5. | MligTC455_50713 | 1646 | 34.29 | Mlig455_004991 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.627 Region-enriched R5: 1.244/0.00002 |
MAP1LC3C | 1.712 | - | - | - | 0.759 | - | 0.953 | Mlig455_004991 {REF} {Length: 1864} {TRANSSPLICED} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=130.5]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=20.0]} {Human: ENSG00000197769, MAP1LC3C, microtubule associated protein 1 light chain 3 gamma, [Score=150, Expect=4e-47]} {Mouse: ENSMUSG00000031812, Map1lc3b, microtubule-associated protein 1 light chain 3 beta, [Score=125, Expect=6e-38]; ENSMUSG00000027602, Map1lc3a, microtubule-associated protein 1 light chain 3 alpha, [Score=122, Expect=9e-37]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=98.6, Expect=2e-27]} {Celegans: WBGene00002981, lgg-2, [RH, Score=107, Expect=8e-31]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [Score=104, Expect=9e-30]} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1310_32049.1, RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101} {RNA1509_20665, RNA1509_27527, RNA1509_29537, RNA1509_44101, RNA815_14707} |
| 6. | MligTC455_43021 | 837 | 17.43 | Mlig455_006334 | Neo: - Age: - Region-enriched R4: 1.971/0.00562 |
RAB35 | 1.709 | - | - | - | 0.754 | - | 0.955 | Mlig455_006334 {REF} {Length: 2734} {Pfam: Ras family [PF00071.24, score=200.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.5]; ADP-ribosylation factor family [PF00025.23, score=55.4]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; RsgA GTPase [PF03193.18, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.4]; Gtr1/RagA G protein conserved region [PF04670.14, score=20.3]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Dmel: FBgn0031090, Rab35, [RH, Score=236, Expect=3e-79]} {Celegans: WBGene00004284, rab-35, RAB family, [RH, Score=232, Expect=9e-78]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=209, Expect=6e-69]} {RNA1509_19785, RNA1509_46148} {RNA1310_25273, RNA1509_46148} {RNA1509_46148, RNA815_11011.1} |
| 7. | MligTC455_34183 | 1314 | 27.37 | Mlig455_049237 | Neo: - Age: logFC(26M/2M)=0.606 |
POLR2E | 0.98 | - | - | - | - | - | 0.980 | Mlig455_049237 {REF} {Length: 3214} {TRANSSPLICED} {Pfam: RNA polymerase Rpb5, N-terminal domain [PF03871.16, score=102.8]; RNA polymerase Rpb5, C-terminal domain [PF01191.21, score=41.5]} {Human: ENSG00000099817, POLR2E, RNA polymerase II subunit E, [Score=231, Expect=8e-74]} {Mouse: ENSMUSG00000004667, Polr2e, polymerase (RNA) II (DNA directed) polypeptide E, [Score=236, Expect=5e-76]} {Dmel: FBgn0033571, Rpb5, [Score=241, Expect=2e-78]} {Celegans: WBGene00019246, rpb-5, DNA-directed RNA polymerases I, II, and III subunit RPABC1, [Score=219, Expect=6e-70]} {Smed: dd_Smed_v6_6572_0_1, dd_Smed_v6_6572_0_1, [Score=150, Expect=3e-43]} {RNA1509_11560} {RNA1310_13303} {RNA815_11849.1} |
| 8. | MligTC455_34182 | 1366 | 28.46 | Mlig455_011091 | Neo: - Age: Up-Down-Up |
0.979 | - | - | - | - | - | 0.979 | Mlig455_011091 {REF} {Length: 2742} {TRANSSPLICED} {RNA1509_11560, RNA1509_31926, RNA1509_49865} {RNA1310_13303, RNA1509_11560, RNA1509_31926, RNA1509_49865} {RNA1509_11560, RNA1509_31926, RNA1509_49865, RNA815_11849.1} | |
| 9. | MligTC455_43438 | 932 | 19.41 | Mlig455_006893, Mlig455_017898, Mlig455_017907 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.407 Region-enriched R5: 1.337/0.01327 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_006893 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0203) [PF05254.14, score=68.1]; Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=19.3]} {Dmel: FBgn0050108, CG30108, [RH, Score=64.3, Expect=6e-15]} {Smed: dd_Smed_v6_8954_0_1, dd_Smed_v6_8954_0_1, [RH, Score=60.5, Expect=1e-13]} {RNA1509_30732, RNA1509_46681, RNA1509_50375} {RNA1310_43918.1, RNA1509_30732, RNA1509_46681, RNA1509_50375} {RNA1509_30732, RNA1509_46681, RNA1509_50375, RNA815_36663} Mlig455_017898 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0203) [PF05254.14, score=68.1]; Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=19.3]} {Dmel: FBgn0050108, CG30108, [RH, Score=64.3, Expect=6e-15]} {Smed: dd_Smed_v6_8954_0_1, dd_Smed_v6_8954_0_1, [RH, Score=60.1, Expect=1e-13]} {RNA1509_32774} {RNA1310_43918.1} {RNA815_36663} Mlig455_017907 {REF} {Length: 940} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0203) [PF05254.14, score=68.1]; Ubiquinol-cytochrome C reductase hinge protein [PF02320.18, score=19.3]} {Dmel: FBgn0050108, CG30108, [RH, Score=64.3, Expect=6e-15]} {Smed: dd_Smed_v6_8954_0_1, dd_Smed_v6_8954_0_1, [RH, Score=60.1, Expect=1e-13]} {RNA1509_32774} {RNA1310_43918.1, RNA1509_32774} {RNA1509_32774, RNA815_36663} |
|
| 10. | MligTC455_46504 | 1321 | 27.52 | Mlig455_022424, Mlig455_031778 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_022424 {REF} {Length: 3061} {TRANSSPLICED} {RNA1509_14897} {RNA1310_18938} {RNA815_5554.1} Mlig455_031778 {REF} {Length: 3058} {TRANSSPLICED} {RNA1509_12077, RNA1509_14897, RNA1509_40842} {RNA1310_18938, RNA1509_12077, RNA1509_14897, RNA1509_40842} {RNA1509_12077, RNA1509_14897, RNA1509_40842, RNA815_5554.1} |
|
| 11. | MligTC455_13252 | 756 | 15.76 | Mlig455_000483 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.414/0.00198 |
PRMT5 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_000483 {REF} {Length: 2673} {TRANSSPLICED} {Pfam: PRMT5 TIM barrel domain [PF17285.4, score=194.3]; PRMT5 arginine-N-methyltransferase [PF05185.18, score=193.0]; PRMT5 oligomerisation domain [PF17286.4, score=155.4]} {Human: ENSG00000100462, PRMT5, protein arginine methyltransferase 5, [RH, Score=528, Expect=3e-180]} {Mouse: ENSMUSG00000023110, Prmt5, protein arginine N-methyltransferase 5, [RH, Score=521, Expect=2e-177]} {Dmel: FBgn0015925, csul, capsuleen, [RH, Score=356, Expect=8e-114]} {Celegans: WBGene00016408, prmt-5, Protein arginine N-methyltransferase 5, [RH, Score=286, Expect=4e-86]} {Smed: dd_Smed_v6_8688_0_1, dd_Smed_v6_8688_0_1, [RH, Score=466, Expect=6e-156]} {RNA1509_6180} {RNA1310_7540.1} {RNA815_6900} |
| 12. | MligTC455_20308 | 614 | 12.79 | Mlig455_022336 | Neo: - Age: - |
PLPP1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_022336 {REF} {Length: 2324} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=92.7]} {Human: ENSG00000067113, PLPP1, phospholipid phosphatase 1, [Score=131, Expect=2e-35]; ENSG00000141934, PLPP2, phospholipid phosphatase 2, [Score=128, Expect=3e-34]} {Mouse: ENSMUSG00000021759, Plpp1, phospholipid phosphatase 1, [RH, Score=134, Expect=8e-37]} {Dmel: FBgn0037166, CG11426, [RH, Score=137, Expect=2e-37]} {Celegans: WBGene00018756, F53C3.13, [Score=125, Expect=3e-33]} {Smed: dd_Smed_v6_1907_0_1, dd_Smed_v6_1907_0_1, [Score=120, Expect=1e-31]} {RNA1509_45886, RNA1509_5086} {RNA1310_10493.1, RNA1509_45886, RNA1509_5086} {RNA1509_45886, RNA1509_5086, RNA815_8680.2} |
| 13. | MligTC455_19482 | 2713 | 56.53 | Mlig455_063132 | Neo: - Age: Down-Up-Down |
0.953 | - | - | - | - | - | 0.953 | Mlig455_063132 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=66.4]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=26.1]} {Dmel: FBgn0033032, kune, kune-kune, [Score=91.7, Expect=5e-22]} {Smed: dd_Smed_v6_2132_0_1, dd_Smed_v6_2132_0_1, [RH, Score=202, Expect=3e-65]} {RNA1509_28322} {RNA1310_21794} {RNA815_19781} | |
| 14. | MligTC455_43022 | 1772 | 36.91 | Mlig455_006338, Mlig455_061233 | Neo: - Age: - Region-enriched R5: 1.963/0.00031 |
RAB35 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_006338 {REF} {Length: 3641} {Pfam: Ras family [PF00071.24, score=201.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=120.4]; ADP-ribosylation factor family [PF00025.23, score=55.1]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; RsgA GTPase [PF03193.18, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.5]; Gtr1/RagA G protein conserved region [PF04670.14, score=20.3]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [RH, Score=249, Expect=2e-84]} {Dmel: FBgn0031090, Rab35, [RH, Score=236, Expect=3e-79]} {Celegans: WBGene00004284, rab-35, RAB family, [RH, Score=233, Expect=6e-78]} {Smed: dd_Smed_v6_854_0_8, dd_Smed_v6_854_0_8, [Score=211, Expect=1e-69]} {RNA1509_17024, RNA1509_19785} {RNA1310_25273, RNA1509_17024} {RNA1509_17024, RNA815_11011.1} Mlig455_061233 {REF} {Length: 3852} {Pfam: Ras family [PF00071.24, score=187.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=106.1]; ADP-ribosylation factor family [PF00025.23, score=47.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.9]; 50S ribosome-binding GTPase [PF01926.25, score=20.1]} {Human: ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=222, Expect=1e-73]} {Mouse: ENSMUSG00000029518, Rab35, RAB35, member RAS oncogene family, [Score=222, Expect=7e-74]} {Dmel: FBgn0031090, Rab35, [RH, Score=210, Expect=2e-69]} {Celegans: WBGene00004284, rab-35, RAB family, [Score=203, Expect=1e-66]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=188, Expect=6e-61]} {RNA1509_19785} {RNA1310_25273} {RNA815_11011.1} |
Berezikov Lab - 2020-2021 © ERIBA